RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 POU2AF1Q16633 256 aa5.43□□□□□ -1.54
CCDC47-205ENST00000582331 LCE4AQ5TA78 99 aa5.43□□□□□ -1.54
CCDC47-205ENST00000582331 LILRB2Q8N423 598 aa5.43□□□□□ -1.54
CCDC47-205ENST00000582331 HSD17B11Q8NBQ5 300 aa5.43□□□□□ -1.54
CCDC47-205ENST00000582331 OR1L8Q8NGR8 309 aa5.43□□□□□ -1.54
CCDC47-205ENST00000582331 RNASE11Q8TAA1 199 aaKnown RBP5.43□□□□□ -1.54
CCDC47-205ENST00000582331 VSIRQ9H7M9 311 aa5.43□□□□□ -1.54
CCDC47-205ENST00000582331 HSPB7Q9UBY9 170 aa5.43□□□□□ -1.54
CCDC47-205ENST00000582331 RABAC1Q9UI14 185 aa5.43□□□□□ -1.54
CCDC47-205ENST00000582331 RFNGQ9Y644 331 aa5.43□□□□□ -1.54
CCDC47-205ENST00000582331 IGHV3-66A0A0C4DH42 116 aa5.42□□□□□ -1.54
CCDC47-205ENST00000582331 TMEM218A2RU14 115 aa5.42□□□□□ -1.54
CCDC47-205ENST00000582331 ATG12O94817 140 aa5.42□□□□□ -1.54
CCDC47-205ENST00000582331 HPRT1P00492 218 aa5.42□□□□□ -1.54
CCDC47-205ENST00000582331 KRASP01116 189 aa5.42□□□□□ -1.54
CCDC47-205ENST00000582331 APOHP02749 345 aaPredicted RBP5.42□□□□□ -1.54
CCDC47-205ENST00000582331 IAPPP10997 89 aa5.42□□□□□ -1.54
CCDC47-205ENST00000582331 ATP6V0CP27449 155 aa5.42□□□□□ -1.54
CCDC47-205ENST00000582331 G6PCP35575 357 aa5.42□□□□□ -1.54
CCDC47-205ENST00000582331 SULT1A1P50225 295 aa5.42□□□□□ -1.54
CCDC47-205ENST00000582331 RAB5CP51148 216 aa5.42□□□□□ -1.54
CCDC47-205ENST00000582331 FAM3BP58499 235 aaPredicted RBP5.42□□□□□ -1.54
CCDC47-205ENST00000582331 CLINT1Q14677 625 aa5.42□□□□□ -1.54
CCDC47-205ENST00000582331 AARDQ4LEZ3 155 aa5.42□□□□□ -1.54
CCDC47-205ENST00000582331 ACTL10Q5JWF8 245 aa5.42□□□□□ -1.54
CCDC47-205ENST00000582331 C10orf91Q5T1B1 145 aa5.42□□□□□ -1.54
CCDC47-205ENST00000582331 TMEM14EPQ6UXP3 125 aa5.42□□□□□ -1.54
CCDC47-205ENST00000582331 Q6ZRG5 221 aa5.42□□□□□ -1.54
CCDC47-205ENST00000582331 C6orf223Q8N319 242 aa5.42□□□□□ -1.54
CCDC47-205ENST00000582331 OR5C1Q8NGR4 320 aa5.42□□□□□ -1.54
CCDC47-205ENST00000582331 GRAMD2BQ96HH9 432 aa5.42□□□□□ -1.54
CCDC47-205ENST00000582331 TXN2Q99757 166 aa5.42□□□□□ -1.54
CCDC47-205ENST00000582331 ATP5SQ99766 215 aa5.42□□□□□ -1.54
CCDC47-205ENST00000582331 HINT2Q9BX68 163 aa5.42□□□□□ -1.54
CCDC47-205ENST00000582331 SH3BGRL3Q9H299 93 aa5.42□□□□□ -1.54
CCDC47-205ENST00000582331 RBKSQ9H477 322 aa5.42□□□□□ -1.54
CCDC47-205ENST00000582331 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.42□□□□□ -1.54
CCDC47-205ENST00000582331 TMEM140Q9NV12 185 aa5.42□□□□□ -1.54
CCDC47-205ENST00000582331 PSENENQ9NZ42 101 aa5.42□□□□□ -1.54
CCDC47-205ENST00000582331 STRAPQ9Y3F4 350 aaKnown RBP5.42□□□□□ -1.54
CCDC47-205ENST00000582331 PMS2P5A8MQ11 134 aa5.41□□□□□ -1.54
CCDC47-205ENST00000582331 H3BP45 60 aa5.41□□□□□ -1.54
CCDC47-205ENST00000582331 K7EQG2 157 aa5.41□□□□□ -1.54
CCDC47-205ENST00000582331 ZNF688P0C7X2 276 aa5.41□□□□□ -1.54
CCDC47-205ENST00000582331 ZNF266Q14584 549 aa5.41□□□□□ -1.54
CCDC47-205ENST00000582331 TOMM20LQ6UXN7 152 aa5.41□□□□□ -1.54
CCDC47-205ENST00000582331 SPATA12Q7Z6I5 190 aa5.41□□□□□ -1.54
CCDC47-205ENST00000582331 C1QTNF4Q9BXJ3 329 aa5.41□□□□□ -1.54
CCDC47-205ENST00000582331 KRTAP4-9Q9BYQ8 210 aa5.41□□□□□ -1.54
CCDC47-205ENST00000582331 TMEM231Q9H6L2 316 aa5.41□□□□□ -1.54
CCDC47-205ENST00000582331 NDUFA4L2Q9NRX3 87 aa5.41□□□□□ -1.54
CCDC47-205ENST00000582331 NBDYA0A0U1RRE5 68 aa5.4□□□□□ -1.54
CCDC47-205ENST00000582331 A0A1W2PS18 150 aa5.4□□□□□ -1.54
CCDC47-205ENST00000582331 TMEM189A5PLL7 270 aa5.4□□□□□ -1.54
CCDC47-205ENST00000582331 C9JQL5 133 aa5.4□□□□□ -1.54
CCDC47-205ENST00000582331 I3L2K1 104 aa5.4□□□□□ -1.54
CCDC47-205ENST00000582331 GNG7O60262 68 aa5.4□□□□□ -1.54
CCDC47-205ENST00000582331 METTL15P1P0C7V9 234 aa5.4□□□□□ -1.54
CCDC47-205ENST00000582331 HTN3P15516 51 aa5.4□□□□□ -1.54
CCDC47-205ENST00000582331 ADCYAP1P18509 176 aa5.4□□□□□ -1.54
CCDC47-205ENST00000582331 M6PRP20645 277 aa5.4□□□□□ -1.54
CCDC47-205ENST00000582331 CAMLGP49069 296 aa5.4□□□□□ -1.54
CCDC47-205ENST00000582331 FHITP49789 147 aa5.4□□□□□ -1.54
CCDC47-205ENST00000582331 EMP1P54849 157 aa5.4□□□□□ -1.54
CCDC47-205ENST00000582331 LINC00310P59036 64 aa5.4□□□□□ -1.54
CCDC47-205ENST00000582331 ERVK-16P61578 105 aa5.4□□□□□ -1.54
CCDC47-205ENST00000582331 NUTF2P61970 127 aaKnown RBP5.4□□□□□ -1.54
CCDC47-205ENST00000582331 AKR1C1Q04828 323 aa5.4□□□□□ -1.54
CCDC47-205ENST00000582331 ATRAIDQ6UW56 229 aa5.4□□□□□ -1.54
CCDC47-205ENST00000582331 TMEM182Q6ZP80 229 aaPredicted RBP5.4□□□□□ -1.54
CCDC47-205ENST00000582331 H2BFWTQ7Z2G1 175 aa5.4□□□□□ -1.54
CCDC47-205ENST00000582331 STX12Q86Y82 276 aa5.4□□□□□ -1.54
CCDC47-205ENST00000582331 STXBP6Q8NFX7 210 aa5.4□□□□□ -1.54
CCDC47-205ENST00000582331 OR2G3Q8NGZ4 309 aa5.4□□□□□ -1.54
CCDC47-205ENST00000582331 GNPNAT1Q96EK6 184 aaPredicted RBP5.4□□□□□ -1.54
CCDC47-205ENST00000582331 NIPSNAP3BQ9BS92 247 aa5.4□□□□□ -1.54
CCDC47-205ENST00000582331 ATG101Q9BSB4 218 aa5.4□□□□□ -1.54
CCDC47-205ENST00000582331 PARD6GQ9BYG4 376 aaPredicted RBP5.4□□□□□ -1.54
CCDC47-205ENST00000582331 UQCC1Q9NVA1 299 aa5.4□□□□□ -1.54
CCDC47-205ENST00000582331 XCL2Q9UBD3 114 aa5.4□□□□□ -1.54
CCDC47-205ENST00000582331 CARHSP1Q9Y2V2 147 aaKnown RBP5.4□□□□□ -1.54
CCDC47-205ENST00000582331 OR51B2Q9Y5P1 312 aa5.4□□□□□ -1.54
CCDC47-205ENST00000582331 TEX48A0A1B0GUV7 120 aa5.39□□□□□ -1.55
CCDC47-205ENST00000582331 SMIM9A6NGZ8 99 aa5.39□□□□□ -1.55
CCDC47-205ENST00000582331 MARCH11A6NNE9 402 aa5.39□□□□□ -1.55
CCDC47-205ENST00000582331 UMAD1C9J7I0 102 aa5.39□□□□□ -1.55
CCDC47-205ENST00000582331 AGPAT2O15120 278 aa5.39□□□□□ -1.55
CCDC47-205ENST00000582331 MT-CO2P00403 227 aa5.39□□□□□ -1.55
CCDC47-205ENST00000582331 IFNA5P01569 189 aa5.39□□□□□ -1.55
CCDC47-205ENST00000582331 IGHV3-48P01763 117 aa5.39□□□□□ -1.55
CCDC47-205ENST00000582331 APOC3P02656 99 aa5.39□□□□□ -1.55
CCDC47-205ENST00000582331 NPPCP23582 126 aa5.39□□□□□ -1.55
CCDC47-205ENST00000582331 SNCAP37840 140 aa5.39□□□□□ -1.55
CCDC47-205ENST00000582331 SPANXN5Q5MJ07 72 aa5.39□□□□□ -1.55
CCDC47-205ENST00000582331 TMEM88Q6PEY1 159 aa5.39□□□□□ -1.55
CCDC47-205ENST00000582331 OR1P1Q8NH06 330 aa5.39□□□□□ -1.55
CCDC47-205ENST00000582331 OR52E5Q8NH55 327 aa5.39□□□□□ -1.55
CCDC47-205ENST00000582331 DTD1Q8TEA8 209 aa5.39□□□□□ -1.55
CCDC47-205ENST00000582331 NEU1Q99519 415 aa5.39□□□□□ -1.55
CCDC47-205ENST00000582331 TREM1Q9NP99 234 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms