RNA–Protein interactions for RNA: ENST00000582303.1

CDC42EP4-208, Transcript of CDC42 effector protein 4, humanhuman

TSL 5

Gene CDC42EP4, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-208ENST00000582303 TMEM182Q6ZP80 229 aaPredicted RBP10.22□□□□□ -0.77
CDC42EP4-208ENST00000582303 CCDC28AQ8IWP9 274 aa10.22□□□□□ -0.77
CDC42EP4-208ENST00000582303 TMEM263Q8WUH6 116 aaKnown RBP10.22□□□□□ -0.77
CDC42EP4-208ENST00000582303 TRIM63Q969Q1 353 aa10.22□□□□□ -0.77
CDC42EP4-208ENST00000582303 NPVFQ9HCQ7 196 aa10.22□□□□□ -0.77
CDC42EP4-208ENST00000582303 PSENENQ9NZ42 101 aa10.22□□□□□ -0.77
CDC42EP4-208ENST00000582303 MGAT4CQ9UBM8 478 aa10.22□□□□□ -0.77
CDC42EP4-208ENST00000582303 ABCA13Q86UQ4 5058 aa10.21□□□□□ -0.77
CDC42EP4-208ENST00000582303 DLK1P80370 383 aa10.21□□□□□ -0.77
CDC42EP4-208ENST00000582303 TEPPQ6URK8 271 aa10.21□□□□□ -0.77
CDC42EP4-208ENST00000582303 LCN15Q6UWW0 184 aa10.21□□□□□ -0.77
CDC42EP4-208ENST00000582303 RPUSD4Q96CM3 377 aaKnown RBP10.21□□□□□ -0.77
CDC42EP4-208ENST00000582303 ZNF503Q96F45 646 aa10.21□□□□□ -0.77
CDC42EP4-208ENST00000582303 SLC50A1Q9BRV3 221 aa10.21□□□□□ -0.77
CDC42EP4-208ENST00000582303 HSPG2P98160 4391 aa10.21□□□□□ -0.78
CDC42EP4-208ENST00000582303 PLAC8L1A1L4L8 177 aa10.2□□□□□ -0.78
CDC42EP4-208ENST00000582303 H3BMQ9 156 aa10.2□□□□□ -0.78
CDC42EP4-208ENST00000582303 K7EPK0 472 aa10.2□□□□□ -0.78
CDC42EP4-208ENST00000582303 AZU1P20160 251 aa10.2□□□□□ -0.78
CDC42EP4-208ENST00000582303 BTF3P20290 206 aaKnown RBP10.2□□□□□ -0.78
CDC42EP4-208ENST00000582303 INPP1P49441 399 aa10.2□□□□□ -0.78
CDC42EP4-208ENST00000582303 POLR2GP62487 172 aaKnown RBP eCLIP10.2□□□□□ -0.78
CDC42EP4-208ENST00000582303 SSX7Q7RTT5 188 aa10.2□□□□□ -0.78
CDC42EP4-208ENST00000582303 CCDC190Q86UF4 302 aa10.2□□□□□ -0.78
CDC42EP4-208ENST00000582303 OR10P1Q8NGE3 313 aa10.2□□□□□ -0.78
CDC42EP4-208ENST00000582303 SMIM8Q96KF7 97 aa10.2□□□□□ -0.78
CDC42EP4-208ENST00000582303 ARL6Q9H0F7 186 aa10.2□□□□□ -0.78
CDC42EP4-208ENST00000582303 GOSR2O14653 212 aa10.19□□□□□ -0.78
CDC42EP4-208ENST00000582303 SSSCA1O60232 199 aa10.19□□□□□ -0.78
CDC42EP4-208ENST00000582303 PRM2P04554 102 aa10.19□□□□□ -0.78
CDC42EP4-208ENST00000582303 M6PRP20645 277 aa10.19□□□□□ -0.78
CDC42EP4-208ENST00000582303 ZNF546Q86UE3 836 aa10.19□□□□□ -0.78
CDC42EP4-208ENST00000582303 BPIFA4PQ86YQ2 179 aa10.19□□□□□ -0.78
CDC42EP4-208ENST00000582303 MAPKAPK5-AS1Q8N8E1 139 aa10.19□□□□□ -0.78
CDC42EP4-208ENST00000582303 RNASE8Q8TDE3 154 aaKnown RBP10.19□□□□□ -0.78
CDC42EP4-208ENST00000582303 RNF141Q8WVD5 230 aa10.19□□□□□ -0.78
CDC42EP4-208ENST00000582303 GNPNAT1Q96EK6 184 aaPredicted RBP10.19□□□□□ -0.78
CDC42EP4-208ENST00000582303 UHRF2Q96PU4 802 aa10.19□□□□□ -0.78
CDC42EP4-208ENST00000582303 ARV1Q9H2C2 271 aa10.19□□□□□ -0.78
CDC42EP4-208ENST00000582303 NOP10Q9NPE3 64 aaKnown RBP10.19□□□□□ -0.78
CDC42EP4-208ENST00000582303 LINC00588Q9Y4M8 146 aa10.19□□□□□ -0.78
CDC42EP4-208ENST00000582303 NAP1L6A6NFF2 107 aa10.18□□□□□ -0.78
CDC42EP4-208ENST00000582303 RLN2P04090 185 aa10.18□□□□□ -0.78
CDC42EP4-208ENST00000582303 TAS2R30P59541 319 aa10.18□□□□□ -0.78
CDC42EP4-208ENST00000582303 OR5I1Q13606 314 aa10.18□□□□□ -0.78
CDC42EP4-208ENST00000582303 FCN2Q15485 313 aa10.18□□□□□ -0.78
CDC42EP4-208ENST00000582303 GGACTQ9BVM4 153 aa10.18□□□□□ -0.78
CDC42EP4-208ENST00000582303 Q9H8V8 135 aa10.18□□□□□ -0.78
CDC42EP4-208ENST00000582303 A0A1W2PPQ1 181 aa10.17□□□□□ -0.78
CDC42EP4-208ENST00000582303 C9orf170A2RU37 121 aa10.17□□□□□ -0.78
CDC42EP4-208ENST00000582303 PMS2P5A8MQ11 134 aa10.17□□□□□ -0.78
CDC42EP4-208ENST00000582303 SNURFLB1AK76 121 aa10.17□□□□□ -0.78
CDC42EP4-208ENST00000582303 H3BNG1 76 aa10.17□□□□□ -0.78
CDC42EP4-208ENST00000582303 RRAS2P62070 204 aaPredicted RBP10.17□□□□□ -0.78
CDC42EP4-208ENST00000582303 C4orf46Q504U0 113 aa10.17□□□□□ -0.78
CDC42EP4-208ENST00000582303 SPANXN2Q5MJ10 180 aa10.17□□□□□ -0.78
CDC42EP4-208ENST00000582303 LINC00305Q7Z4B0 112 aa10.17□□□□□ -0.78
CDC42EP4-208ENST00000582303 RXFP4Q8TDU9 374 aa10.17□□□□□ -0.78
CDC42EP4-208ENST00000582303 ZNF331Q9NQX6 463 aaPredicted RBP10.17□□□□□ -0.78
CDC42EP4-208ENST00000582303 PXMP4Q9Y6I8 212 aa10.17□□□□□ -0.78
CDC42EP4-208ENST00000582303 V9GYH0 126 aa10.17□□□□□ -0.78
CDC42EP4-208ENST00000582303 NACAE9PAV3 2078 aa10.17□□□□□ -0.78
CDC42EP4-208ENST00000582303 LRP1BQ9NZR2 4599 aa10.17□□□□□ -0.78
CDC42EP4-208ENST00000582303 TRAV26-1A0A087WT03 109 aa10.16□□□□□ -0.78
CDC42EP4-208ENST00000582303 COX7A2P2O60397 106 aa10.16□□□□□ -0.78
CDC42EP4-208ENST00000582303 TSC22D2O75157 780 aa10.16□□□□□ -0.78
CDC42EP4-208ENST00000582303 METTL15P1P0C7V9 234 aa10.16□□□□□ -0.78
CDC42EP4-208ENST00000582303 RAB31Q13636 194 aa10.16□□□□□ -0.78
CDC42EP4-208ENST00000582303 TMEM14EPQ6UXP3 125 aa10.16□□□□□ -0.78
CDC42EP4-208ENST00000582303 Q9H3A6 140 aa10.16□□□□□ -0.78
CDC42EP4-208ENST00000582303 CENPXA8MT69 81 aa10.15□□□□□ -0.78
CDC42EP4-208ENST00000582303 SLC38A11Q08AI6 406 aa10.15□□□□□ -0.78
CDC42EP4-208ENST00000582303 GUK1Q16774 197 aa10.15□□□□□ -0.78
CDC42EP4-208ENST00000582303 TRIQKQ629K1 86 aa10.15□□□□□ -0.78
CDC42EP4-208ENST00000582303 Q6ZRG5 221 aa10.15□□□□□ -0.78
CDC42EP4-208ENST00000582303 UPK3BQ9BT76 320 aa10.15□□□□□ -0.78
CDC42EP4-208ENST00000582303 MRPS12O15235 138 aaKnown RBP10.14□□□□□ -0.79
CDC42EP4-208ENST00000582303 NDUFB6O95139 128 aa10.14□□□□□ -0.79
CDC42EP4-208ENST00000582303 SCGB1D2O95969 90 aa10.14□□□□□ -0.79
CDC42EP4-208ENST00000582303 OR4E1P0C645 316 aa10.14□□□□□ -0.79
CDC42EP4-208ENST00000582303 LEPP41159 167 aa10.14□□□□□ -0.79
CDC42EP4-208ENST00000582303 IAH1Q2TAA2 248 aaPredicted RBP10.14□□□□□ -0.79
CDC42EP4-208ENST00000582303 CNPY1Q3B7I2 92 aa10.14□□□□□ -0.79
CDC42EP4-208ENST00000582303 SPATA12Q7Z6I5 190 aa10.14□□□□□ -0.79
CDC42EP4-208ENST00000582303 ODF3Q96PU9 254 aa10.14□□□□□ -0.79
CDC42EP4-208ENST00000582303 PYGO2Q9BRQ0 406 aa10.14□□□□□ -0.79
CDC42EP4-208ENST00000582303 CCDC160A6NGH7 325 aa10.13□□□□□ -0.79
CDC42EP4-208ENST00000582303 ZNF701M0R085 212 aaPredicted RBP10.13□□□□□ -0.79
CDC42EP4-208ENST00000582303 AGPAT2O15120 278 aa10.13□□□□□ -0.79
CDC42EP4-208ENST00000582303 GFI1BQ5VTD9 330 aa10.13□□□□□ -0.79
CDC42EP4-208ENST00000582303 C10orf113Q5VZT2 155 aa10.13□□□□□ -0.79
CDC42EP4-208ENST00000582303 PATE2Q6UY27 113 aa10.13□□□□□ -0.79
CDC42EP4-208ENST00000582303 Q8N1X5 172 aa10.13□□□□□ -0.79
CDC42EP4-208ENST00000582303 LINC00612Q8N6U2 182 aa10.13□□□□□ -0.79
CDC42EP4-208ENST00000582303 KRTAP4-5Q9BYR2 181 aa10.13□□□□□ -0.79
CDC42EP4-208ENST00000582303 GAGE12BA1L429 117 aa10.12□□□□□ -0.79
CDC42EP4-208ENST00000582303 GAGE7O76087 117 aa10.12□□□□□ -0.79
CDC42EP4-208ENST00000582303 GAGE12FP0CL80 117 aa10.12□□□□□ -0.79
CDC42EP4-208ENST00000582303 GAGE12GP0CL81 117 aa10.12□□□□□ -0.79
CDC42EP4-208ENST00000582303 GAGE12IP0CL82 117 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms