RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 AAMDCQ9H7C9 122 aa15.25■□□□□ 0.03
TRIM47-204ENST00000587339 IGHV3OR16-13A0A075B7E8 117 aa15.25■□□□□ 0.03
TRIM47-204ENST00000587339 IGHV3-74A0A0B4J1X5 117 aa15.25■□□□□ 0.03
TRIM47-204ENST00000587339 APOHP02749 345 aaPredicted RBP15.25■□□□□ 0.03
TRIM47-204ENST00000587339 ELOBQ15370 118 aa15.25■□□□□ 0.03
TRIM47-204ENST00000587339 ESM1Q9NQ30 184 aa15.25■□□□□ 0.03
TRIM47-204ENST00000587339 KLF12Q9Y4X4 402 aa15.25■□□□□ 0.03
TRIM47-204ENST00000587339 SMAD5-AS1Q9Y6J3 95 aa15.25■□□□□ 0.03
TRIM47-204ENST00000587339 IGHV3-49A0A0A0MS15 119 aa15.24■□□□□ 0.03
TRIM47-204ENST00000587339 PSG9Q00887 426 aa15.24■□□□□ 0.03
TRIM47-204ENST00000587339 TMEM183BQ1AE95 376 aa15.24■□□□□ 0.03
TRIM47-204ENST00000587339 U3KQE9 123 aa15.24■□□□□ 0.03
TRIM47-204ENST00000587339 ZNF320A2RRD8 509 aa15.23■□□□□ 0.03
TRIM47-204ENST00000587339 PPP1R2P9O14990 202 aa15.23■□□□□ 0.03
TRIM47-204ENST00000587339 GALR1P47211 349 aa15.23■□□□□ 0.03
TRIM47-204ENST00000587339 BAGE2Q86Y30 109 aa15.23■□□□□ 0.03
TRIM47-204ENST00000587339 FMC1Q96HJ9 113 aa15.23■□□□□ 0.03
TRIM47-204ENST00000587339 SGK494Q96LW2 274 aa15.23■□□□□ 0.03
TRIM47-204ENST00000587339 ZNF785A8K8V0 405 aa15.22■□□□□ 0.03
TRIM47-204ENST00000587339 IGLV2-8P01709 118 aa15.22■□□□□ 0.03
TRIM47-204ENST00000587339 S100A9P06702 114 aaKnown RBP15.22■□□□□ 0.03
TRIM47-204ENST00000587339 SRD5A1P18405 259 aa15.22■□□□□ 0.03
TRIM47-204ENST00000587339 OR5I1Q13606 314 aa15.22■□□□□ 0.03
TRIM47-204ENST00000587339 RNF152Q8N8N0 203 aa15.22■□□□□ 0.03
TRIM47-204ENST00000587339 MYOZ3Q8TDC0 251 aa15.22■□□□□ 0.03
TRIM47-204ENST00000587339 OTOGQ6ZRI0 2925 aa15.22■□□□□ 0.03
TRIM47-204ENST00000587339 ZNF253O75346 499 aa15.21■□□□□ 0.03
TRIM47-204ENST00000587339 MGST1P10620 155 aaKnown RBP15.21■□□□□ 0.03
TRIM47-204ENST00000587339 GOLT1AQ6ZVE7 132 aa15.21■□□□□ 0.03
TRIM47-204ENST00000587339 NHLRC2Q8NBF2 726 aa15.21■□□□□ 0.03
TRIM47-204ENST00000587339 UBE2E2Q96LR5 201 aa15.21■□□□□ 0.03
TRIM47-204ENST00000587339 LY6G6DO95868 133 aa15.21■□□□□ 0.02
TRIM47-204ENST00000587339 RAB5AP20339 215 aa15.21■□□□□ 0.02
TRIM47-204ENST00000587339 S100PP25815 95 aa15.21■□□□□ 0.02
TRIM47-204ENST00000587339 ERVFC1-1P60608 527 aa15.21■□□□□ 0.02
TRIM47-204ENST00000587339 Q6ZSV7 163 aa15.21■□□□□ 0.02
TRIM47-204ENST00000587339 KLHDC1Q8N7A1 406 aa15.21■□□□□ 0.02
TRIM47-204ENST00000587339 OR10G8Q8NGN5 311 aa15.21■□□□□ 0.02
TRIM47-204ENST00000587339 A0A087X0K7 114 aa15.2■□□□□ 0.02
TRIM47-204ENST00000587339 M0R3E3 92 aa15.2■□□□□ 0.02
TRIM47-204ENST00000587339 GCGP01275 180 aa15.2■□□□□ 0.02
TRIM47-204ENST00000587339 CRYBA1P05813 215 aa15.2■□□□□ 0.02
TRIM47-204ENST00000587339 FAM106AQ4KMX7 169 aa15.2■□□□□ 0.02
TRIM47-204ENST00000587339 TGIF2-C20orf24A0A0A6YYL0 155 aa15.19■□□□□ 0.02
TRIM47-204ENST00000587339 K7EQM0 130 aa15.19■□□□□ 0.02
TRIM47-204ENST00000587339 LGALS1P09382 135 aaKnown RBP15.19■□□□□ 0.02
TRIM47-204ENST00000587339 ZNF331Q9NQX6 463 aaPredicted RBP15.19■□□□□ 0.02
TRIM47-204ENST00000587339 CXCL1P09341 107 aa15.19■□□□□ 0.02
TRIM47-204ENST00000587339 CSN1S1P47710 185 aa15.19■□□□□ 0.02
TRIM47-204ENST00000587339 C16orf54Q6UWD8 224 aa15.19■□□□□ 0.02
TRIM47-204ENST00000587339 GPHB5Q86YW7 130 aa15.19■□□□□ 0.02
TRIM47-204ENST00000587339 ZNF418Q8TF45 676 aaPredicted RBP15.19■□□□□ 0.02
TRIM47-204ENST00000587339 SMIM12Q96EX1 92 aa15.19■□□□□ 0.02
TRIM47-204ENST00000587339 DAZ1Q9NQZ3 744 aaKnown RBP15.19■□□□□ 0.02
TRIM47-204ENST00000587339 TRAV8-1A0A0A6YYK1 113 aa15.18■□□□□ 0.02
TRIM47-204ENST00000587339 A0A1W2PS18 150 aa15.18■□□□□ 0.02
TRIM47-204ENST00000587339 PFN1P07737 140 aaKnown RBP15.18■□□□□ 0.02
TRIM47-204ENST00000587339 RPEL1Q2QD12 228 aa15.18■□□□□ 0.02
TRIM47-204ENST00000587339 DIRC3C9JPN6 131 aa15.17■□□□□ 0.02
TRIM47-204ENST00000587339 LTAP01374 205 aa15.17■□□□□ 0.02
TRIM47-204ENST00000587339 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.17■□□□□ 0.02
TRIM47-204ENST00000587339 GLMPQ8WWB7 406 aa15.17■□□□□ 0.02
TRIM47-204ENST00000587339 GRAMD2BQ96HH9 432 aa15.17■□□□□ 0.02
TRIM47-204ENST00000587339 RNASE1P07998 156 aaKnown RBP15.17■□□□□ 0.02
TRIM47-204ENST00000587339 FOLR2P14207 255 aa15.17■□□□□ 0.02
TRIM47-204ENST00000587339 MEOX2P50222 304 aa15.17■□□□□ 0.02
TRIM47-204ENST00000587339 KCNIP4Q6PIL6 250 aa15.17■□□□□ 0.02
TRIM47-204ENST00000587339 TMEM75Q8N9X5 138 aa15.17■□□□□ 0.02
TRIM47-204ENST00000587339 RNASE7Q9H1E1 156 aaKnown RBP15.17■□□□□ 0.02
TRIM47-204ENST00000587339 TRBV24-1A0A075B6N3 115 aa15.16■□□□□ 0.02
TRIM47-204ENST00000587339 IGLV2-11P01706 119 aa15.16■□□□□ 0.02
TRIM47-204ENST00000587339 TM4SF20Q53R12 229 aa15.16■□□□□ 0.02
TRIM47-204ENST00000587339 IBA57Q5T440 356 aaKnown RBP15.16■□□□□ 0.02
TRIM47-204ENST00000587339 Q86TA4 180 aa15.16■□□□□ 0.02
TRIM47-204ENST00000587339 ARL6IP6Q8N6S5 226 aa15.16■□□□□ 0.02
TRIM47-204ENST00000587339 FAM210BQ96KR6 192 aa15.16■□□□□ 0.02
TRIM47-204ENST00000587339 IMMP2LQ96T52 175 aa15.16■□□□□ 0.02
TRIM47-204ENST00000587339 SLC50A1Q9BRV3 221 aa15.16■□□□□ 0.02
TRIM47-204ENST00000587339 OSTCQ9NRP0 149 aa15.16■□□□□ 0.02
TRIM47-204ENST00000587339 MLXQ9UH92 298 aa15.16■□□□□ 0.02
TRIM47-204ENST00000587339 HIVEP2P31629 2446 aa15.16■□□□□ 0.02
TRIM47-204ENST00000587339 SERTM2A0A1B0GWG4 89 aa15.15■□□□□ 0.02
TRIM47-204ENST00000587339 K7EMT4 169 aa15.15■□□□□ 0.02
TRIM47-204ENST00000587339 PSG3Q16557 428 aa15.15■□□□□ 0.02
TRIM47-204ENST00000587339 IGFL4Q6B9Z1 124 aa15.15■□□□□ 0.02
TRIM47-204ENST00000587339 MLST8Q9BVC4 326 aa15.15■□□□□ 0.02
TRIM47-204ENST00000587339 IGHV7-4-1A0A0J9YVY3 117 aa15.15■□□□□ 0.02
TRIM47-204ENST00000587339 A0A1W2PPQ1 181 aa15.15■□□□□ 0.02
TRIM47-204ENST00000587339 PRB4P10163 310 aaPredicted RBP15.15■□□□□ 0.02
TRIM47-204ENST00000587339 RPS10P46783 165 aaKnown RBP15.15■□□□□ 0.02
TRIM47-204ENST00000587339 HILS1P60008 231 aa15.15■□□□□ 0.02
TRIM47-204ENST00000587339 FLI1Q01543 452 aaPredicted RBP15.15■□□□□ 0.02
TRIM47-204ENST00000587339 PRR27Q6MZM9 219 aa15.15■□□□□ 0.02
TRIM47-204ENST00000587339 PRNTQ86SH4 94 aa15.15■□□□□ 0.02
TRIM47-204ENST00000587339 UFC1Q9Y3C8 167 aa15.15■□□□□ 0.02
TRIM47-204ENST00000587339 V9GYV3 84 aa15.15■□□□□ 0.02
TRIM47-204ENST00000587339 CUBNO60494 3623 aa15.15■□□□□ 0.02
TRIM47-204ENST00000587339 C8orf86Q6ZUL3 223 aa15.14■□□□□ 0.01
TRIM47-204ENST00000587339 RHPN1-AS1Q9BWJ2 59 aa15.14■□□□□ 0.01
TRIM47-204ENST00000587339 MTORP42345 2549 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms