RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 ATF4P18848 351 aaPredicted RBP7.79□□□□□ -1.16
CCDC47-203ENST00000580986 PSMB3P49720 205 aa7.79□□□□□ -1.16
CCDC47-203ENST00000580986 LEMD1Q68G75 181 aa7.79□□□□□ -1.16
CCDC47-203ENST00000580986 MIR17HGQ75NE6 70 aa7.79□□□□□ -1.16
CCDC47-203ENST00000580986 SUN5Q8TC36 379 aa7.79□□□□□ -1.16
CCDC47-203ENST00000580986 RAB24Q969Q5 203 aa7.79□□□□□ -1.16
CCDC47-203ENST00000580986 SLC50A1Q9BRV3 221 aa7.79□□□□□ -1.16
CCDC47-203ENST00000580986 OR51M1Q9H341 326 aa7.79□□□□□ -1.16
CCDC47-203ENST00000580986 SMAD5-AS1Q9Y6J3 95 aa7.79□□□□□ -1.16
CCDC47-203ENST00000580986 CXorf1O96002 111 aa7.78□□□□□ -1.16
CCDC47-203ENST00000580986 RPL11P62913 178 aaKnown RBP7.78□□□□□ -1.16
CCDC47-203ENST00000580986 SPATA31B1PQ5VZV4 182 aa7.78□□□□□ -1.16
CCDC47-203ENST00000580986 FAM122CQ6P4D5 195 aa7.78□□□□□ -1.16
CCDC47-203ENST00000580986 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.78□□□□□ -1.16
CCDC47-203ENST00000580986 GTSCR1Q86UQ5 136 aa7.78□□□□□ -1.16
CCDC47-203ENST00000580986 LYPD1Q8N2G4 141 aa7.78□□□□□ -1.16
CCDC47-203ENST00000580986 RNF141Q8WVD5 230 aa7.78□□□□□ -1.16
CCDC47-203ENST00000580986 MBD3L1Q8WWY6 194 aa7.78□□□□□ -1.16
CCDC47-203ENST00000580986 SAT2Q96F10 170 aaPredicted RBP7.78□□□□□ -1.16
CCDC47-203ENST00000580986 ZNF503Q96F45 646 aa7.78□□□□□ -1.16
CCDC47-203ENST00000580986 C17orf77Q96MU5 243 aa7.78□□□□□ -1.16
CCDC47-203ENST00000580986 PAXXQ9BUH6 204 aa7.78□□□□□ -1.16
CCDC47-203ENST00000580986 NBEAL1Q6ZS30 2694 aa7.78□□□□□ -1.16
CCDC47-203ENST00000580986 TRBV19A0A075B6N1 114 aa7.77□□□□□ -1.17
CCDC47-203ENST00000580986 TRAV1-1A0A0B4J248 108 aa7.77□□□□□ -1.17
CCDC47-203ENST00000580986 TRAV5A0A0B4J249 113 aa7.77□□□□□ -1.17
CCDC47-203ENST00000580986 DNASE2O00115 360 aaPredicted RBP7.77□□□□□ -1.17
CCDC47-203ENST00000580986 OR7C2O60412 319 aa7.77□□□□□ -1.17
CCDC47-203ENST00000580986 NBEAP1P0C6P0 100 aa7.77□□□□□ -1.17
CCDC47-203ENST00000580986 ID1P41134 155 aa7.77□□□□□ -1.17
CCDC47-203ENST00000580986 SNRPD3P62318 126 aaKnown RBP7.77□□□□□ -1.17
CCDC47-203ENST00000580986 ZNF726P1Q15940 193 aa7.77□□□□□ -1.17
CCDC47-203ENST00000580986 ARL6IP6Q8N6S5 226 aa7.77□□□□□ -1.17
CCDC47-203ENST00000580986 LRRC20Q8TCA0 184 aa7.77□□□□□ -1.17
CCDC47-203ENST00000580986 FXYD5Q96DB9 178 aa7.77□□□□□ -1.17
CCDC47-203ENST00000580986 ZNF331Q9NQX6 463 aaPredicted RBP7.77□□□□□ -1.17
CCDC47-203ENST00000580986 TMEM167BQ9NRX6 74 aa7.77□□□□□ -1.17
CCDC47-203ENST00000580986 ARL2-SNX15V9GYD0 113 aa7.77□□□□□ -1.17
CCDC47-203ENST00000580986 SORL1Q92673 2214 aa7.76□□□□□ -1.17
CCDC47-203ENST00000580986 H3BQ15 152 aa7.76□□□□□ -1.17
CCDC47-203ENST00000580986 TEX46H3BTG2 121 aa7.76□□□□□ -1.17
CCDC47-203ENST00000580986 ARL14EPLP0DKL9 152 aa7.76□□□□□ -1.17
CCDC47-203ENST00000580986 KRTAP10-11P60412 298 aa7.76□□□□□ -1.17
CCDC47-203ENST00000580986 UBE2L3P68036 154 aaKnown RBP7.76□□□□□ -1.17
CCDC47-203ENST00000580986 PSG9Q00887 426 aa7.76□□□□□ -1.17
CCDC47-203ENST00000580986 PMS2P11Q13670 270 aa7.76□□□□□ -1.17
CCDC47-203ENST00000580986 GUCA2BQ16661 112 aa7.76□□□□□ -1.17
CCDC47-203ENST00000580986 TEX261Q6UWH6 196 aa7.76□□□□□ -1.17
CCDC47-203ENST00000580986 MRPL53Q96EL3 112 aaKnown RBP7.76□□□□□ -1.17
CCDC47-203ENST00000580986 C19orf73Q9NVV2 129 aa7.76□□□□□ -1.17
CCDC47-203ENST00000580986 ZNF586Q9NXT0 402 aa7.76□□□□□ -1.17
CCDC47-203ENST00000580986 MAP1LC3B2A6NCE7 125 aa7.75□□□□□ -1.17
CCDC47-203ENST00000580986 A8MZ25 164 aa7.75□□□□□ -1.17
CCDC47-203ENST00000580986 IFNA7P01567 189 aa7.75□□□□□ -1.17
CCDC47-203ENST00000580986 HBE1P02100 147 aa7.75□□□□□ -1.17
CCDC47-203ENST00000580986 PYYP10082 97 aa7.75□□□□□ -1.17
CCDC47-203ENST00000580986 GCHFRP30047 84 aa7.75□□□□□ -1.17
CCDC47-203ENST00000580986 PPT1P50897 306 aa7.75□□□□□ -1.17
CCDC47-203ENST00000580986 ODF3L2Q3SX64 289 aa7.75□□□□□ -1.17
CCDC47-203ENST00000580986 ALKAL2Q6UX46 152 aa7.75□□□□□ -1.17
CCDC47-203ENST00000580986 SSX7Q7RTT5 188 aa7.75□□□□□ -1.17
CCDC47-203ENST00000580986 FAM213BQ8TBF2 198 aa7.75□□□□□ -1.17
CCDC47-203ENST00000580986 C16orf92Q96LL3 132 aa7.75□□□□□ -1.17
CCDC47-203ENST00000580986 MAP1LC3BQ9GZQ8 125 aa7.75□□□□□ -1.17
CCDC47-203ENST00000580986 MAP6D1Q9H9H5 199 aa7.75□□□□□ -1.17
CCDC47-203ENST00000580986 PRELID1Q9Y255 219 aa7.75□□□□□ -1.17
CCDC47-203ENST00000580986 IGKV3-7A0A075B6H7 116 aa7.74□□□□□ -1.17
CCDC47-203ENST00000580986 OR11H12B2RN74 326 aa7.74□□□□□ -1.17
CCDC47-203ENST00000580986 NDUFB4O95168 129 aa7.74□□□□□ -1.17
CCDC47-203ENST00000580986 OR10J4P0C629 311 aa7.74□□□□□ -1.17
CCDC47-203ENST00000580986 FHITP49789 147 aa7.74□□□□□ -1.17
CCDC47-203ENST00000580986 CD81P60033 236 aa7.74□□□□□ -1.17
CCDC47-203ENST00000580986 BLOC1S1P78537 153 aa7.74□□□□□ -1.17
CCDC47-203ENST00000580986 Q8N1Y9 231 aa7.74□□□□□ -1.17
CCDC47-203ENST00000580986 GBGT1Q8N5D6 347 aa7.74□□□□□ -1.17
CCDC47-203ENST00000580986 ZNF680Q8NEM1 530 aa7.74□□□□□ -1.17
CCDC47-203ENST00000580986 LYPD6BQ8NI32 183 aa7.74□□□□□ -1.17
CCDC47-203ENST00000580986 CLUHP3Q96NS8 147 aa7.74□□□□□ -1.17
CCDC47-203ENST00000580986 NKX6-2Q9C056 277 aaPredicted RBP7.74□□□□□ -1.17
CCDC47-203ENST00000580986 NOTCH1P46531 2555 aa7.73□□□□□ -1.17
CCDC47-203ENST00000580986 TRAV8-2A0A0B4J237 113 aa7.73□□□□□ -1.17
CCDC47-203ENST00000580986 A0A1W2PRE2 83 aa7.73□□□□□ -1.17
CCDC47-203ENST00000580986 ZNF705EA8MWA4 302 aaPredicted RBP7.73□□□□□ -1.17
CCDC47-203ENST00000580986 SLC17A3O00476 420 aa7.73□□□□□ -1.17
CCDC47-203ENST00000580986 CD7P09564 240 aa7.73□□□□□ -1.17
CCDC47-203ENST00000580986 PSG3Q16557 428 aa7.73□□□□□ -1.17
CCDC47-203ENST00000580986 FAM74A1Q5RGS3 127 aa7.73□□□□□ -1.17
CCDC47-203ENST00000580986 FAM24BQ8N5W8 94 aa7.73□□□□□ -1.17
CCDC47-203ENST00000580986 SFT2D1Q8WV19 159 aa7.73□□□□□ -1.17
CCDC47-203ENST00000580986 TCEAL7Q9BRU2 100 aa7.73□□□□□ -1.17
CCDC47-203ENST00000580986 AAMDCQ9H7C9 122 aa7.73□□□□□ -1.17
CCDC47-203ENST00000580986 DNAH3Q8TD57 4116 aa7.73□□□□□ -1.17
CCDC47-203ENST00000580986 A8MTW9 85 aa7.72□□□□□ -1.17
CCDC47-203ENST00000580986 HMGB3O15347 200 aaKnown RBP7.72□□□□□ -1.17
CCDC47-203ENST00000580986 ZNF688P0C7X2 276 aa7.72□□□□□ -1.17
CCDC47-203ENST00000580986 TAGLN2P37802 199 aaKnown RBP7.72□□□□□ -1.17
CCDC47-203ENST00000580986 TFPI2P48307 235 aa7.72□□□□□ -1.17
CCDC47-203ENST00000580986 DEFB131AP59861 70 aa7.72□□□□□ -1.17
CCDC47-203ENST00000580986 FOXI2Q6ZQN5 318 aa7.72□□□□□ -1.17
CCDC47-203ENST00000580986 WFDC3Q8IUB2 231 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms