RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 NPVFQ9HCQ7 196 aa7.41□□□□□ -1.22
RFFL-209ENST00000581265 PSENENQ9NZ42 101 aa7.41□□□□□ -1.22
RFFL-209ENST00000581265 RNF24Q9Y225 148 aa7.41□□□□□ -1.22
RFFL-209ENST00000581265 TIMM8BQ9Y5J9 83 aaPredicted RBP7.41□□□□□ -1.22
RFFL-209ENST00000581265 C9orf170A2RU37 121 aa7.4□□□□□ -1.22
RFFL-209ENST00000581265 SMCO3A2RU48 225 aa7.4□□□□□ -1.22
RFFL-209ENST00000581265 MRPS12O15235 138 aaKnown RBP7.4□□□□□ -1.22
RFFL-209ENST00000581265 NOL3O60936 208 aaKnown RBP7.4□□□□□ -1.22
RFFL-209ENST00000581265 ADAP1O75689 374 aa7.4□□□□□ -1.22
RFFL-209ENST00000581265 INAFM2P0DMQ5 153 aa7.4□□□□□ -1.22
RFFL-209ENST00000581265 CDKN1BP46527 198 aa7.4□□□□□ -1.22
RFFL-209ENST00000581265 DLK1P80370 383 aa7.4□□□□□ -1.22
RFFL-209ENST00000581265 C4orf46Q504U0 113 aa7.4□□□□□ -1.22
RFFL-209ENST00000581265 TMEM14EPQ6UXP3 125 aa7.4□□□□□ -1.22
RFFL-209ENST00000581265 PATE2Q6UY27 113 aa7.4□□□□□ -1.22
RFFL-209ENST00000581265 LRRC20Q8TCA0 184 aa7.4□□□□□ -1.22
RFFL-209ENST00000581265 RPUSD4Q96CM3 377 aaKnown RBP7.4□□□□□ -1.22
RFFL-209ENST00000581265 C16orf74Q96GX8 76 aa7.4□□□□□ -1.22
RFFL-209ENST00000581265 PPP1R14DQ9NXH3 145 aa7.4□□□□□ -1.22
RFFL-209ENST00000581265 LINC00588Q9Y4M8 146 aa7.4□□□□□ -1.22
RFFL-209ENST00000581265 H7BYZ3 331 aa7.39□□□□□ -1.23
RFFL-209ENST00000581265 HTN1P15515 57 aa7.39□□□□□ -1.23
RFFL-209ENST00000581265 CXCL2P19875 107 aa7.39□□□□□ -1.23
RFFL-209ENST00000581265 ANXA7P20073 488 aaKnown RBP7.39□□□□□ -1.23
RFFL-209ENST00000581265 S100A5P33763 92 aa7.39□□□□□ -1.23
RFFL-209ENST00000581265 PXDC1Q5TGL8 231 aa7.39□□□□□ -1.23
RFFL-209ENST00000581265 TEPPQ6URK8 271 aa7.39□□□□□ -1.23
RFFL-209ENST00000581265 SSX7Q7RTT5 188 aa7.39□□□□□ -1.23
RFFL-209ENST00000581265 CCDC190Q86UF4 302 aa7.39□□□□□ -1.23
RFFL-209ENST00000581265 RNASE8Q8TDE3 154 aaKnown RBP7.39□□□□□ -1.23
RFFL-209ENST00000581265 TMEM263Q8WUH6 116 aaKnown RBP7.39□□□□□ -1.23
RFFL-209ENST00000581265 RNF141Q8WVD5 230 aa7.39□□□□□ -1.23
RFFL-209ENST00000581265 C20orf144Q9BQM9 153 aa7.39□□□□□ -1.23
RFFL-209ENST00000581265 ARL6Q9H0F7 186 aa7.39□□□□□ -1.23
RFFL-209ENST00000581265 ARV1Q9H2C2 271 aa7.39□□□□□ -1.23
RFFL-209ENST00000581265 NOP10Q9NPE3 64 aaKnown RBP7.39□□□□□ -1.23
RFFL-209ENST00000581265 HERC1Q15751 4861 aa7.39□□□□□ -1.23
RFFL-209ENST00000581265 CCNKO75909 580 aa7.38□□□□□ -1.23
RFFL-209ENST00000581265 NDUFB6O95139 128 aa7.38□□□□□ -1.23
RFFL-209ENST00000581265 METTL15P1P0C7V9 234 aa7.38□□□□□ -1.23
RFFL-209ENST00000581265 TAS2R30P59541 319 aa7.38□□□□□ -1.23
RFFL-209ENST00000581265 CLINT1Q14677 625 aa7.38□□□□□ -1.23
RFFL-209ENST00000581265 LCN15Q6UWW0 184 aa7.38□□□□□ -1.23
RFFL-209ENST00000581265 LINC00612Q8N6U2 182 aa7.38□□□□□ -1.23
RFFL-209ENST00000581265 OR10P1Q8NGE3 313 aa7.38□□□□□ -1.23
RFFL-209ENST00000581265 ZNF503Q96F45 646 aa7.38□□□□□ -1.23
RFFL-209ENST00000581265 Q9H8V8 135 aa7.38□□□□□ -1.23
RFFL-209ENST00000581265 ZNF331Q9NQX6 463 aaPredicted RBP7.38□□□□□ -1.23
RFFL-209ENST00000581265 HSPG2P98160 4391 aa7.37□□□□□ -1.23
RFFL-209ENST00000581265 NAP1L6A6NFF2 107 aa7.37□□□□□ -1.23
RFFL-209ENST00000581265 EPM2AB3EWF7 344 aa7.37□□□□□ -1.23
RFFL-209ENST00000581265 GOSR2O14653 212 aa7.37□□□□□ -1.23
RFFL-209ENST00000581265 SSSCA1O60232 199 aa7.37□□□□□ -1.23
RFFL-209ENST00000581265 TSC22D2O75157 780 aa7.37□□□□□ -1.23
RFFL-209ENST00000581265 OR4E1P0C645 316 aa7.37□□□□□ -1.23
RFFL-209ENST00000581265 RRAS2P62070 204 aaPredicted RBP7.37□□□□□ -1.23
RFFL-209ENST00000581265 LINC00305Q7Z4B0 112 aa7.37□□□□□ -1.23
RFFL-209ENST00000581265 OR10J6PQ8NGY7 276 aa7.37□□□□□ -1.23
RFFL-209ENST00000581265 SLC50A1Q9BRV3 221 aa7.37□□□□□ -1.23
RFFL-209ENST00000581265 GGACTQ9BVM4 153 aa7.37□□□□□ -1.23
RFFL-209ENST00000581265 MGAT4CQ9UBM8 478 aa7.37□□□□□ -1.23
RFFL-209ENST00000581265 TRAV26-1A0A087WT03 109 aa7.36□□□□□ -1.23
RFFL-209ENST00000581265 H3BNG1 76 aa7.36□□□□□ -1.23
RFFL-209ENST00000581265 PRB4P10163 310 aaPredicted RBP7.36□□□□□ -1.23
RFFL-209ENST00000581265 M6PRP20645 277 aa7.36□□□□□ -1.23
RFFL-209ENST00000581265 SLC38A11Q08AI6 406 aa7.36□□□□□ -1.23
RFFL-209ENST00000581265 OR5I1Q13606 314 aa7.36□□□□□ -1.23
RFFL-209ENST00000581265 KIR3DS1Q14943 382 aa7.36□□□□□ -1.23
RFFL-209ENST00000581265 ZNF546Q86UE3 836 aa7.36□□□□□ -1.23
RFFL-209ENST00000581265 BPIFA4PQ86YQ2 179 aa7.36□□□□□ -1.23
RFFL-209ENST00000581265 CCDC28AQ8IWP9 274 aa7.36□□□□□ -1.23
RFFL-209ENST00000581265 ZBTB8BQ8NAP8 495 aaPredicted RBP7.36□□□□□ -1.23
RFFL-209ENST00000581265 RXFP4Q8TDU9 374 aa7.36□□□□□ -1.23
RFFL-209ENST00000581265 TMEM37Q8WXS4 190 aa7.36□□□□□ -1.23
RFFL-209ENST00000581265 GNPNAT1Q96EK6 184 aaPredicted RBP7.36□□□□□ -1.23
RFFL-209ENST00000581265 SRRQ9GZT4 340 aa7.36□□□□□ -1.23
RFFL-209ENST00000581265 FLVCR2Q9UPI3 526 aa7.36□□□□□ -1.23
RFFL-209ENST00000581265 C7orf66A4D0T2 115 aa7.35□□□□□ -1.23
RFFL-209ENST00000581265 PRAC2D3DTV9 90 aa7.35□□□□□ -1.23
RFFL-209ENST00000581265 ZNF701M0R085 212 aaPredicted RBP7.35□□□□□ -1.23
RFFL-209ENST00000581265 AGPAT2O15120 278 aa7.35□□□□□ -1.23
RFFL-209ENST00000581265 BTF3P20290 206 aaKnown RBP7.35□□□□□ -1.23
RFFL-209ENST00000581265 HOXA5P20719 270 aa7.35□□□□□ -1.23
RFFL-209ENST00000581265 ARL16Q0P5N6 197 aa7.35□□□□□ -1.23
RFFL-209ENST00000581265 BAK1Q16611 211 aa7.35□□□□□ -1.23
RFFL-209ENST00000581265 IAH1Q2TAA2 248 aaPredicted RBP7.35□□□□□ -1.23
RFFL-209ENST00000581265 TTC32Q5I0X7 151 aa7.35□□□□□ -1.23
RFFL-209ENST00000581265 SPANXN2Q5MJ10 180 aa7.35□□□□□ -1.23
RFFL-209ENST00000581265 GFI1BQ5VTD9 330 aa7.35□□□□□ -1.23
RFFL-209ENST00000581265 SAT2Q96F10 170 aaPredicted RBP7.35□□□□□ -1.23
RFFL-209ENST00000581265 UPK3BQ9BT76 320 aa7.35□□□□□ -1.23
RFFL-209ENST00000581265 Q9H3A6 140 aa7.35□□□□□ -1.23
RFFL-209ENST00000581265 LRP1BQ9NZR2 4599 aa7.35□□□□□ -1.23
RFFL-209ENST00000581265 A0A1W2PPQ1 181 aa7.34□□□□□ -1.23
RFFL-209ENST00000581265 H3BQ15 152 aa7.34□□□□□ -1.23
RFFL-209ENST00000581265 COX7A2P2O60397 106 aa7.34□□□□□ -1.23
RFFL-209ENST00000581265 SNRPCP09234 159 aaKnown RBP7.34□□□□□ -1.23
RFFL-209ENST00000581265 IGLC2P0DOY2 106 aa7.34□□□□□ -1.23
RFFL-209ENST00000581265 DAZ2Q13117 558 aaKnown RBP7.34□□□□□ -1.23
RFFL-209ENST00000581265 ESRGQ1W209 222 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms