RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 NRN1Q9NPD7 142 aa7.15□□□□□ -1.26
RFFL-210ENST00000582308 UBQLN2Q9UHD9 624 aa7.15□□□□□ -1.26
RFFL-210ENST00000582308 DNHD1Q96M86 4753 aa7.15□□□□□ -1.27
RFFL-210ENST00000582308 DNAH3Q8TD57 4116 aa7.15□□□□□ -1.27
RFFL-210ENST00000582308 TRBV19A0A075B6N1 114 aa7.14□□□□□ -1.27
RFFL-210ENST00000582308 TRAV1-1A0A0B4J248 108 aa7.14□□□□□ -1.27
RFFL-210ENST00000582308 A0A1B0GV50 99 aa7.14□□□□□ -1.27
RFFL-210ENST00000582308 K7EQG2 157 aa7.14□□□□□ -1.27
RFFL-210ENST00000582308 SOCS3O14543 225 aa7.14□□□□□ -1.27
RFFL-210ENST00000582308 NDUFB4O95168 129 aa7.14□□□□□ -1.27
RFFL-210ENST00000582308 NBEAP1P0C6P0 100 aa7.14□□□□□ -1.27
RFFL-210ENST00000582308 TFPI2P48307 235 aa7.14□□□□□ -1.27
RFFL-210ENST00000582308 UBE2L3P68036 154 aaKnown RBP7.14□□□□□ -1.27
RFFL-210ENST00000582308 CCL20P78556 96 aa7.14□□□□□ -1.27
RFFL-210ENST00000582308 GUCA2BQ16661 112 aa7.14□□□□□ -1.27
RFFL-210ENST00000582308 LCN12Q6JVE5 192 aa7.14□□□□□ -1.27
RFFL-210ENST00000582308 WFDC3Q8IUB2 231 aa7.14□□□□□ -1.27
RFFL-210ENST00000582308 FAM24BQ8N5W8 94 aa7.14□□□□□ -1.27
RFFL-210ENST00000582308 BLNKQ8WV28 456 aa7.14□□□□□ -1.27
RFFL-210ENST00000582308 PCNPQ8WW12 178 aaKnown RBP7.14□□□□□ -1.27
RFFL-210ENST00000582308 GPR61Q9BZJ8 451 aa7.14□□□□□ -1.27
RFFL-210ENST00000582308 ZNF256Q9Y2P7 627 aaPredicted RBP7.14□□□□□ -1.27
RFFL-210ENST00000582308 TRAV2A0A0B4J234 112 aa7.13□□□□□ -1.27
RFFL-210ENST00000582308 TRAV8-2A0A0B4J237 113 aa7.13□□□□□ -1.27
RFFL-210ENST00000582308 G3V4G9 280 aa7.13□□□□□ -1.27
RFFL-210ENST00000582308 DNASE2O00115 360 aaPredicted RBP7.13□□□□□ -1.27
RFFL-210ENST00000582308 SLC17A3O00476 420 aa7.13□□□□□ -1.27
RFFL-210ENST00000582308 NMBP08949 121 aa7.13□□□□□ -1.27
RFFL-210ENST00000582308 KRTAP10-11P60412 298 aa7.13□□□□□ -1.27
RFFL-210ENST00000582308 PAFAH1B2P68402 229 aa7.13□□□□□ -1.27
RFFL-210ENST00000582308 BLOC1S1P78537 153 aa7.13□□□□□ -1.27
RFFL-210ENST00000582308 GUK1Q16774 197 aa7.13□□□□□ -1.27
RFFL-210ENST00000582308 BEAN1Q3B7T3 259 aa7.13□□□□□ -1.27
RFFL-210ENST00000582308 SAMD5Q5TGI4 173 aa7.13□□□□□ -1.27
RFFL-210ENST00000582308 IGFL4Q6B9Z1 124 aa7.13□□□□□ -1.27
RFFL-210ENST00000582308 IQCF2Q8IXL9 164 aa7.13□□□□□ -1.27
RFFL-210ENST00000582308 LYPD6BQ8NI32 183 aa7.13□□□□□ -1.27
RFFL-210ENST00000582308 SPAG8Q99932 426 aaPredicted RBP7.13□□□□□ -1.27
RFFL-210ENST00000582308 HBE1P02100 147 aa7.12□□□□□ -1.27
RFFL-210ENST00000582308 HLA-DMBP28068 263 aa7.12□□□□□ -1.27
RFFL-210ENST00000582308 MEOX2P50222 304 aa7.12□□□□□ -1.27
RFFL-210ENST00000582308 EGFEM1PQ0D2K5 195 aa7.12□□□□□ -1.27
RFFL-210ENST00000582308 PDE6HQ13956 83 aa7.12□□□□□ -1.27
RFFL-210ENST00000582308 ZNF767PQ75MW2 155 aa7.12□□□□□ -1.27
RFFL-210ENST00000582308 LRRC20Q8TCA0 184 aa7.12□□□□□ -1.27
RFFL-210ENST00000582308 C20orf173Q96LM9 149 aa7.12□□□□□ -1.27
RFFL-210ENST00000582308 ZNF331Q9NQX6 463 aaPredicted RBP7.12□□□□□ -1.27
RFFL-210ENST00000582308 TMEM167BQ9NRX6 74 aa7.12□□□□□ -1.27
RFFL-210ENST00000582308 OR4C46A6NHA9 309 aa7.11□□□□□ -1.27
RFFL-210ENST00000582308 ISLRO14498 428 aa7.11□□□□□ -1.27
RFFL-210ENST00000582308 ZNF253O75346 499 aa7.11□□□□□ -1.27
RFFL-210ENST00000582308 ZNF688P0C7X2 276 aa7.11□□□□□ -1.27
RFFL-210ENST00000582308 PSMB3P49720 205 aa7.11□□□□□ -1.27
RFFL-210ENST00000582308 RANP62826 216 aaKnown RBP7.11□□□□□ -1.27
RFFL-210ENST00000582308 EXOC3-AS1Q8N2X6 119 aa7.11□□□□□ -1.27
RFFL-210ENST00000582308 RNF182Q8N6D2 247 aa7.11□□□□□ -1.27
RFFL-210ENST00000582308 C16orf92Q96LL3 132 aa7.11□□□□□ -1.27
RFFL-210ENST00000582308 SLC50A1Q9BRV3 221 aa7.11□□□□□ -1.27
RFFL-210ENST00000582308 YTHDF2Q9Y5A9 579 aaKnown RBP7.11□□□□□ -1.27
RFFL-210ENST00000582308 FAM74A7A6NL05 159 aa7.1□□□□□ -1.27
RFFL-210ENST00000582308 TEX46H3BTG2 121 aa7.1□□□□□ -1.27
RFFL-210ENST00000582308 RGS13O14921 159 aa7.1□□□□□ -1.27
RFFL-210ENST00000582308 CD7P09564 240 aa7.1□□□□□ -1.27
RFFL-210ENST00000582308 ID1P41134 155 aa7.1□□□□□ -1.27
RFFL-210ENST00000582308 UBE2G2P60604 165 aa7.1□□□□□ -1.27
RFFL-210ENST00000582308 PSG9Q00887 426 aa7.1□□□□□ -1.27
RFFL-210ENST00000582308 PMS2P11Q13670 270 aa7.1□□□□□ -1.27
RFFL-210ENST00000582308 ICAM4Q14773 271 aa7.1□□□□□ -1.27
RFFL-210ENST00000582308 PSG3Q16557 428 aa7.1□□□□□ -1.27
RFFL-210ENST00000582308 ODF3L2Q3SX64 289 aa7.1□□□□□ -1.27
RFFL-210ENST00000582308 SAMD13Q5VXD3 122 aa7.1□□□□□ -1.27
RFFL-210ENST00000582308 LYPD1Q8N2G4 141 aa7.1□□□□□ -1.27
RFFL-210ENST00000582308 LINC00052Q96N35 136 aa7.1□□□□□ -1.27
RFFL-210ENST00000582308 Q9H3A6 140 aa7.1□□□□□ -1.27
RFFL-210ENST00000582308 C19orf73Q9NVV2 129 aa7.1□□□□□ -1.27
RFFL-210ENST00000582308 GNG13Q9P2W3 67 aa7.1□□□□□ -1.27
RFFL-210ENST00000582308 A0A1W2PRE2 83 aa7.09□□□□□ -1.27
RFFL-210ENST00000582308 PGPA6NDG6 321 aa7.09□□□□□ -1.27
RFFL-210ENST00000582308 ZNF705FA8MVS1 300 aaPredicted RBP7.09□□□□□ -1.27
RFFL-210ENST00000582308 GGTLC3B5MD39 225 aa7.09□□□□□ -1.27
RFFL-210ENST00000582308 M0R3E3 92 aa7.09□□□□□ -1.27
RFFL-210ENST00000582308 PAGE4O60829 102 aa7.09□□□□□ -1.27
RFFL-210ENST00000582308 PRB4P10163 310 aaPredicted RBP7.09□□□□□ -1.27
RFFL-210ENST00000582308 DEFB131AP59861 70 aa7.09□□□□□ -1.27
RFFL-210ENST00000582308 DEFB1P60022 68 aa7.09□□□□□ -1.27
RFFL-210ENST00000582308 SNRPD3P62318 126 aaKnown RBP7.09□□□□□ -1.27
RFFL-210ENST00000582308 PSMG4Q5JS54 123 aa7.09□□□□□ -1.27
RFFL-210ENST00000582308 KPRPQ5T749 579 aaPredicted RBP7.09□□□□□ -1.27
RFFL-210ENST00000582308 Q8N1Y9 231 aa7.09□□□□□ -1.27
RFFL-210ENST00000582308 PRR25Q96S07 402 aa7.09□□□□□ -1.27
RFFL-210ENST00000582308 MAP6D1Q9H9H5 199 aa7.09□□□□□ -1.27
RFFL-210ENST00000582308 OTORQ9NRC9 128 aa7.09□□□□□ -1.27
RFFL-210ENST00000582308 PRAC2D3DTV9 90 aa7.08□□□□□ -1.28
RFFL-210ENST00000582308 ATP5G3P48201 142 aa7.08□□□□□ -1.28
RFFL-210ENST00000582308 PPT1P50897 306 aa7.08□□□□□ -1.28
RFFL-210ENST00000582308 CD81P60033 236 aa7.08□□□□□ -1.28
RFFL-210ENST00000582308 RAB14P61106 215 aa7.08□□□□□ -1.28
RFFL-210ENST00000582308 SUMO1P63165 101 aaKnown RBP7.08□□□□□ -1.28
RFFL-210ENST00000582308 ZNF124Q15973 351 aa7.08□□□□□ -1.28
RFFL-210ENST00000582308 HAGHQ16775 308 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms