RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 RAB7AP51149 207 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 ZNF83P51522 516 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 MFAP2P55001 183 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 KLF3P57682 345 aaPredicted RBP2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 UBE2G2P60604 165 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 RPL8P62917 257 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 AESQ08117 197 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 DNAH14Q0VDD8 3507 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 LAGE3Q14657 143 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 MRPL23Q16540 153 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 GCSAMLQ5JQS6 135 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 MUC21Q5SSG8 566 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 FAM162BQ5T6X4 162 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 C9orf66Q5T8R8 295 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 C9orf135Q5VTT2 229 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 MIC13Q5XKP0 118 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 LEMD1Q68G75 181 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 WDR82Q6UXN9 313 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 Q6ZR03 302 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 USP34Q70CQ2 3546 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 NIT1Q86X76 327 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 TMEM251Q8N6I4 163 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 KIR3DL3Q8N743 410 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 ST6GALNAC3Q8NDV1 305 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 OR4P4Q8NGL7 312 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 RFESDQ8TAC1 157 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 SLC25A40Q8TBP6 338 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 ZNF596Q8TC21 504 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 KLF14Q8TD94 323 aaPredicted RBP2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 TSKUQ8WUA8 353 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 CT55Q8WUE5 264 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 CACNG8Q8WXS5 425 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 SMIM12Q96EX1 92 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 ADTRPQ96IZ2 230 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 TTTY12Q9BZ98 90 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 COMMD5Q9GZQ3 224 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 LINC00574Q9H8X3 128 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 ASCL3Q9NQ33 180 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 TMEM14BQ9NUH8 114 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 ZNF586Q9NXT0 402 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 NAT8BQ9UHF3 227 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 ZNF257Q9Y2Q1 563 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 LAMTOR2Q9Y2Q5 125 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 CACNA1GO43497 2377 aa2.89□□□□□ -1.95
SMCHD1-208ENST00000583344 CACNA1BQ00975 2339 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 CHD3Q12873 2000 aaKnown RBP2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 TRAV9-2A0A087WT02 112 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 IGHV2-26A0A0B4J1V2 119 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 IGHV2-70DA0A0C4DH43 119 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 PSMB11A5LHX3 300 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 C21orf140B9A014 251 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 H0YJW9 148 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 CRXO43186 299 aaPredicted RBP2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 ZNF324O75467 553 aaPredicted RBP2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 LHBP01229 141 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 APCSP02743 223 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 C8orf88P0DMB2 117 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 IGHV1-2P23083 117 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 NPY1RP25929 384 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 CRYBB3P26998 211 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 MPV17P39210 176 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 GNG4P50150 75 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 TAS2R45P59539 299 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 OR5I1Q13606 314 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 GUSBP1Q15486 140 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 MMDQ15546 238 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 Q1RN00 199 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 TIGITQ495A1 244 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 SPATA45Q537H7 98 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 C2orf83Q53S99 150 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 OR8I2Q8N0Y5 310 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 MUC15Q8N387 334 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 MDS2Q8NDY4 140 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 OR8B3Q8NGG8 313 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 OR4S2Q8NH73 311 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 UBALD1Q8TB05 177 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 C18orf32Q8TCD1 76 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 STARD4Q96DR4 205 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 KCNS1Q96KK3 526 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 IGF2BP2-AS1Q96M15 143 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 OR2V2Q96R30 315 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 OR8B2Q96RD0 313 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 NABP2Q9BQ15 211 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 MRPL32Q9BYC8 188 aaKnown RBP2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 SAMD10Q9BYL1 202 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 GAL3ST2Q9H3Q3 398 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 BET1LQ9NYM9 111 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 THYN1Q9P016 225 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 PRNDQ9UKY0 176 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 PSG11Q9UQ72 335 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 KLF13Q9Y2Y9 288 aaPredicted RBP2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 KLF12Q9Y4X4 402 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 SEC16AO15027 2179 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 TECTAO75443 2155 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 CFAP54Q96N23 3096 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 F5P12259 2224 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 UNC13CQ8NB66 2214 aa2.88□□□□□ -1.95
SMCHD1-208ENST00000583344 TRAV30A0A087WSZ9 112 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 TRGV5A0A0B4J1U4 118 aa2.87□□□□□ -1.95
SMCHD1-208ENST00000583344 TRAV3A0A0B4J244 114 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms