RNA–Protein interactions for RNA: ENST00000583821.1

MSI2-218, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-218	ENST00000583821	DTD1	Q8TEA8	209 aa		5.78	□□□□□ -1.48
MSI2-218	ENST00000583821	PBDC1	Q9BVG4	233 aa		5.78	□□□□□ -1.48
MSI2-218	ENST00000583821	RBKS	Q9H477	322 aa		5.78	□□□□□ -1.48
MSI2-218	ENST00000583821	HLA-DRB4	X5D2U9	266 aa		5.78	□□□□□ -1.48
MSI2-218	ENST00000583821	IGKV1D-37	A0A075B6S9	117 aa		5.77	□□□□□ -1.49
MSI2-218	ENST00000583821		A0A1B0GV90	55 aa		5.77	□□□□□ -1.49
MSI2-218	ENST00000583821	TMEM218	A2RU14	115 aa		5.77	□□□□□ -1.49
MSI2-218	ENST00000583821	FABP12	A6NFH5	140 aa		5.77	□□□□□ -1.49
MSI2-218	ENST00000583821	DISC1	C4P0D8	188 aa		5.77	□□□□□ -1.49
MSI2-218	ENST00000583821		F6UB75	175 aa		5.77	□□□□□ -1.49
MSI2-218	ENST00000583821	PRAF2	O60831	178 aa		5.77	□□□□□ -1.49
MSI2-218	ENST00000583821	RD3L	P0DJH9	198 aa		5.77	□□□□□ -1.49
MSI2-218	ENST00000583821	SULT1A3	P0DMM9	295 aa		5.77	□□□□□ -1.49
MSI2-218	ENST00000583821	SULT1A4	P0DMN0	295 aa		5.77	□□□□□ -1.49
MSI2-218	ENST00000583821	ANXA7	P20073	488 aa	Known RBP	5.77	□□□□□ -1.49
MSI2-218	ENST00000583821	S100A2	P29034	98 aa		5.77	□□□□□ -1.49
MSI2-218	ENST00000583821	SNRPD3	P62318	126 aa	Known RBP	5.77	□□□□□ -1.49
MSI2-218	ENST00000583821	RPP30	P78346	268 aa	Known RBP	5.77	□□□□□ -1.49
MSI2-218	ENST00000583821	ZNF90	Q03938	601 aa		5.77	□□□□□ -1.49
MSI2-218	ENST00000583821	PYDC2	Q56P42	97 aa		5.77	□□□□□ -1.49
MSI2-218	ENST00000583821	POM121L12	Q8N7R1	296 aa		5.77	□□□□□ -1.49
MSI2-218	ENST00000583821	OR51S1	Q8NGJ8	323 aa		5.77	□□□□□ -1.49
MSI2-218	ENST00000583821	SMIM4	Q8WVI0	70 aa		5.77	□□□□□ -1.49
MSI2-218	ENST00000583821	RNF125	Q96EQ8	232 aa		5.77	□□□□□ -1.49
MSI2-218	ENST00000583821	CLUHP3	Q96NS8	147 aa		5.77	□□□□□ -1.49
MSI2-218	ENST00000583821	C7orf50	Q9BRJ6	194 aa	Known RBP	5.77	□□□□□ -1.49
MSI2-218	ENST00000583821	GPR132	Q9UNW8	380 aa		5.77	□□□□□ -1.49
MSI2-218	ENST00000583821	APOB	P04114	4563 aa	Known RBP	5.77	□□□□□ -1.49
MSI2-218	ENST00000583821	LRP1B	Q9NZR2	4599 aa		5.77	□□□□□ -1.49
MSI2-218	ENST00000583821	IGLV2-18	A0A075B6J9	118 aa		5.76	□□□□□ -1.49
MSI2-218	ENST00000583821	C7orf66	A4D0T2	115 aa		5.76	□□□□□ -1.49
MSI2-218	ENST00000583821	C5orf52	A6NGY3	159 aa		5.76	□□□□□ -1.49
MSI2-218	ENST00000583821	PRSS29P	A6NIE9	313 aa		5.76	□□□□□ -1.49
MSI2-218	ENST00000583821	ZNF705F	A8MVS1	300 aa	Predicted RBP	5.76	□□□□□ -1.49
MSI2-218	ENST00000583821	SOCS3	O14543	225 aa		5.76	□□□□□ -1.49
MSI2-218	ENST00000583821	LYRM1	O43325	122 aa		5.76	□□□□□ -1.49
MSI2-218	ENST00000583821	ZNF705D	P0CH99	300 aa	Predicted RBP	5.76	□□□□□ -1.49
MSI2-218	ENST00000583821	ZNF705B	P0CI00	300 aa	Predicted RBP	5.76	□□□□□ -1.49
MSI2-218	ENST00000583821	AKAIN1	P0CW23	69 aa		5.76	□□□□□ -1.49
MSI2-218	ENST00000583821	CEBPG	P53567	150 aa		5.76	□□□□□ -1.49
MSI2-218	ENST00000583821	LYZ	P61626	148 aa		5.76	□□□□□ -1.49
MSI2-218	ENST00000583821	SUPT4H1	P63272	117 aa	Known RBP	5.76	□□□□□ -1.49
MSI2-218	ENST00000583821	OR2F1	Q13607	317 aa		5.76	□□□□□ -1.49
MSI2-218	ENST00000583821	IL18	Q14116	193 aa		5.76	□□□□□ -1.49
MSI2-218	ENST00000583821	OPCML	Q14982	345 aa		5.76	□□□□□ -1.49
MSI2-218	ENST00000583821	ZNF705A	Q6ZN79	300 aa	Predicted RBP	5.76	□□□□□ -1.49
MSI2-218	ENST00000583821	LYZL2	Q7Z4W2	148 aa		5.76	□□□□□ -1.49
MSI2-218	ENST00000583821	LGI3	Q8N145	548 aa		5.76	□□□□□ -1.49
MSI2-218	ENST00000583821	C15orf54	Q8N8G6	183 aa		5.76	□□□□□ -1.49
MSI2-218	ENST00000583821	ZNF709	Q8N972	641 aa		5.76	□□□□□ -1.49
MSI2-218	ENST00000583821	SDHC	Q99643	169 aa	Predicted RBP	5.76	□□□□□ -1.49
MSI2-218	ENST00000583821	NDUFAF3	Q9BU61	184 aa		5.76	□□□□□ -1.49
MSI2-218	ENST00000583821	C1QTNF4	Q9BXJ3	329 aa		5.76	□□□□□ -1.49
MSI2-218	ENST00000583821	SLC35B3	Q9H1N7	401 aa		5.76	□□□□□ -1.49
MSI2-218	ENST00000583821	HSPB7	Q9UBY9	170 aa		5.76	□□□□□ -1.49
MSI2-218	ENST00000583821	TMEM56-RWDD3	S4R434	201 aa		5.76	□□□□□ -1.49
MSI2-218	ENST00000583821		A0A1W2PPQ1	181 aa		5.75	□□□□□ -1.49
MSI2-218	ENST00000583821	ZFP92	A6NM28	416 aa		5.75	□□□□□ -1.49
MSI2-218	ENST00000583821	GSTZ1	O43708	216 aa	Predicted RBP	5.75	□□□□□ -1.49
MSI2-218	ENST00000583821		P0DMU3	169 aa		5.75	□□□□□ -1.49
MSI2-218	ENST00000583821	FAM231A	P0DMU4	169 aa		5.75	□□□□□ -1.49
MSI2-218	ENST00000583821	FAM231C	P0DMU5	169 aa		5.75	□□□□□ -1.49
MSI2-218	ENST00000583821	IAPP	P10997	89 aa		5.75	□□□□□ -1.49
MSI2-218	ENST00000583821	HTN3	P15516	51 aa		5.75	□□□□□ -1.49
MSI2-218	ENST00000583821	AKR1C4	P17516	323 aa		5.75	□□□□□ -1.49
MSI2-218	ENST00000583821	NKX2-1	P43699	371 aa	Predicted RBP	5.75	□□□□□ -1.49
MSI2-218	ENST00000583821	NUTF2	P61970	127 aa	Known RBP	5.75	□□□□□ -1.49
MSI2-218	ENST00000583821	SSBP1	Q04837	148 aa	Known RBP	5.75	□□□□□ -1.49
MSI2-218	ENST00000583821	GAMT	Q14353	236 aa		5.75	□□□□□ -1.49
MSI2-218	ENST00000583821	SURF2	Q15527	256 aa	Predicted RBP	5.75	□□□□□ -1.49
MSI2-218	ENST00000583821	MAJIN	Q3KP22	176 aa		5.75	□□□□□ -1.49
MSI2-218	ENST00000583821	FAM222A	Q5U5X8	452 aa		5.75	□□□□□ -1.49
MSI2-218	ENST00000583821	ETFRF1	Q6IPR1	90 aa		5.75	□□□□□ -1.49
MSI2-218	ENST00000583821	LINC00336	Q6ZUF6	198 aa		5.75	□□□□□ -1.49
MSI2-218	ENST00000583821	OR4B1	Q8NGF8	309 aa		5.75	□□□□□ -1.49
MSI2-218	ENST00000583821	THAP6	Q8TBB0	222 aa		5.75	□□□□□ -1.49
MSI2-218	ENST00000583821	SMCO4	Q9NRQ5	59 aa		5.75	□□□□□ -1.49
MSI2-218	ENST00000583821	RFNG	Q9Y644	331 aa		5.75	□□□□□ -1.49
MSI2-218	ENST00000583821		V9GYH0	126 aa		5.75	□□□□□ -1.49
MSI2-218	ENST00000583821	IGKV1OR2-108	A0A075B7D4	117 aa		5.74	□□□□□ -1.49
MSI2-218	ENST00000583821	ANKRD20A5P	A0PJZ0	165 aa		5.74	□□□□□ -1.49
MSI2-218	ENST00000583821	PRM2	P04554	102 aa		5.74	□□□□□ -1.49
MSI2-218	ENST00000583821	NMB	P08949	121 aa		5.74	□□□□□ -1.49
MSI2-218	ENST00000583821	METTL15P1	P0C7V9	234 aa		5.74	□□□□□ -1.49
MSI2-218	ENST00000583821	DDT	P30046	118 aa		5.74	□□□□□ -1.49
MSI2-218	ENST00000583821	PSMB3	P49720	205 aa		5.74	□□□□□ -1.49
MSI2-218	ENST00000583821	CCR6	P51684	374 aa		5.74	□□□□□ -1.49
MSI2-218	ENST00000583821	RAP2B	P61225	183 aa		5.74	□□□□□ -1.49
MSI2-218	ENST00000583821	MRPS10	P82664	201 aa	Known RBP	5.74	□□□□□ -1.49
MSI2-218	ENST00000583821	KLF9	Q13886	244 aa	Predicted RBP	5.74	□□□□□ -1.49
MSI2-218	ENST00000583821	PEA15	Q15121	130 aa		5.74	□□□□□ -1.49
MSI2-218	ENST00000583821	ZNF79	Q15937	498 aa		5.74	□□□□□ -1.49
MSI2-218	ENST00000583821	LCE1D	Q5T752	114 aa		5.74	□□□□□ -1.49
MSI2-218	ENST00000583821	FAM78B	Q5VT40	261 aa		5.74	□□□□□ -1.49
MSI2-218	ENST00000583821	OR8G2P	Q6IF36	304 aa		5.74	□□□□□ -1.49
MSI2-218	ENST00000583821	EIF5AL1	Q6IS14	154 aa	Known RBP	5.74	□□□□□ -1.49
MSI2-218	ENST00000583821	FOXI2	Q6ZQN5	318 aa		5.74	□□□□□ -1.49
MSI2-218	ENST00000583821	ZNF575	Q86XF7	245 aa		5.74	□□□□□ -1.49
MSI2-218	ENST00000583821	UBE2DNL	Q8IWF7	75 aa		5.74	□□□□□ -1.49
MSI2-218	ENST00000583821	C1orf158	Q8N1D5	194 aa		5.74	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms