RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 MRPS12O15235 138 aaKnown RBP8.77□□□□□ -1.01
CDRT1-207ENST00000583965 OR7C2O60412 319 aa8.77□□□□□ -1.01
CDRT1-207ENST00000583965 STAG3L2P0CL84 134 aa8.77□□□□□ -1.01
CDRT1-207ENST00000583965 STAG3L3P0CL85 134 aa8.77□□□□□ -1.01
CDRT1-207ENST00000583965 GP9P14770 177 aa8.77□□□□□ -1.01
CDRT1-207ENST00000583965 PPT1P50897 306 aa8.77□□□□□ -1.01
CDRT1-207ENST00000583965 CCL20P78556 96 aa8.77□□□□□ -1.01
CDRT1-207ENST00000583965 PEA15Q15121 130 aa8.77□□□□□ -1.01
CDRT1-207ENST00000583965 TOR2AQ5JU69 321 aa8.77□□□□□ -1.01
CDRT1-207ENST00000583965 ZNF506Q5JVG8 444 aa8.77□□□□□ -1.01
CDRT1-207ENST00000583965 LCN15Q6UWW0 184 aa8.77□□□□□ -1.01
CDRT1-207ENST00000583965 PAXXQ9BUH6 204 aa8.77□□□□□ -1.01
CDRT1-207ENST00000583965 OR51M1Q9H341 326 aa8.77□□□□□ -1.01
CDRT1-207ENST00000583965 NRN1Q9NPD7 142 aa8.77□□□□□ -1.01
CDRT1-207ENST00000583965 TMEM218A2RU14 115 aa8.76□□□□□ -1.01
CDRT1-207ENST00000583965 DNASE2O00115 360 aaPredicted RBP8.76□□□□□ -1.01
CDRT1-207ENST00000583965 CXorf1O96002 111 aa8.76□□□□□ -1.01
CDRT1-207ENST00000583965 IGLC2P0DOY2 106 aa8.76□□□□□ -1.01
CDRT1-207ENST00000583965 HIST1H1EP10412 219 aaKnown RBP8.76□□□□□ -1.01
CDRT1-207ENST00000583965 PSMB3P49720 205 aa8.76□□□□□ -1.01
CDRT1-207ENST00000583965 EGFEM1PQ0D2K5 195 aa8.76□□□□□ -1.01
CDRT1-207ENST00000583965 OXLD1Q5BKU9 147 aa8.76□□□□□ -1.01
CDRT1-207ENST00000583965 SAMD5Q5TGI4 173 aa8.76□□□□□ -1.01
CDRT1-207ENST00000583965 MS4A6AQ9H2W1 248 aa8.76□□□□□ -1.01
CDRT1-207ENST00000583965 MANBALQ9NQG1 85 aa8.76□□□□□ -1.01
CDRT1-207ENST00000583965 SMAD5-AS1Q9Y6J3 95 aa8.76□□□□□ -1.01
CDRT1-207ENST00000583965 NOTCH1P46531 2555 aa8.76□□□□□ -1.01
CDRT1-207ENST00000583965 LOC102723971A0A1B0GUV8 181 aa8.75□□□□□ -1.01
CDRT1-207ENST00000583965 IZUMO1RA6ND01 250 aa8.75□□□□□ -1.01
CDRT1-207ENST00000583965 RBFOX3A6NFN3 312 aa8.75□□□□□ -1.01
CDRT1-207ENST00000583965 OR4C46A6NHA9 309 aa8.75□□□□□ -1.01
CDRT1-207ENST00000583965 ZNF253O75346 499 aa8.75□□□□□ -1.01
CDRT1-207ENST00000583965 IFNA1P01562 189 aa8.75□□□□□ -1.01
CDRT1-207ENST00000583965 ARL14EPLP0DKL9 152 aa8.75□□□□□ -1.01
CDRT1-207ENST00000583965 PYYP10082 97 aa8.75□□□□□ -1.01
CDRT1-207ENST00000583965 BCL2P10415 239 aa8.75□□□□□ -1.01
CDRT1-207ENST00000583965 SRSF3P84103 164 aaKnown RBP8.75□□□□□ -1.01
CDRT1-207ENST00000583965 PDE6HQ13956 83 aa8.75□□□□□ -1.01
CDRT1-207ENST00000583965 C10orf91Q5T1B1 145 aa8.75□□□□□ -1.01
CDRT1-207ENST00000583965 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.75□□□□□ -1.01
CDRT1-207ENST00000583965 DCANP1Q8TF63 244 aa8.75□□□□□ -1.01
CDRT1-207ENST00000583965 ZNF503Q96F45 646 aa8.75□□□□□ -1.01
CDRT1-207ENST00000583965 SELENOKQ9Y6D0 94 aa8.75□□□□□ -1.01
CDRT1-207ENST00000583965 ARL2-SNX15V9GYD0 113 aa8.75□□□□□ -1.01
CDRT1-207ENST00000583965 DNHD1Q96M86 4753 aa8.74□□□□□ -1.01
CDRT1-207ENST00000583965 IGKV3-7A0A075B6H7 116 aa8.74□□□□□ -1.01
CDRT1-207ENST00000583965 K7EQG2 157 aa8.74□□□□□ -1.01
CDRT1-207ENST00000583965 ISLRO14498 428 aa8.74□□□□□ -1.01
CDRT1-207ENST00000583965 HMGB3O15347 200 aaKnown RBP8.74□□□□□ -1.01
CDRT1-207ENST00000583965 NBEAP1P0C6P0 100 aa8.74□□□□□ -1.01
CDRT1-207ENST00000583965 GCHFRP30047 84 aa8.74□□□□□ -1.01
CDRT1-207ENST00000583965 FGF8P55075 233 aaPredicted RBP8.74□□□□□ -1.01
CDRT1-207ENST00000583965 CMC4P56277 68 aaPredicted RBP8.74□□□□□ -1.01
CDRT1-207ENST00000583965 UBE2L3P68036 154 aaKnown RBP8.74□□□□□ -1.01
CDRT1-207ENST00000583965 ICAM4Q14773 271 aa8.74□□□□□ -1.01
CDRT1-207ENST00000583965 GUCA2BQ16661 112 aa8.74□□□□□ -1.01
CDRT1-207ENST00000583965 BEAN1Q3B7T3 259 aa8.74□□□□□ -1.01
CDRT1-207ENST00000583965 GBGT1Q8N5D6 347 aa8.74□□□□□ -1.01
CDRT1-207ENST00000583965 SUN5Q8TC36 379 aa8.74□□□□□ -1.01
CDRT1-207ENST00000583965 FXYD5Q96DB9 178 aa8.74□□□□□ -1.01
CDRT1-207ENST00000583965 LINC00052Q96N35 136 aa8.74□□□□□ -1.01
CDRT1-207ENST00000583965 SLC50A1Q9BRV3 221 aa8.74□□□□□ -1.01
CDRT1-207ENST00000583965 SEC11CQ9BY50 192 aa8.74□□□□□ -1.01
CDRT1-207ENST00000583965 TREM1Q9NP99 234 aa8.74□□□□□ -1.01
CDRT1-207ENST00000583965 TMEM167BQ9NRX6 74 aa8.74□□□□□ -1.01
CDRT1-207ENST00000583965 ZNF586Q9NXT0 402 aa8.74□□□□□ -1.01
CDRT1-207ENST00000583965 CLEC5AQ9NY25 188 aa8.74□□□□□ -1.01
CDRT1-207ENST00000583965 ZNF256Q9Y2P7 627 aaPredicted RBP8.74□□□□□ -1.01
CDRT1-207ENST00000583965 AGRNO00468 2067 aa8.73□□□□□ -1.01
CDRT1-207ENST00000583965 TRBV19A0A075B6N1 114 aa8.73□□□□□ -1.01
CDRT1-207ENST00000583965 A0A1B0GV50 99 aa8.73□□□□□ -1.01
CDRT1-207ENST00000583965 G3V4G9 280 aa8.73□□□□□ -1.01
CDRT1-207ENST00000583965 H3BQ15 152 aa8.73□□□□□ -1.01
CDRT1-207ENST00000583965 SOCS3O14543 225 aa8.73□□□□□ -1.01
CDRT1-207ENST00000583965 OR10J4P0C629 311 aa8.73□□□□□ -1.01
CDRT1-207ENST00000583965 ID1P41134 155 aa8.73□□□□□ -1.01
CDRT1-207ENST00000583965 SNRPD3P62318 126 aaKnown RBP8.73□□□□□ -1.01
CDRT1-207ENST00000583965 C16orf92Q96LL3 132 aa8.73□□□□□ -1.01
CDRT1-207ENST00000583965 C17orf77Q96MU5 243 aa8.73□□□□□ -1.01
CDRT1-207ENST00000583965 FAM110AQ9BQ89 295 aa8.73□□□□□ -1.01
CDRT1-207ENST00000583965 TXNDC17Q9BRA2 123 aa8.73□□□□□ -1.01
CDRT1-207ENST00000583965 EIF5A2Q9GZV4 153 aaKnown RBP8.73□□□□□ -1.01
CDRT1-207ENST00000583965 GNG13Q9P2W3 67 aa8.73□□□□□ -1.01
CDRT1-207ENST00000583965 VAX2Q9UIW0 290 aa8.73□□□□□ -1.01
CDRT1-207ENST00000583965 CARHSP1Q9Y2V2 147 aaKnown RBP8.73□□□□□ -1.01
CDRT1-207ENST00000583965 C9JQL5 133 aa8.72□□□□□ -1.01
CDRT1-207ENST00000583965 EIF3GO75821 320 aaKnown RBP eCLIP8.72□□□□□ -1.01
CDRT1-207ENST00000583965 TFPI2P48307 235 aa8.72□□□□□ -1.01
CDRT1-207ENST00000583965 PSG9Q00887 426 aa8.72□□□□□ -1.01
CDRT1-207ENST00000583965 HAGHQ16775 308 aa8.72□□□□□ -1.01
CDRT1-207ENST00000583965 KPRPQ5T749 579 aaPredicted RBP8.72□□□□□ -1.01
CDRT1-207ENST00000583965 GTSCR1Q86UQ5 136 aa8.72□□□□□ -1.01
CDRT1-207ENST00000583965 WFDC3Q8IUB2 231 aa8.72□□□□□ -1.01
CDRT1-207ENST00000583965 LYPD1Q8N2G4 141 aa8.72□□□□□ -1.01
CDRT1-207ENST00000583965 BLNKQ8WV28 456 aa8.72□□□□□ -1.01
CDRT1-207ENST00000583965 RARRES2Q99969 163 aa8.72□□□□□ -1.01
CDRT1-207ENST00000583965 SLC35B3Q9H1N7 401 aa8.72□□□□□ -1.01
CDRT1-207ENST00000583965 ZNF331Q9NQX6 463 aaPredicted RBP8.72□□□□□ -1.01
CDRT1-207ENST00000583965 SRP19P09132 144 aaKnown RBP8.71□□□□□ -1.02
CDRT1-207ENST00000583965 SFTA3P0C7M3 94 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms