RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 PKHD1P08F94 4074 aa10.61□□□□□ -0.71
VAPA-209ENST00000585042 IGLV2-18A0A075B6J9 118 aa10.61□□□□□ -0.71
VAPA-209ENST00000585042 SMCO3A2RU48 225 aa10.61□□□□□ -0.71
VAPA-209ENST00000585042 HTN3P15516 51 aa10.61□□□□□ -0.71
VAPA-209ENST00000585042 ORM2P19652 201 aa10.61□□□□□ -0.71
VAPA-209ENST00000585042 BCAP31P51572 246 aa10.61□□□□□ -0.71
VAPA-209ENST00000585042 CYCSP99999 105 aaKnown RBP10.61□□□□□ -0.71
VAPA-209ENST00000585042 TMEM88Q6PEY1 159 aa10.61□□□□□ -0.71
VAPA-209ENST00000585042 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.61□□□□□ -0.71
VAPA-209ENST00000585042 ACOT7LQ6ZUV0 252 aa10.61□□□□□ -0.71
VAPA-209ENST00000585042 TMEM144Q7Z5S9 345 aa10.61□□□□□ -0.71
VAPA-209ENST00000585042 S100A7AQ86SG5 101 aa10.61□□□□□ -0.71
VAPA-209ENST00000585042 SLC25A22Q9H936 323 aa10.61□□□□□ -0.71
VAPA-209ENST00000585042 RCL1Q9Y2P8 373 aaKnown RBP10.61□□□□□ -0.71
VAPA-209ENST00000585042 DNAH17Q9UFH2 4485 aa10.6□□□□□ -0.71
VAPA-209ENST00000585042 C7orf66A4D0T2 115 aa10.6□□□□□ -0.71
VAPA-209ENST00000585042 FNDC10F2Z333 226 aa10.6□□□□□ -0.71
VAPA-209ENST00000585042 K7EPK0 472 aa10.6□□□□□ -0.71
VAPA-209ENST00000585042 SSNA1O43805 119 aa10.6□□□□□ -0.71
VAPA-209ENST00000585042 RLN2P04090 185 aa10.6□□□□□ -0.71
VAPA-209ENST00000585042 METTL15P1P0C7V9 234 aa10.6□□□□□ -0.71
VAPA-209ENST00000585042 CNN1P51911 297 aaKnown RBP10.6□□□□□ -0.71
VAPA-209ENST00000585042 S100A10P60903 97 aa10.6□□□□□ -0.71
VAPA-209ENST00000585042 DLK1P80370 383 aa10.6□□□□□ -0.71
VAPA-209ENST00000585042 TMEM14EPQ6UXP3 125 aa10.6□□□□□ -0.71
VAPA-209ENST00000585042 OR11H7Q8NGC8 314 aa10.6□□□□□ -0.71
VAPA-209ENST00000585042 GGACTQ9BVM4 153 aa10.6□□□□□ -0.71
VAPA-209ENST00000585042 RNF24Q9Y225 148 aa10.6□□□□□ -0.71
VAPA-209ENST00000585042 MUC4Q99102 2169 aa10.6□□□□□ -0.71
VAPA-209ENST00000585042 DNAH2Q9P225 4427 aa10.6□□□□□ -0.71
VAPA-209ENST00000585042 A6NJY4 79 aa10.59□□□□□ -0.71
VAPA-209ENST00000585042 GOSR2O14653 212 aa10.59□□□□□ -0.71
VAPA-209ENST00000585042 CRXO43186 299 aaPredicted RBP10.59□□□□□ -0.71
VAPA-209ENST00000585042 PTTG1O95997 202 aa10.59□□□□□ -0.71
VAPA-209ENST00000585042 INSP01308 110 aa10.59□□□□□ -0.71
VAPA-209ENST00000585042 RPL7P18124 248 aaKnown RBP10.59□□□□□ -0.71
VAPA-209ENST00000585042 SMCPP49901 116 aaPredicted RBP10.59□□□□□ -0.71
VAPA-209ENST00000585042 CAV2P51636 162 aa10.59□□□□□ -0.71
VAPA-209ENST00000585042 PLP1P60201 277 aa10.59□□□□□ -0.71
VAPA-209ENST00000585042 SELENOTP62341 195 aa10.59□□□□□ -0.71
VAPA-209ENST00000585042 TMEM256Q8N2U0 113 aa10.59□□□□□ -0.71
VAPA-209ENST00000585042 NPVFQ9HCQ7 196 aa10.59□□□□□ -0.71
VAPA-209ENST00000585042 RAP2BP61225 183 aa10.58□□□□□ -0.72
VAPA-209ENST00000585042 TMEM182Q6ZP80 229 aaPredicted RBP10.58□□□□□ -0.72
VAPA-209ENST00000585042 ATG101Q9BSB4 218 aa10.58□□□□□ -0.72
VAPA-209ENST00000585042 SHANK2-AS3Q9BTD1 123 aa10.58□□□□□ -0.72
VAPA-209ENST00000585042 SLC25A39Q9BZJ4 359 aaPredicted RBP10.58□□□□□ -0.72
VAPA-209ENST00000585042 NMES1Q9C002 83 aa10.58□□□□□ -0.72
VAPA-209ENST00000585042 NACAE9PAV3 2078 aa10.57□□□□□ -0.72
VAPA-209ENST00000585042 TRAV8-2A0A0B4J237 113 aa10.57□□□□□ -0.72
VAPA-209ENST00000585042 CBY3A6NI87 242 aa10.57□□□□□ -0.72
VAPA-209ENST00000585042 ZNF705GA8MUZ8 300 aaPredicted RBP10.57□□□□□ -0.72
VAPA-209ENST00000585042 H3BRN7 92 aa10.57□□□□□ -0.72
VAPA-209ENST00000585042 HYPMO75409 117 aa10.57□□□□□ -0.72
VAPA-209ENST00000585042 GATA2P23769 480 aaPredicted RBP10.57□□□□□ -0.72
VAPA-209ENST00000585042 RRAS2P62070 204 aaPredicted RBP10.57□□□□□ -0.72
VAPA-209ENST00000585042 RAB32Q13637 225 aa10.57□□□□□ -0.72
VAPA-209ENST00000585042 SPINK13Q1W4C9 94 aa10.57□□□□□ -0.72
VAPA-209ENST00000585042 CYP2G1PQ6ZSU1 146 aa10.57□□□□□ -0.72
VAPA-209ENST00000585042 STX12Q86Y82 276 aa10.57□□□□□ -0.72
VAPA-209ENST00000585042 HIGD1AQ9Y241 93 aa10.57□□□□□ -0.72
VAPA-209ENST00000585042 PKD1P98161 4303 aa10.57□□□□□ -0.72
VAPA-209ENST00000585042 A0A087X0K7 114 aa10.56□□□□□ -0.72
VAPA-209ENST00000585042 PMS2P5A8MQ11 134 aa10.56□□□□□ -0.72
VAPA-209ENST00000585042 M0R2Z0 102 aa10.56□□□□□ -0.72
VAPA-209ENST00000585042 HBG1P69891 147 aa10.56□□□□□ -0.72
VAPA-209ENST00000585042 HBG2P69892 147 aa10.56□□□□□ -0.72
VAPA-209ENST00000585042 IL15RAQ13261 267 aa10.56□□□□□ -0.72
VAPA-209ENST00000585042 RAB31Q13636 194 aa10.56□□□□□ -0.72
VAPA-209ENST00000585042 TEPPQ6URK8 271 aa10.56□□□□□ -0.72
VAPA-209ENST00000585042 LYRM2Q9NU23 88 aaPredicted RBP10.56□□□□□ -0.72
VAPA-209ENST00000585042 BOLA2-SMG1P6H3BVE0 249 aa10.55□□□□□ -0.72
VAPA-209ENST00000585042 SIX6O95475 246 aa10.55□□□□□ -0.72
VAPA-209ENST00000585042 ATP5G1P05496 136 aa10.55□□□□□ -0.72
VAPA-209ENST00000585042 PET100P0DJ07 73 aa10.55□□□□□ -0.72
VAPA-209ENST00000585042 S100A11P31949 105 aa10.55□□□□□ -0.72
VAPA-209ENST00000585042 ATP5G3P48201 142 aa10.55□□□□□ -0.72
VAPA-209ENST00000585042 SULT1A1P50225 295 aa10.55□□□□□ -0.72
VAPA-209ENST00000585042 TAS2R60P59551 318 aa10.55□□□□□ -0.72
VAPA-209ENST00000585042 FGL1Q08830 312 aa10.55□□□□□ -0.72
VAPA-209ENST00000585042 SLC38A11Q08AI6 406 aa10.55□□□□□ -0.72
VAPA-209ENST00000585042 PSG3Q16557 428 aa10.55□□□□□ -0.72
VAPA-209ENST00000585042 PXDC1Q5TGL8 231 aa10.55□□□□□ -0.72
VAPA-209ENST00000585042 ZNF493Q6ZR52 646 aa10.55□□□□□ -0.72
VAPA-209ENST00000585042 RNF182Q8N6D2 247 aa10.55□□□□□ -0.72
VAPA-209ENST00000585042 ZNF738Q8NE65 137 aa10.55□□□□□ -0.72
VAPA-209ENST00000585042 OR8A1Q8NGG7 326 aa10.55□□□□□ -0.72
VAPA-209ENST00000585042 SLC25A31Q9H0C2 315 aa10.55□□□□□ -0.72
VAPA-209ENST00000585042 PLAC8L1A1L4L8 177 aa10.54□□□□□ -0.72
VAPA-209ENST00000585042 FAM24AA6NFZ4 105 aa10.54□□□□□ -0.72
VAPA-209ENST00000585042 E5RGE8 158 aa10.54□□□□□ -0.72
VAPA-209ENST00000585042 CCNKO75909 580 aa10.54□□□□□ -0.72
VAPA-209ENST00000585042 CST7O76096 145 aa10.54□□□□□ -0.72
VAPA-209ENST00000585042 DEFB130BP0DP73 79 aa10.54□□□□□ -0.72
VAPA-209ENST00000585042 DEFB130AP0DP74 79 aa10.54□□□□□ -0.72
VAPA-209ENST00000585042 CXCL3P19876 107 aa10.54□□□□□ -0.72
VAPA-209ENST00000585042 CCL18P55774 89 aa10.54□□□□□ -0.72
VAPA-209ENST00000585042 ATP6V1FQ16864 119 aa10.54□□□□□ -0.72
VAPA-209ENST00000585042 IGFL4Q6B9Z1 124 aa10.54□□□□□ -0.72
VAPA-209ENST00000585042 ZNF546Q86UE3 836 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms