RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 KIAA0100Q14667 2235 aaKnown RBP0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 A0A087WSZ3 146 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 TRAV27A0A087WT01 109 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 LOC110117498A0A087WWA1 95 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 IGLV3-32A0A0A0MS00 114 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 TRAV1-1A0A0B4J248 108 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 TCRBV4S1A1TA0A5B7 111 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 MAP1LC3B2A6NCE7 125 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 E7EUB6 86 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 TMEM256-PLSCR3K7ERE1 68 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 M0R2N4 97 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 M0R378 163 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 GEMIN2O14893 280 aaKnown RBP0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 LYRM1O43325 122 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 HCRTO43612 131 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 LYZL6O75951 148 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 CST7O76096 145 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 GADD45GO95257 159 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 IFNA21P01568 189 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 RNASE3P12724 160 aaKnown RBP0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 SRIP30626 198 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 RPL35P42766 123 aaKnown RBP0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 SSR2P43308 183 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 SRP9P49458 86 aaKnown RBP0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 GNG10P50151 68 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 DYNLT3P51808 116 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 NDUFA6P56556 154 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 LSM3P62310 102 aaKnown RBP0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 CDK6Q00534 326 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 DR1Q01658 176 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 DEFB115Q30KQ5 88 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 C1orf137Q5JT78 98 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 FAM74A1Q5RGS3 127 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 TMEM78Q5T7P6 136 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 FKBP1CQ5VVH2 108 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 C1orf140Q5VVS0 124 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 PPP1R2P3Q6NXS1 205 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 PHF5AQ7RTV0 110 aaKnown RBP0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 PDZD9Q8IXQ8 264 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 OR5AS1Q8N127 324 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 FAM24BQ8N5W8 94 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 ST6GALNAC3Q8NDV1 305 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 OR5D14Q8NGL3 314 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 OR2T35Q8NGX2 323 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 OR10K1Q8NGX5 313 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 SKA2Q8WVK7 121 aaPredicted RBP0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 ANP32BQ92688 251 aaKnown RBP0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 MUCL1Q96DR8 90 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 CCDC32Q9BV29 185 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 REG4Q9BYZ8 158 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 OR2H1Q9GZK4 316 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 TCEAL2Q9H3H9 227 aaPredicted RBP0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 ORMDL1Q9P0S3 153 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 OR52A1Q9UKL2 312 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 PCTPQ9UKL6 214 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 UFC1Q9Y3C8 167 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 C22orf24Q9Y442 160 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 NUBP2Q9Y5Y2 271 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 RTL9Q8NET4 1388 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 LAMA4Q16363 1823 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 PARP14Q460N5 1801 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 CEP164Q9UPV0 1460 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 HELZP42694 1942 aaKnown RBP0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 ZDBF2Q9HCK1 2354 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 KNTC1P50748 2209 aa0.4□□□□□ -2.35
SMCHD1-206ENST00000581631 CNTRLQ7Z7A1 2325 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 MGAMO43451 1857 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 TECPR2O15040 1411 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 PCLOQ9Y6V0 5065 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 AFDNP55196 1824 aaKnown RBP0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 MYH7P12883 1935 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 ARL5CA6NH57 179 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 ZNF736B4DX44 427 aaPredicted RBP0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 TSTD3H0UI37 97 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 M0R233 179 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 INE1O15225 51 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 MFSD11O43934 449 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 ERC2-IT1O76042 136 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 CSN2P05814 226 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 FABP1P07148 127 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 CXCL8P10145 99 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 BCL2P10415 239 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 COX7CP15954 63 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 CRYBA4P53673 196 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 ROMO1P60602 79 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 B2MP61769 119 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 HBBP68871 147 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 MRPS36P82909 103 aaKnown RBP0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 KLRD1Q13241 179 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 SNCBQ16143 134 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 MPV17LQ2QL34 196 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 RNASE10Q5GAN6 216 aaKnown RBP0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 GDF5OSQ5U4N7 250 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 SOSTDC1Q6X4U4 206 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 S100A7AQ86SG5 101 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 TEN1Q86WV5 123 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 PRR15Q8IV56 129 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 SMIM20Q8N5G0 67 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 Q8N814 137 aa0.39□□□□□ -2.35
SMCHD1-206ENST00000581631 OR52R1Q8NGF1 315 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms