RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 MAP1LC3BQ9GZQ8 125 aa12.71□□□□□ -0.37
PRKCSH-203ENST00000586486 DNASE2O00115 360 aaPredicted RBP12.7□□□□□ -0.38
PRKCSH-203ENST00000586486 ZNF253O75346 499 aa12.7□□□□□ -0.38
PRKCSH-203ENST00000586486 PDE6HQ13956 83 aa12.7□□□□□ -0.38
PRKCSH-203ENST00000586486 KPRPQ5T749 579 aaPredicted RBP12.7□□□□□ -0.38
PRKCSH-203ENST00000586486 GBGT1Q8N5D6 347 aa12.7□□□□□ -0.38
PRKCSH-203ENST00000586486 ZNF680Q8NEM1 530 aa12.7□□□□□ -0.38
PRKCSH-203ENST00000586486 ZNF586Q9NXT0 402 aa12.7□□□□□ -0.38
PRKCSH-203ENST00000586486 TRBV19A0A075B6N1 114 aa12.7□□□□□ -0.38
PRKCSH-203ENST00000586486 IFNA7P01567 189 aa12.7□□□□□ -0.38
PRKCSH-203ENST00000586486 OR10J4P0C629 311 aa12.7□□□□□ -0.38
PRKCSH-203ENST00000586486 SUN5Q8TC36 379 aa12.7□□□□□ -0.38
PRKCSH-203ENST00000586486 SAT2Q96F10 170 aaPredicted RBP12.7□□□□□ -0.38
PRKCSH-203ENST00000586486 SORL1Q92673 2214 aa12.69□□□□□ -0.38
PRKCSH-203ENST00000586486 ISLRO14498 428 aa12.69□□□□□ -0.38
PRKCSH-203ENST00000586486 H2AFB1P0C5Y9 115 aa12.69□□□□□ -0.38
PRKCSH-203ENST00000586486 NBEAP1P0C6P0 100 aa12.69□□□□□ -0.38
PRKCSH-203ENST00000586486 GCHFRP30047 84 aa12.69□□□□□ -0.38
PRKCSH-203ENST00000586486 SLC50A1Q9BRV3 221 aa12.69□□□□□ -0.38
PRKCSH-203ENST00000586486 TRAV1-1A0A0B4J248 108 aa12.68□□□□□ -0.38
PRKCSH-203ENST00000586486 ZNF705EA8MWA4 302 aaPredicted RBP12.68□□□□□ -0.38
PRKCSH-203ENST00000586486 TFPI2P48307 235 aa12.68□□□□□ -0.38
PRKCSH-203ENST00000586486 PSMB3P49720 205 aa12.68□□□□□ -0.38
PRKCSH-203ENST00000586486 KRTAP10-11P60412 298 aa12.68□□□□□ -0.38
PRKCSH-203ENST00000586486 LRRC20Q8TCA0 184 aa12.68□□□□□ -0.38
PRKCSH-203ENST00000586486 SFT2D1Q8WV19 159 aa12.68□□□□□ -0.38
PRKCSH-203ENST00000586486 ZNF331Q9NQX6 463 aaPredicted RBP12.68□□□□□ -0.38
PRKCSH-203ENST00000586486 TMEM167BQ9NRX6 74 aa12.68□□□□□ -0.38
PRKCSH-203ENST00000586486 SLC17A3O00476 420 aa12.67□□□□□ -0.38
PRKCSH-203ENST00000586486 WFDC3Q8IUB2 231 aa12.67□□□□□ -0.38
PRKCSH-203ENST00000586486 C16orf92Q96LL3 132 aa12.67□□□□□ -0.38
PRKCSH-203ENST00000586486 FAM110AQ9BQ89 295 aa12.67□□□□□ -0.38
PRKCSH-203ENST00000586486 UBQLN2Q9UHD9 624 aa12.67□□□□□ -0.38
PRKCSH-203ENST00000586486 NDUFB4O95168 129 aa12.66□□□□□ -0.38
PRKCSH-203ENST00000586486 SNRPCP09234 159 aaKnown RBP12.66□□□□□ -0.38
PRKCSH-203ENST00000586486 ID1P41134 155 aa12.66□□□□□ -0.38
PRKCSH-203ENST00000586486 FGF8P55075 233 aaPredicted RBP12.66□□□□□ -0.38
PRKCSH-203ENST00000586486 SNRPD3P62318 126 aaKnown RBP12.66□□□□□ -0.38
PRKCSH-203ENST00000586486 BLOC1S1P78537 153 aa12.66□□□□□ -0.38
PRKCSH-203ENST00000586486 FAM24BQ8N5W8 94 aa12.66□□□□□ -0.38
PRKCSH-203ENST00000586486 BLNKQ8WV28 456 aa12.66□□□□□ -0.38
PRKCSH-203ENST00000586486 CLEC5AQ9NY25 188 aa12.66□□□□□ -0.38
PRKCSH-203ENST00000586486 NBEAL1Q6ZS30 2694 aa12.66□□□□□ -0.38
PRKCSH-203ENST00000586486 TRAV8-2A0A0B4J237 113 aa12.66□□□□□ -0.38
PRKCSH-203ENST00000586486 TEX46H3BTG2 121 aa12.66□□□□□ -0.38
PRKCSH-203ENST00000586486 H3BTX0 84 aa12.66□□□□□ -0.38
PRKCSH-203ENST00000586486 HBE1P02100 147 aa12.66□□□□□ -0.38
PRKCSH-203ENST00000586486 CMC4P56277 68 aaPredicted RBP12.66□□□□□ -0.38
PRKCSH-203ENST00000586486 PSG9Q00887 426 aa12.66□□□□□ -0.38
PRKCSH-203ENST00000586486 GTSCR1Q86UQ5 136 aa12.66□□□□□ -0.38
PRKCSH-203ENST00000586486 LYPD1Q8N2G4 141 aa12.66□□□□□ -0.38
PRKCSH-203ENST00000586486 ODF3L2Q3SX64 289 aa12.65□□□□□ -0.38
PRKCSH-203ENST00000586486 MAP6D1Q9H9H5 199 aa12.65□□□□□ -0.38
PRKCSH-203ENST00000586486 CD7P09564 240 aa12.64□□□□□ -0.39
PRKCSH-203ENST00000586486 ZNF688P0C7X2 276 aa12.64□□□□□ -0.39
PRKCSH-203ENST00000586486 CD81P60033 236 aa12.64□□□□□ -0.39
PRKCSH-203ENST00000586486 IFITM2Q01629 132 aa12.64□□□□□ -0.39
PRKCSH-203ENST00000586486 IQCF2Q8IXL9 164 aa12.64□□□□□ -0.39
PRKCSH-203ENST00000586486 TMPRSS5Q9H3S3 457 aa12.64□□□□□ -0.39
PRKCSH-203ENST00000586486 C19orf73Q9NVV2 129 aa12.64□□□□□ -0.39
PRKCSH-203ENST00000586486 NOTCH1P46531 2555 aa12.64□□□□□ -0.39
PRKCSH-203ENST00000586486 ZNF767PQ75MW2 155 aa12.63□□□□□ -0.39
PRKCSH-203ENST00000586486 LYPD6BQ8NI32 183 aa12.63□□□□□ -0.39
PRKCSH-203ENST00000586486 ARL2-SNX15V9GYD0 113 aa12.63□□□□□ -0.39
PRKCSH-203ENST00000586486 OR11H12B2RN74 326 aa12.62□□□□□ -0.39
PRKCSH-203ENST00000586486 PSMG4Q5JS54 123 aa12.62□□□□□ -0.39
PRKCSH-203ENST00000586486 RNF182Q8N6D2 247 aa12.62□□□□□ -0.39
PRKCSH-203ENST00000586486 MRPL53Q96EL3 112 aaKnown RBP12.62□□□□□ -0.39
PRKCSH-203ENST00000586486 PRR25Q96S07 402 aa12.62□□□□□ -0.39
PRKCSH-203ENST00000586486 AAMDCQ9H7C9 122 aa12.62□□□□□ -0.39
PRKCSH-203ENST00000586486 A0A1B0GV50 99 aa12.62□□□□□ -0.39
PRKCSH-203ENST00000586486 A0A1W2PRE2 83 aa12.62□□□□□ -0.39
PRKCSH-203ENST00000586486 PPT1P50897 306 aa12.62□□□□□ -0.39
PRKCSH-203ENST00000586486 RANP62826 216 aaKnown RBP12.62□□□□□ -0.39
PRKCSH-203ENST00000586486 PMS2P11Q13670 270 aa12.62□□□□□ -0.39
PRKCSH-203ENST00000586486 PSG3Q16557 428 aa12.62□□□□□ -0.39
PRKCSH-203ENST00000586486 Q8N1Y9 231 aa12.62□□□□□ -0.39
PRKCSH-203ENST00000586486 C20orf173Q96LM9 149 aa12.62□□□□□ -0.39
PRKCSH-203ENST00000586486 Q9H3A6 140 aa12.62□□□□□ -0.39
PRKCSH-203ENST00000586486 OTORQ9NRC9 128 aa12.62□□□□□ -0.39
PRKCSH-203ENST00000586486 PRELID1Q9Y255 219 aa12.62□□□□□ -0.39
PRKCSH-203ENST00000586486 HLA-DMBP28068 263 aa12.61□□□□□ -0.39
PRKCSH-203ENST00000586486 DEFB131AP59861 70 aa12.61□□□□□ -0.39
PRKCSH-203ENST00000586486 CCL20P78556 96 aa12.61□□□□□ -0.39
PRKCSH-203ENST00000586486 IGFL4Q6B9Z1 124 aa12.61□□□□□ -0.39
PRKCSH-203ENST00000586486 EXOC3-AS1Q8N2X6 119 aa12.61□□□□□ -0.39
PRKCSH-203ENST00000586486 LINC00052Q96N35 136 aa12.61□□□□□ -0.39
PRKCSH-203ENST00000586486 DNAH3Q8TD57 4116 aa12.61□□□□□ -0.39
PRKCSH-203ENST00000586486 NMBP08949 121 aa12.6□□□□□ -0.39
PRKCSH-203ENST00000586486 ICAM4Q14773 271 aa12.6□□□□□ -0.39
PRKCSH-203ENST00000586486 NKX6-2Q9C056 277 aaPredicted RBP12.6□□□□□ -0.39
PRKCSH-203ENST00000586486 MANBALQ9NQG1 85 aa12.6□□□□□ -0.39
PRKCSH-203ENST00000586486 FAM74A7A6NL05 159 aa12.59□□□□□ -0.39
PRKCSH-203ENST00000586486 ARL6IP6Q8N6S5 226 aa12.59□□□□□ -0.39
PRKCSH-203ENST00000586486 YTHDF2Q9Y5A9 579 aaKnown RBP12.59□□□□□ -0.39
PRKCSH-203ENST00000586486 GGTLC3B5MD39 225 aa12.59□□□□□ -0.39
PRKCSH-203ENST00000586486 ZNF738Q8NE65 137 aa12.59□□□□□ -0.39
PRKCSH-203ENST00000586486 RPUSD4Q96CM3 377 aaKnown RBP12.59□□□□□ -0.39
PRKCSH-203ENST00000586486 M0R3E3 92 aa12.58□□□□□ -0.4
PRKCSH-203ENST00000586486 UBE2G2P60604 165 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms