RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 NRN1Q9NPD7 142 aa13.68□□□□□ -0.22
H3F3B-206ENST00000587560 MAP1LC3B2A6NCE7 125 aa13.67□□□□□ -0.22
H3F3B-206ENST00000587560 GCHFRP30047 84 aa13.67□□□□□ -0.22
H3F3B-206ENST00000587560 LCN12Q6JVE5 192 aa13.67□□□□□ -0.22
H3F3B-206ENST00000587560 LYPD6BQ8NI32 183 aa13.67□□□□□ -0.22
H3F3B-206ENST00000587560 MAP1LC3BQ9GZQ8 125 aa13.67□□□□□ -0.22
H3F3B-206ENST00000587560 TRBV19A0A075B6N1 114 aa13.66□□□□□ -0.22
H3F3B-206ENST00000587560 TRAV8-2A0A0B4J237 113 aa13.66□□□□□ -0.22
H3F3B-206ENST00000587560 ZNF253O75346 499 aa13.66□□□□□ -0.22
H3F3B-206ENST00000587560 NDUFB4O95168 129 aa13.66□□□□□ -0.22
H3F3B-206ENST00000587560 CXorf1O96002 111 aa13.66□□□□□ -0.22
H3F3B-206ENST00000587560 IFNA7P01567 189 aa13.66□□□□□ -0.22
H3F3B-206ENST00000587560 MEOX2P50222 304 aa13.66□□□□□ -0.22
H3F3B-206ENST00000587560 GUK1Q16774 197 aa13.66□□□□□ -0.22
H3F3B-206ENST00000587560 LCN15Q6UWW0 184 aa13.66□□□□□ -0.22
H3F3B-206ENST00000587560 OR7C2O60412 319 aa13.65□□□□□ -0.22
H3F3B-206ENST00000587560 H2AFB1P0C5Y9 115 aa13.65□□□□□ -0.22
H3F3B-206ENST00000587560 NBEAP1P0C6P0 100 aa13.65□□□□□ -0.22
H3F3B-206ENST00000587560 ATF4P18848 351 aaPredicted RBP13.65□□□□□ -0.22
H3F3B-206ENST00000587560 PDE6HQ13956 83 aa13.65□□□□□ -0.22
H3F3B-206ENST00000587560 KPRPQ5T749 579 aaPredicted RBP13.65□□□□□ -0.22
H3F3B-206ENST00000587560 RBPMS2Q6ZRY4 209 aaKnown RBP13.65□□□□□ -0.22
H3F3B-206ENST00000587560 ZNF705EA8MWA4 302 aaPredicted RBP13.64□□□□□ -0.23
H3F3B-206ENST00000587560 G3V4G9 280 aa13.64□□□□□ -0.23
H3F3B-206ENST00000587560 SLC17A3O00476 420 aa13.64□□□□□ -0.23
H3F3B-206ENST00000587560 OR10J4P0C629 311 aa13.64□□□□□ -0.23
H3F3B-206ENST00000587560 FGF8P55075 233 aaPredicted RBP13.64□□□□□ -0.23
H3F3B-206ENST00000587560 UBE2L3P68036 154 aaKnown RBP13.64□□□□□ -0.23
H3F3B-206ENST00000587560 GBGT1Q8N5D6 347 aa13.64□□□□□ -0.23
H3F3B-206ENST00000587560 FAM24BQ8N5W8 94 aa13.64□□□□□ -0.23
H3F3B-206ENST00000587560 LRRC20Q8TCA0 184 aa13.64□□□□□ -0.23
H3F3B-206ENST00000587560 SFT2D1Q8WV19 159 aa13.64□□□□□ -0.23
H3F3B-206ENST00000587560 ZNF331Q9NQX6 463 aaPredicted RBP13.64□□□□□ -0.23
H3F3B-206ENST00000587560 C19orf73Q9NVV2 129 aa13.64□□□□□ -0.23
H3F3B-206ENST00000587560 KRTAP10-11P60412 298 aa13.63□□□□□ -0.23
H3F3B-206ENST00000587560 PMS2P11Q13670 270 aa13.63□□□□□ -0.23
H3F3B-206ENST00000587560 FAM110AQ9BQ89 295 aa13.63□□□□□ -0.23
H3F3B-206ENST00000587560 TMPRSS5Q9H3S3 457 aa13.63□□□□□ -0.23
H3F3B-206ENST00000587560 UBQLN2Q9UHD9 624 aa13.63□□□□□ -0.23
H3F3B-206ENST00000587560 IGKV3-7A0A075B6H7 116 aa13.62□□□□□ -0.23
H3F3B-206ENST00000587560 H3BTX0 84 aa13.62□□□□□ -0.23
H3F3B-206ENST00000587560 ISLRO14498 428 aa13.62□□□□□ -0.23
H3F3B-206ENST00000587560 NMBP08949 121 aa13.62□□□□□ -0.23
H3F3B-206ENST00000587560 SNRPCP09234 159 aaKnown RBP13.62□□□□□ -0.23
H3F3B-206ENST00000587560 RPL11P62913 178 aaKnown RBP13.62□□□□□ -0.23
H3F3B-206ENST00000587560 PAFAH1B2P68402 229 aa13.62□□□□□ -0.23
H3F3B-206ENST00000587560 BLOC1S1P78537 153 aa13.62□□□□□ -0.23
H3F3B-206ENST00000587560 CCL20P78556 96 aa13.62□□□□□ -0.23
H3F3B-206ENST00000587560 SAMD13Q5VXD3 122 aa13.62□□□□□ -0.23
H3F3B-206ENST00000587560 SLC50A1Q9BRV3 221 aa13.62□□□□□ -0.23
H3F3B-206ENST00000587560 TMEM167BQ9NRX6 74 aa13.62□□□□□ -0.23
H3F3B-206ENST00000587560 OR4C46A6NHA9 309 aa13.61□□□□□ -0.23
H3F3B-206ENST00000587560 PSMB3P49720 205 aa13.61□□□□□ -0.23
H3F3B-206ENST00000587560 ODF3L2Q3SX64 289 aa13.61□□□□□ -0.23
H3F3B-206ENST00000587560 ZNF767PQ75MW2 155 aa13.61□□□□□ -0.23
H3F3B-206ENST00000587560 C20orf173Q96LM9 149 aa13.61□□□□□ -0.23
H3F3B-206ENST00000587560 DNASE2O00115 360 aaPredicted RBP13.6□□□□□ -0.23
H3F3B-206ENST00000587560 RGS13O14921 159 aa13.6□□□□□ -0.23
H3F3B-206ENST00000587560 HBE1P02100 147 aa13.6□□□□□ -0.23
H3F3B-206ENST00000587560 TFPI2P48307 235 aa13.6□□□□□ -0.23
H3F3B-206ENST00000587560 GUCA2BQ16661 112 aa13.6□□□□□ -0.23
H3F3B-206ENST00000587560 WFDC3Q8IUB2 231 aa13.6□□□□□ -0.23
H3F3B-206ENST00000587560 LYPD1Q8N2G4 141 aa13.6□□□□□ -0.23
H3F3B-206ENST00000587560 BLNKQ8WV28 456 aa13.59□□□□□ -0.23
H3F3B-206ENST00000587560 MAP6D1Q9H9H5 199 aa13.59□□□□□ -0.23
H3F3B-206ENST00000587560 ARL2-SNX15V9GYD0 113 aa13.59□□□□□ -0.23
H3F3B-206ENST00000587560 A0A1W2PRE2 83 aa13.58□□□□□ -0.24
H3F3B-206ENST00000587560 CD7P09564 240 aa13.58□□□□□ -0.24
H3F3B-206ENST00000587560 HLA-DMBP28068 263 aa13.58□□□□□ -0.24
H3F3B-206ENST00000587560 PSG9Q00887 426 aa13.58□□□□□ -0.24
H3F3B-206ENST00000587560 IGFL4Q6B9Z1 124 aa13.58□□□□□ -0.24
H3F3B-206ENST00000587560 Q8N1Y9 231 aa13.58□□□□□ -0.24
H3F3B-206ENST00000587560 MRPL53Q96EL3 112 aaKnown RBP13.58□□□□□ -0.24
H3F3B-206ENST00000587560 C16orf92Q96LL3 132 aa13.58□□□□□ -0.24
H3F3B-206ENST00000587560 CLEC5AQ9NY25 188 aa13.58□□□□□ -0.24
H3F3B-206ENST00000587560 YTHDF2Q9Y5A9 579 aaKnown RBP13.58□□□□□ -0.24
H3F3B-206ENST00000587560 FAM74A7A6NL05 159 aa13.57□□□□□ -0.24
H3F3B-206ENST00000587560 ID1P41134 155 aa13.57□□□□□ -0.24
H3F3B-206ENST00000587560 PSG3Q16557 428 aa13.57□□□□□ -0.24
H3F3B-206ENST00000587560 EXOC3-AS1Q8N2X6 119 aa13.57□□□□□ -0.24
H3F3B-206ENST00000587560 RNF182Q8N6D2 247 aa13.57□□□□□ -0.24
H3F3B-206ENST00000587560 Q9H3A6 140 aa13.57□□□□□ -0.24
H3F3B-206ENST00000587560 OTORQ9NRC9 128 aa13.57□□□□□ -0.24
H3F3B-206ENST00000587560 ZMAT5Q9UDW3 170 aaKnown RBP13.57□□□□□ -0.24
H3F3B-206ENST00000587560 A0A1B0GV50 99 aa13.56□□□□□ -0.24
H3F3B-206ENST00000587560 GGTLC3B5MD39 225 aa13.56□□□□□ -0.24
H3F3B-206ENST00000587560 ZNF688P0C7X2 276 aa13.56□□□□□ -0.24
H3F3B-206ENST00000587560 RANP62826 216 aaKnown RBP13.56□□□□□ -0.24
H3F3B-206ENST00000587560 CCDC28AQ8IWP9 274 aa13.56□□□□□ -0.24
H3F3B-206ENST00000587560 PCNPQ8WW12 178 aaKnown RBP13.56□□□□□ -0.24
H3F3B-206ENST00000587560 TEX46H3BTG2 121 aa13.55□□□□□ -0.24
H3F3B-206ENST00000587560 PPT1P50897 306 aa13.55□□□□□ -0.24
H3F3B-206ENST00000587560 CMC4P56277 68 aaPredicted RBP13.55□□□□□ -0.24
H3F3B-206ENST00000587560 SNRPD3P62318 126 aaKnown RBP13.55□□□□□ -0.24
H3F3B-206ENST00000587560 CLLU1Q5K131 121 aa13.55□□□□□ -0.24
H3F3B-206ENST00000587560 ARL6IP6Q8N6S5 226 aa13.55□□□□□ -0.24
H3F3B-206ENST00000587560 PRELID1Q9Y255 219 aa13.55□□□□□ -0.24
H3F3B-206ENST00000587560 AGRNO00468 2067 aa13.55□□□□□ -0.24
H3F3B-206ENST00000587560 DNAH3Q8TD57 4116 aa13.54□□□□□ -0.24
H3F3B-206ENST00000587560 M0R3E3 92 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms