RNA–Protein interactions for RNA: ENST00000585229.1

SMCHD1-212, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-212ENST00000585229 LINC00482Q8N8I6 264 aa7.47□□□□□ -1.21
SMCHD1-212ENST00000585229 OR4F17Q8NGA8 305 aa7.47□□□□□ -1.21
SMCHD1-212ENST00000585229 FAM210AQ96ND0 272 aa7.47□□□□□ -1.21
SMCHD1-212ENST00000585229 OR4F4Q96R69 305 aa7.47□□□□□ -1.21
SMCHD1-212ENST00000585229 ELOVL1Q9BW60 279 aa7.47□□□□□ -1.21
SMCHD1-212ENST00000585229 RHPN1-AS1Q9BWJ2 59 aa7.47□□□□□ -1.21
SMCHD1-212ENST00000585229 TMPRSS5Q9H3S3 457 aa7.47□□□□□ -1.21
SMCHD1-212ENST00000585229 TMEM231Q9H6L2 316 aa7.47□□□□□ -1.21
SMCHD1-212ENST00000585229 MANBALQ9NQG1 85 aa7.47□□□□□ -1.21
SMCHD1-212ENST00000585229 SMAD5-AS1Q9Y6J3 95 aa7.47□□□□□ -1.21
SMCHD1-212ENST00000585229 ANK2Q01484 3957 aa7.46□□□□□ -1.21
SMCHD1-212ENST00000585229 RAB19A4D1S5 217 aa7.46□□□□□ -1.22
SMCHD1-212ENST00000585229 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.46□□□□□ -1.22
SMCHD1-212ENST00000585229 OVOL1O14753 267 aa7.46□□□□□ -1.22
SMCHD1-212ENST00000585229 CBLN1P23435 193 aa7.46□□□□□ -1.22
SMCHD1-212ENST00000585229 TAGLN2P37802 199 aaKnown RBP7.46□□□□□ -1.22
SMCHD1-212ENST00000585229 GALR1P47211 349 aa7.46□□□□□ -1.22
SMCHD1-212ENST00000585229 MEOX2P50222 304 aa7.46□□□□□ -1.22
SMCHD1-212ENST00000585229 PDE6HQ13956 83 aa7.46□□□□□ -1.22
SMCHD1-212ENST00000585229 GUK1Q16774 197 aa7.46□□□□□ -1.22
SMCHD1-212ENST00000585229 FAM90A2PQ658T7 463 aa7.46□□□□□ -1.22
SMCHD1-212ENST00000585229 C12orf54Q6X4T0 127 aa7.46□□□□□ -1.22
SMCHD1-212ENST00000585229 OR8I2Q8N0Y5 310 aa7.46□□□□□ -1.22
SMCHD1-212ENST00000585229 EIF4E3Q8N5X7 224 aaKnown RBP7.46□□□□□ -1.22
SMCHD1-212ENST00000585229 GRAMD2BQ96HH9 432 aa7.46□□□□□ -1.22
SMCHD1-212ENST00000585229 KRTAP4-12Q9BQ66 201 aa7.46□□□□□ -1.22
SMCHD1-212ENST00000585229 WNK1Q9H4A3 2382 aa7.46□□□□□ -1.22
SMCHD1-212ENST00000585229 COL6A5A8TX70 2615 aa7.45□□□□□ -1.22
SMCHD1-212ENST00000585229 TRBV19A0A075B6N1 114 aa7.45□□□□□ -1.22
SMCHD1-212ENST00000585229 IGHV3-49A0A0A0MS15 119 aa7.45□□□□□ -1.22
SMCHD1-212ENST00000585229 LOC102723971A0A1B0GUV8 181 aa7.45□□□□□ -1.22
SMCHD1-212ENST00000585229 A0A1W2PRE2 83 aa7.45□□□□□ -1.22
SMCHD1-212ENST00000585229 H3BQ15 152 aa7.45□□□□□ -1.22
SMCHD1-212ENST00000585229 CD5P06127 495 aa7.45□□□□□ -1.22
SMCHD1-212ENST00000585229 OR10J4P0C629 311 aa7.45□□□□□ -1.22
SMCHD1-212ENST00000585229 NBEAP1P0C6P0 100 aa7.45□□□□□ -1.22
SMCHD1-212ENST00000585229 BCL2P10415 239 aa7.45□□□□□ -1.22
SMCHD1-212ENST00000585229 FOLR2P14207 255 aa7.45□□□□□ -1.22
SMCHD1-212ENST00000585229 NDUFA5Q16718 116 aa7.45□□□□□ -1.22
SMCHD1-212ENST00000585229 ZNF506Q5JVG8 444 aa7.45□□□□□ -1.22
SMCHD1-212ENST00000585229 SIGLEC15Q6ZMC9 328 aa7.45□□□□□ -1.22
SMCHD1-212ENST00000585229 KRTAP19-1Q8IUB9 90 aa7.45□□□□□ -1.22
SMCHD1-212ENST00000585229 LYPD1Q8N2G4 141 aa7.45□□□□□ -1.22
SMCHD1-212ENST00000585229 TXNDC17Q9BRA2 123 aa7.45□□□□□ -1.22
SMCHD1-212ENST00000585229 ZNF586Q9NXT0 402 aa7.45□□□□□ -1.22
SMCHD1-212ENST00000585229 MLXQ9UH92 298 aa7.45□□□□□ -1.22
SMCHD1-212ENST00000585229 STAB1Q9NY15 2570 aa7.45□□□□□ -1.22
SMCHD1-212ENST00000585229 VWFP04275 2813 aa7.44□□□□□ -1.22
SMCHD1-212ENST00000585229 IGHV3OR16-13A0A075B7E8 117 aa7.44□□□□□ -1.22
SMCHD1-212ENST00000585229 IGHV3-74A0A0B4J1X5 117 aa7.44□□□□□ -1.22
SMCHD1-212ENST00000585229 IGHV3-66A0A0C4DH42 116 aa7.44□□□□□ -1.22
SMCHD1-212ENST00000585229 A0A1B0GV50 99 aa7.44□□□□□ -1.22
SMCHD1-212ENST00000585229 HELTA6NFD8 242 aa7.44□□□□□ -1.22
SMCHD1-212ENST00000585229 RBFOX3A6NFN3 312 aa7.44□□□□□ -1.22
SMCHD1-212ENST00000585229 FAM74A7A6NL05 159 aa7.44□□□□□ -1.22
SMCHD1-212ENST00000585229 M0QZ24 198 aa7.44□□□□□ -1.22
SMCHD1-212ENST00000585229 SOCS3O14543 225 aa7.44□□□□□ -1.22
SMCHD1-212ENST00000585229 NDUFB4O95168 129 aa7.44□□□□□ -1.22
SMCHD1-212ENST00000585229 IFNA1P01562 189 aa7.44□□□□□ -1.22
SMCHD1-212ENST00000585229 ICAM4Q14773 271 aa7.44□□□□□ -1.22
SMCHD1-212ENST00000585229 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.44□□□□□ -1.22
SMCHD1-212ENST00000585229 NKX6-2Q9C056 277 aaPredicted RBP7.44□□□□□ -1.22
SMCHD1-212ENST00000585229 SMDT1Q9H4I9 107 aa7.44□□□□□ -1.22
SMCHD1-212ENST00000585229 GNG13Q9P2W3 67 aa7.44□□□□□ -1.22
SMCHD1-212ENST00000585229 TRAV2A0A0B4J234 112 aa7.43□□□□□ -1.22
SMCHD1-212ENST00000585229 KRTAP9-6A0A140TA67 174 aa7.43□□□□□ -1.22
SMCHD1-212ENST00000585229 SLC17A3O00476 420 aa7.43□□□□□ -1.22
SMCHD1-212ENST00000585229 PAGE4O60829 102 aa7.43□□□□□ -1.22
SMCHD1-212ENST00000585229 RIPPLY3P57055 190 aa7.43□□□□□ -1.22
SMCHD1-212ENST00000585229 MEF2BQ02080 365 aaPredicted RBP7.43□□□□□ -1.22
SMCHD1-212ENST00000585229 TOR2AQ5JU69 321 aa7.43□□□□□ -1.22
SMCHD1-212ENST00000585229 UQCC3Q6UW78 93 aa7.43□□□□□ -1.22
SMCHD1-212ENST00000585229 TCF24Q7RTU0 167 aa7.43□□□□□ -1.22
SMCHD1-212ENST00000585229 COMMD7Q86VX2 200 aa7.43□□□□□ -1.22
SMCHD1-212ENST00000585229 CCDC28AQ8IWP9 274 aa7.43□□□□□ -1.22
SMCHD1-212ENST00000585229 ARL6IP6Q8N6S5 226 aa7.43□□□□□ -1.22
SMCHD1-212ENST00000585229 C3orf56Q8N813 242 aa7.43□□□□□ -1.22
SMCHD1-212ENST00000585229 OR2K2Q8NGT1 345 aa7.43□□□□□ -1.22
SMCHD1-212ENST00000585229 TCEAL7Q9BRU2 100 aa7.43□□□□□ -1.22
SMCHD1-212ENST00000585229 SLC50A1Q9BRV3 221 aa7.43□□□□□ -1.22
SMCHD1-212ENST00000585229 NRN1Q9NPD7 142 aa7.43□□□□□ -1.22
SMCHD1-212ENST00000585229 ZNF331Q9NQX6 463 aaPredicted RBP7.43□□□□□ -1.22
SMCHD1-212ENST00000585229 VAX2Q9UIW0 290 aa7.43□□□□□ -1.22
SMCHD1-212ENST00000585229 YTHDF2Q9Y5A9 579 aaKnown RBP7.43□□□□□ -1.22
SMCHD1-212ENST00000585229 TRAV25A0A0B4J276 109 aa7.42□□□□□ -1.22
SMCHD1-212ENST00000585229 GGTLC3B5MD39 225 aa7.42□□□□□ -1.22
SMCHD1-212ENST00000585229 TSPAN4O14817 238 aa7.42□□□□□ -1.22
SMCHD1-212ENST00000585229 CD81P60033 236 aa7.42□□□□□ -1.22
SMCHD1-212ENST00000585229 HAGHQ16775 308 aa7.42□□□□□ -1.22
SMCHD1-212ENST00000585229 DEFB114Q30KQ6 69 aa7.42□□□□□ -1.22
SMCHD1-212ENST00000585229 SAMD13Q5VXD3 122 aa7.42□□□□□ -1.22
SMCHD1-212ENST00000585229 IQCF2Q8IXL9 164 aa7.42□□□□□ -1.22
SMCHD1-212ENST00000585229 WFDC9Q8NEX5 89 aa7.42□□□□□ -1.22
SMCHD1-212ENST00000585229 C11orf52Q96A22 123 aa7.42□□□□□ -1.22
SMCHD1-212ENST00000585229 RARRES2Q99969 163 aa7.42□□□□□ -1.22
SMCHD1-212ENST00000585229 OTORQ9NRC9 128 aa7.42□□□□□ -1.22
SMCHD1-212ENST00000585229 CLEC5AQ9NY25 188 aa7.42□□□□□ -1.22
SMCHD1-212ENST00000585229 TRAV8-2A0A0B4J237 113 aa7.41□□□□□ -1.22
SMCHD1-212ENST00000585229 ZNF785A8K8V0 405 aa7.41□□□□□ -1.22
SMCHD1-212ENST00000585229 C11orf94C9JXX5 98 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms