RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 DLK1P80370 383 aa13.55□□□□□ -0.24
TRAF4-216ENST00000586813 S100A7AQ86SG5 101 aa13.55□□□□□ -0.24
TRAF4-216ENST00000586813 CCDC190Q86UF4 302 aa13.55□□□□□ -0.24
TRAF4-216ENST00000586813 LRRC20Q8TCA0 184 aa13.55□□□□□ -0.24
TRAF4-216ENST00000586813 SMIM8Q96KF7 97 aa13.55□□□□□ -0.24
TRAF4-216ENST00000586813 ARL6Q9H0F7 186 aa13.55□□□□□ -0.24
TRAF4-216ENST00000586813 K7EPK0 472 aa13.54□□□□□ -0.24
TRAF4-216ENST00000586813 MRPS12O15235 138 aaKnown RBP13.54□□□□□ -0.24
TRAF4-216ENST00000586813 METTL15P1P0C7V9 234 aa13.54□□□□□ -0.24
TRAF4-216ENST00000586813 PRB4P10163 310 aaPredicted RBP13.54□□□□□ -0.24
TRAF4-216ENST00000586813 HTN1P15515 57 aa13.54□□□□□ -0.24
TRAF4-216ENST00000586813 SLC38A11Q08AI6 406 aa13.54□□□□□ -0.24
TRAF4-216ENST00000586813 TMEM14EPQ6UXP3 125 aa13.54□□□□□ -0.24
TRAF4-216ENST00000586813 C6orf223Q8N319 242 aa13.54□□□□□ -0.24
TRAF4-216ENST00000586813 RPUSD4Q96CM3 377 aaKnown RBP13.54□□□□□ -0.24
TRAF4-216ENST00000586813 ARV1Q9H2C2 271 aa13.54□□□□□ -0.24
TRAF4-216ENST00000586813 TIMM8BQ9Y5J9 83 aaPredicted RBP13.54□□□□□ -0.24
TRAF4-216ENST00000586813 LRP1BQ9NZR2 4599 aa13.53□□□□□ -0.24
TRAF4-216ENST00000586813 C16orf90A8MZG2 172 aa13.53□□□□□ -0.24
TRAF4-216ENST00000586813 FNDC10F2Z333 226 aa13.53□□□□□ -0.24
TRAF4-216ENST00000586813 CDKN1BP46527 198 aa13.53□□□□□ -0.24
TRAF4-216ENST00000586813 CCL18P55774 89 aa13.53□□□□□ -0.24
TRAF4-216ENST00000586813 TEPPQ6URK8 271 aa13.53□□□□□ -0.24
TRAF4-216ENST00000586813 PATE2Q6UY27 113 aa13.53□□□□□ -0.24
TRAF4-216ENST00000586813 RNASE8Q8TDE3 154 aaKnown RBP13.53□□□□□ -0.24
TRAF4-216ENST00000586813 RNF141Q8WVD5 230 aa13.53□□□□□ -0.24
TRAF4-216ENST00000586813 NPVFQ9HCQ7 196 aa13.53□□□□□ -0.24
TRAF4-216ENST00000586813 RNF24Q9Y225 148 aa13.53□□□□□ -0.24
TRAF4-216ENST00000586813 LINC00588Q9Y4M8 146 aa13.53□□□□□ -0.24
TRAF4-216ENST00000586813 NDUFB6O95139 128 aa13.52□□□□□ -0.25
TRAF4-216ENST00000586813 CXCL2P19875 107 aa13.52□□□□□ -0.25
TRAF4-216ENST00000586813 ANXA7P20073 488 aaKnown RBP13.52□□□□□ -0.25
TRAF4-216ENST00000586813 OR10P1Q8NGE3 313 aa13.52□□□□□ -0.25
TRAF4-216ENST00000586813 TMEM263Q8WUH6 116 aaKnown RBP13.52□□□□□ -0.25
TRAF4-216ENST00000586813 NOP10Q9NPE3 64 aaKnown RBP13.52□□□□□ -0.25
TRAF4-216ENST00000586813 MGAT4CQ9UBM8 478 aa13.52□□□□□ -0.25
TRAF4-216ENST00000586813 FLVCR2Q9UPI3 526 aa13.52□□□□□ -0.25
TRAF4-216ENST00000586813 CCDC160A6NGH7 325 aa13.51□□□□□ -0.25
TRAF4-216ENST00000586813 OR4E1P0C645 316 aa13.51□□□□□ -0.25
TRAF4-216ENST00000586813 PXDC1Q5TGL8 231 aa13.51□□□□□ -0.25
TRAF4-216ENST00000586813 LCN15Q6UWW0 184 aa13.51□□□□□ -0.25
TRAF4-216ENST00000586813 ZNF493Q6ZR52 646 aa13.51□□□□□ -0.25
TRAF4-216ENST00000586813 SRRQ9GZT4 340 aa13.51□□□□□ -0.25
TRAF4-216ENST00000586813 ZNF331Q9NQX6 463 aaPredicted RBP13.51□□□□□ -0.25
TRAF4-216ENST00000586813 H7BYZ3 331 aa13.5□□□□□ -0.25
TRAF4-216ENST00000586813 TSC22D2O75157 780 aa13.5□□□□□ -0.25
TRAF4-216ENST00000586813 SCGB1D2O95969 90 aa13.5□□□□□ -0.25
TRAF4-216ENST00000586813 CLINT1Q14677 625 aa13.5□□□□□ -0.25
TRAF4-216ENST00000586813 SSX7Q7RTT5 188 aa13.5□□□□□ -0.25
TRAF4-216ENST00000586813 LINC00305Q7Z4B0 112 aa13.5□□□□□ -0.25
TRAF4-216ENST00000586813 ZNF546Q86UE3 836 aa13.5□□□□□ -0.25
TRAF4-216ENST00000586813 SLC50A1Q9BRV3 221 aa13.5□□□□□ -0.25
TRAF4-216ENST00000586813 NAP1L6A6NFF2 107 aa13.49□□□□□ -0.25
TRAF4-216ENST00000586813 GOSR2O14653 212 aa13.49□□□□□ -0.25
TRAF4-216ENST00000586813 CDK2AP2O75956 126 aa13.49□□□□□ -0.25
TRAF4-216ENST00000586813 SNRPCP09234 159 aaKnown RBP13.49□□□□□ -0.25
TRAF4-216ENST00000586813 INPP1P49441 399 aa13.49□□□□□ -0.25
TRAF4-216ENST00000586813 TAS2R30P59541 319 aa13.49□□□□□ -0.25
TRAF4-216ENST00000586813 IAH1Q2TAA2 248 aaPredicted RBP13.49□□□□□ -0.25
TRAF4-216ENST00000586813 SPANXN2Q5MJ10 180 aa13.49□□□□□ -0.25
TRAF4-216ENST00000586813 C20orf144Q9BQM9 153 aa13.49□□□□□ -0.25
TRAF4-216ENST00000586813 RCL1Q9Y2P8 373 aaKnown RBP13.49□□□□□ -0.25
TRAF4-216ENST00000586813 AGPAT2O15120 278 aa13.48□□□□□ -0.25
TRAF4-216ENST00000586813 KIR3DS1Q14943 382 aa13.48□□□□□ -0.25
TRAF4-216ENST00000586813 C4orf46Q504U0 113 aa13.48□□□□□ -0.25
TRAF4-216ENST00000586813 TRIQKQ629K1 86 aa13.48□□□□□ -0.25
TRAF4-216ENST00000586813 OR10J6PQ8NGY7 276 aa13.48□□□□□ -0.25
TRAF4-216ENST00000586813 PARD6GQ9BYG4 376 aaPredicted RBP13.48□□□□□ -0.25
TRAF4-216ENST00000586813 SLC17A3O00476 420 aa13.47□□□□□ -0.25
TRAF4-216ENST00000586813 ARL16Q0P5N6 197 aa13.47□□□□□ -0.25
TRAF4-216ENST00000586813 BAK1Q16611 211 aa13.47□□□□□ -0.25
TRAF4-216ENST00000586813 GFI1BQ5VTD9 330 aa13.47□□□□□ -0.25
TRAF4-216ENST00000586813 BPIFA4PQ86YQ2 179 aa13.47□□□□□ -0.25
TRAF4-216ENST00000586813 LINC00612Q8N6U2 182 aa13.47□□□□□ -0.25
TRAF4-216ENST00000586813 ZBTB8BQ8NAP8 495 aaPredicted RBP13.47□□□□□ -0.25
TRAF4-216ENST00000586813 TRAV26-1A0A087WT03 109 aa13.46□□□□□ -0.25
TRAF4-216ENST00000586813 PRAC2D3DTV9 90 aa13.46□□□□□ -0.25
TRAF4-216ENST00000586813 COX7A2P2O60397 106 aa13.46□□□□□ -0.25
TRAF4-216ENST00000586813 M6PRP20645 277 aa13.46□□□□□ -0.25
TRAF4-216ENST00000586813 OR5I1Q13606 314 aa13.46□□□□□ -0.25
TRAF4-216ENST00000586813 MORN5Q5VZ52 161 aa13.46□□□□□ -0.25
TRAF4-216ENST00000586813 GNPNAT1Q96EK6 184 aaPredicted RBP13.46□□□□□ -0.25
TRAF4-216ENST00000586813 MGST2Q99735 147 aa13.46□□□□□ -0.25
TRAF4-216ENST00000586813 GGACTQ9BVM4 153 aa13.46□□□□□ -0.25
TRAF4-216ENST00000586813 H3BTX0 84 aa13.45□□□□□ -0.26
TRAF4-216ENST00000586813 IGLC2P0DOY2 106 aa13.45□□□□□ -0.26
TRAF4-216ENST00000586813 BTCP35070 178 aa13.45□□□□□ -0.26
TRAF4-216ENST00000586813 CCDC28AQ8IWP9 274 aa13.45□□□□□ -0.26
TRAF4-216ENST00000586813 TMEM37Q8WXS4 190 aa13.45□□□□□ -0.26
TRAF4-216ENST00000586813 ZNF503Q96F45 646 aa13.45□□□□□ -0.26
TRAF4-216ENST00000586813 Q9H8V8 135 aa13.45□□□□□ -0.26
TRAF4-216ENST00000586813 GSKIPQ9P0R6 139 aa13.45□□□□□ -0.26
TRAF4-216ENST00000586813 APOBP04114 4563 aaKnown RBP13.45□□□□□ -0.26
TRAF4-216ENST00000586813 LINC00854A0A1B0GVQ3 168 aa13.44□□□□□ -0.26
TRAF4-216ENST00000586813 C7orf66A4D0T2 115 aa13.44□□□□□ -0.26
TRAF4-216ENST00000586813 ZNF701M0R085 212 aaPredicted RBP13.44□□□□□ -0.26
TRAF4-216ENST00000586813 HOXA5P20719 270 aa13.44□□□□□ -0.26
TRAF4-216ENST00000586813 OPCMLQ14982 345 aa13.44□□□□□ -0.26
TRAF4-216ENST00000586813 TTC32Q5I0X7 151 aa13.44□□□□□ -0.26
TRAF4-216ENST00000586813 C10orf113Q5VZT2 155 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms