RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 BCL6BQ8N143 479 aaPredicted RBP9.82□□□□□ -0.84
SMARCA4-208ENST00000585799 ZNF738Q8NE65 137 aa9.82□□□□□ -0.84
SMARCA4-208ENST00000585799 C11orf52Q96A22 123 aa9.82□□□□□ -0.84
SMARCA4-208ENST00000585799 SHANK2-AS3Q9BTD1 123 aa9.82□□□□□ -0.84
SMARCA4-208ENST00000585799 MOB4Q9Y3A3 225 aa9.82□□□□□ -0.84
SMARCA4-208ENST00000585799 UFC1Q9Y3C8 167 aa9.82□□□□□ -0.84
SMARCA4-208ENST00000585799 V9GYV3 84 aa9.82□□□□□ -0.84
SMARCA4-208ENST00000585799 COL12A1Q99715 3063 aa9.82□□□□□ -0.84
SMARCA4-208ENST00000585799 TACC2O95359 2948 aa9.81□□□□□ -0.84
SMARCA4-208ENST00000585799 IGHV1-69DA0A0B4J2H0 117 aa9.81□□□□□ -0.84
SMARCA4-208ENST00000585799 NPIPB5A8MRT5 1133 aa9.81□□□□□ -0.84
SMARCA4-208ENST00000585799 IGKV3-20P01619 116 aa9.81□□□□□ -0.84
SMARCA4-208ENST00000585799 IGHV1-69P01742 117 aa9.81□□□□□ -0.84
SMARCA4-208ENST00000585799 ACTL10Q5JWF8 245 aa9.81□□□□□ -0.84
SMARCA4-208ENST00000585799 FMC1Q96HJ9 113 aa9.81□□□□□ -0.84
SMARCA4-208ENST00000585799 ANKRD17O75179 2603 aaKnown RBP9.81□□□□□ -0.84
SMARCA4-208ENST00000585799 IZUMO1RA6ND01 250 aa9.81□□□□□ -0.84
SMARCA4-208ENST00000585799 MSMBP08118 114 aa9.81□□□□□ -0.84
SMARCA4-208ENST00000585799 GLMPQ8WWB7 406 aa9.81□□□□□ -0.84
SMARCA4-208ENST00000585799 RELNP78509 3460 aa9.81□□□□□ -0.84
SMARCA4-208ENST00000585799 TOMM40O96008 361 aa9.81□□□□□ -0.84
SMARCA4-208ENST00000585799 PIP4P2Q8N4L2 257 aa9.81□□□□□ -0.84
SMARCA4-208ENST00000585799 NUP35Q8NFH5 326 aa9.81□□□□□ -0.84
SMARCA4-208ENST00000585799 WFDC12Q8WWY7 111 aa9.81□□□□□ -0.84
SMARCA4-208ENST00000585799 C2CD3Q4AC94 2353 aa9.8□□□□□ -0.84
SMARCA4-208ENST00000585799 TMEM249Q2WGJ8 235 aa9.8□□□□□ -0.84
SMARCA4-208ENST00000585799 Q8N9W7 124 aa9.8□□□□□ -0.84
SMARCA4-208ENST00000585799 CFHR4Q92496 578 aa9.8□□□□□ -0.84
SMARCA4-208ENST00000585799 TXN2Q99757 166 aa9.8□□□□□ -0.84
SMARCA4-208ENST00000585799 B4DSR2 109 aa9.8□□□□□ -0.84
SMARCA4-208ENST00000585799 TCTAP57738 103 aa9.8□□□□□ -0.84
SMARCA4-208ENST00000585799 RIGQ13278 110 aa9.8□□□□□ -0.84
SMARCA4-208ENST00000585799 FBLN7Q53RD9 439 aa9.8□□□□□ -0.84
SMARCA4-208ENST00000585799 FA2HQ7L5A8 372 aa9.8□□□□□ -0.84
SMARCA4-208ENST00000585799 RNF182Q8N6D2 247 aa9.8□□□□□ -0.84
SMARCA4-208ENST00000585799 VAMP8Q9BV40 100 aa9.8□□□□□ -0.84
SMARCA4-208ENST00000585799 SIRPDQ9H106 197 aa9.8□□□□□ -0.84
SMARCA4-208ENST00000585799 M0QZ24 198 aa9.8□□□□□ -0.84
SMARCA4-208ENST00000585799 HTN1P15515 57 aa9.8□□□□□ -0.84
SMARCA4-208ENST00000585799 TMEM78Q5T7P6 136 aa9.8□□□□□ -0.84
SMARCA4-208ENST00000585799 SMIM15Q7Z3B0 74 aa9.8□□□□□ -0.84
SMARCA4-208ENST00000585799 TWIST1Q15672 202 aa9.79□□□□□ -0.84
SMARCA4-208ENST00000585799 TMEM183BQ1AE95 376 aa9.79□□□□□ -0.84
SMARCA4-208ENST00000585799 COX19Q49B96 90 aa9.79□□□□□ -0.84
SMARCA4-208ENST00000585799 F2Z2F3 143 aa9.79□□□□□ -0.84
SMARCA4-208ENST00000585799 HBBP68871 147 aa9.79□□□□□ -0.84
SMARCA4-208ENST00000585799 PSG9Q00887 426 aa9.79□□□□□ -0.84
SMARCA4-208ENST00000585799 TMEM95Q3KNT9 176 aa9.79□□□□□ -0.84
SMARCA4-208ENST00000585799 C11orf44Q8N8P7 122 aa9.79□□□□□ -0.84
SMARCA4-208ENST00000585799 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.79□□□□□ -0.84
SMARCA4-208ENST00000585799 LY6LH3BQJ8 138 aa9.79□□□□□ -0.84
SMARCA4-208ENST00000585799 BLCAPP62952 87 aa9.79□□□□□ -0.84
SMARCA4-208ENST00000585799 FANCD2OSQ96PS1 177 aa9.79□□□□□ -0.84
SMARCA4-208ENST00000585799 DIRC3C9JPN6 131 aa9.78□□□□□ -0.84
SMARCA4-208ENST00000585799 CRYGBP07316 175 aa9.78□□□□□ -0.84
SMARCA4-208ENST00000585799 C1orf122Q6ZSJ8 110 aa9.78□□□□□ -0.84
SMARCA4-208ENST00000585799 TRBV19A0A075B6N1 114 aa9.78□□□□□ -0.84
SMARCA4-208ENST00000585799 ERCC8Q13216 396 aa9.78□□□□□ -0.84
SMARCA4-208ENST00000585799 TSKUQ8WUA8 353 aa9.78□□□□□ -0.84
SMARCA4-208ENST00000585799 JMJD1CQ15652 2540 aa9.78□□□□□ -0.84
SMARCA4-208ENST00000585799 TMEM8BA6NDV4 472 aa9.78□□□□□ -0.84
SMARCA4-208ENST00000585799 PMCHL1Q16048 86 aa9.78□□□□□ -0.84
SMARCA4-208ENST00000585799 DMRT1Q9Y5R6 373 aa9.78□□□□□ -0.84
SMARCA4-208ENST00000585799 CRYGCP07315 174 aa9.77□□□□□ -0.84
SMARCA4-208ENST00000585799 PAX8Q06710 450 aa9.77□□□□□ -0.84
SMARCA4-208ENST00000585799 C8orf49Q96NF6 230 aa9.77□□□□□ -0.84
SMARCA4-208ENST00000585799 ODF3BA8MYP8 253 aa9.77□□□□□ -0.85
SMARCA4-208ENST00000585799 GP9P14770 177 aa9.77□□□□□ -0.85
SMARCA4-208ENST00000585799 HIST1H1AQ02539 215 aaPredicted RBP9.77□□□□□ -0.85
SMARCA4-208ENST00000585799 Q86TA4 180 aa9.77□□□□□ -0.85
SMARCA4-208ENST00000585799 NPBQ8NG41 125 aa9.77□□□□□ -0.85
SMARCA4-208ENST00000585799 LY96Q9Y6Y9 160 aa9.77□□□□□ -0.85
SMARCA4-208ENST00000585799 RBPMS2Q6ZRY4 209 aaKnown RBP9.77□□□□□ -0.85
SMARCA4-208ENST00000585799 IGLV11-55A0A075B6I3 123 aa9.76□□□□□ -0.85
SMARCA4-208ENST00000585799 ZNF138P52744 262 aa9.76□□□□□ -0.85
SMARCA4-208ENST00000585799 FAM110DQ8TAY7 271 aaPredicted RBP9.76□□□□□ -0.85
SMARCA4-208ENST00000585799 C10orf105Q8TEF2 133 aa9.76□□□□□ -0.85
SMARCA4-208ENST00000585799 SRSF8Q9BRL6 282 aaKnown RBP9.76□□□□□ -0.85
SMARCA4-208ENST00000585799 FLNCQ14315 2725 aa9.76□□□□□ -0.85
SMARCA4-208ENST00000585799 HIVEP2P31629 2446 aa9.76□□□□□ -0.85
SMARCA4-208ENST00000585799 A0A1B0GUT8 65 aa9.76□□□□□ -0.85
SMARCA4-208ENST00000585799 HSBP1L1C9JCN9 74 aa9.76□□□□□ -0.85
SMARCA4-208ENST00000585799 INS-IGF2F8WCM5 200 aa9.76□□□□□ -0.85
SMARCA4-208ENST00000585799 H3BRN7 92 aa9.76□□□□□ -0.85
SMARCA4-208ENST00000585799 NUPR1O60356 82 aa9.76□□□□□ -0.85
SMARCA4-208ENST00000585799 YPEL4Q96NS1 127 aa9.76□□□□□ -0.85
SMARCA4-208ENST00000585799 NDUFA3O95167 84 aa9.76□□□□□ -0.85
SMARCA4-208ENST00000585799 DPF1Q92782 380 aa9.76□□□□□ -0.85
SMARCA4-208ENST00000585799 PYGO2Q9BRQ0 406 aa9.76□□□□□ -0.85
SMARCA4-208ENST00000585799 GNB1LQ9BYB4 327 aa9.76□□□□□ -0.85
SMARCA4-208ENST00000585799 TRBV9A0A0B4J1U6 114 aa9.75□□□□□ -0.85
SMARCA4-208ENST00000585799 YPEL3P61236 119 aaPredicted RBP9.75□□□□□ -0.85
SMARCA4-208ENST00000585799 OR4B1Q8NGF8 309 aa9.75□□□□□ -0.85
SMARCA4-208ENST00000585799 BEX4Q9NWD9 120 aaPredicted RBP9.75□□□□□ -0.85
SMARCA4-208ENST00000585799 IFITM10A6NMD0 228 aa9.75□□□□□ -0.85
SMARCA4-208ENST00000585799 CTSGP08311 255 aa9.75□□□□□ -0.85
SMARCA4-208ENST00000585799 PAFAH1B2P68402 229 aa9.75□□□□□ -0.85
SMARCA4-208ENST00000585799 TM4SF20Q53R12 229 aa9.75□□□□□ -0.85
SMARCA4-208ENST00000585799 IL17RELQ6ZVW7 336 aa9.75□□□□□ -0.85
SMARCA4-208ENST00000585799 TTC9CQ8N5M4 171 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms