RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 IL4P05112 153 aa8.29□□□□□ -1.08
TOP3A-209ENST00000580095 LIPFP07098 398 aa8.29□□□□□ -1.08
TOP3A-209ENST00000580095 HTR1DP28221 377 aa8.29□□□□□ -1.08
TOP3A-209ENST00000580095 ADORA2A-AS1P86434 159 aa8.29□□□□□ -1.08
TOP3A-209ENST00000580095 OR10J3Q5JRS4 329 aa8.29□□□□□ -1.08
TOP3A-209ENST00000580095 C5orf17Q8NAS9 161 aa8.29□□□□□ -1.08
TOP3A-209ENST00000580095 TP73-AS1Q9UF72 201 aa8.29□□□□□ -1.08
TOP3A-209ENST00000580095 FCGR2BP31994 310 aaPredicted RBP8.28□□□□□ -1.08
TOP3A-209ENST00000580095 CA7P43166 264 aa8.28□□□□□ -1.08
TOP3A-209ENST00000580095 ZNF479Q96JC4 524 aa8.28□□□□□ -1.08
TOP3A-209ENST00000580095 MLST8Q9BVC4 326 aa8.28□□□□□ -1.08
TOP3A-209ENST00000580095 RPP21Q9H633 154 aaKnown RBP8.28□□□□□ -1.08
TOP3A-209ENST00000580095 CELSR2Q9HCU4 2923 aa8.28□□□□□ -1.08
TOP3A-209ENST00000580095 MUC21A0A0G2JKD1 596 aa8.28□□□□□ -1.08
TOP3A-209ENST00000580095 MUC21A0A140T8X8 626 aa8.28□□□□□ -1.08
TOP3A-209ENST00000580095 K7ERU9 68 aa8.28□□□□□ -1.08
TOP3A-209ENST00000580095 SAP30O75446 220 aa8.28□□□□□ -1.08
TOP3A-209ENST00000580095 HSBP1O75506 76 aa8.28□□□□□ -1.08
TOP3A-209ENST00000580095 RPS20P60866 119 aaKnown RBP8.28□□□□□ -1.08
TOP3A-209ENST00000580095 RHOGP84095 191 aa8.28□□□□□ -1.08
TOP3A-209ENST00000580095 Q56UQ5 140 aa8.28□□□□□ -1.08
TOP3A-209ENST00000580095 MUC21Q5SSG8 566 aa8.28□□□□□ -1.08
TOP3A-209ENST00000580095 IGFL4Q6B9Z1 124 aa8.28□□□□□ -1.08
TOP3A-209ENST00000580095 FAM231DQ6ZW35 169 aa8.28□□□□□ -1.08
TOP3A-209ENST00000580095 DAZAP1Q96EP5 407 aaKnown RBP8.28□□□□□ -1.08
TOP3A-209ENST00000580095 MCRIP2Q9BUT9 160 aaKnown RBP8.28□□□□□ -1.08
TOP3A-209ENST00000580095 KLF12Q9Y4X4 402 aa8.28□□□□□ -1.08
TOP3A-209ENST00000580095 CRYBG3Q68DQ2 2970 aa8.27□□□□□ -1.08
TOP3A-209ENST00000580095 A0A1W2PPR1 153 aa8.27□□□□□ -1.09
TOP3A-209ENST00000580095 LTAP01374 205 aa8.27□□□□□ -1.09
TOP3A-209ENST00000580095 COL8A1P27658 744 aa8.27□□□□□ -1.09
TOP3A-209ENST00000580095 NDPQ00604 133 aa8.27□□□□□ -1.09
TOP3A-209ENST00000580095 SPATA45Q537H7 98 aa8.27□□□□□ -1.09
TOP3A-209ENST00000580095 SSX8Q7RTT4 187 aa8.27□□□□□ -1.09
TOP3A-209ENST00000580095 DPM3Q9P2X0 92 aa8.27□□□□□ -1.09
TOP3A-209ENST00000580095 LAMTOR2Q9Y2Q5 125 aa8.27□□□□□ -1.09
TOP3A-209ENST00000580095 M0R2Z0 102 aa8.27□□□□□ -1.09
TOP3A-209ENST00000580095 SAMD13Q5VXD3 122 aa8.27□□□□□ -1.09
TOP3A-209ENST00000580095 PVRIGQ6DKI7 326 aa8.27□□□□□ -1.09
TOP3A-209ENST00000580095 LINC00173Q6ZV60 143 aa8.27□□□□□ -1.09
TOP3A-209ENST00000580095 TMSB15BA0A087X1C1 80 aa8.26□□□□□ -1.09
TOP3A-209ENST00000580095 ZNF785A8K8V0 405 aa8.26□□□□□ -1.09
TOP3A-209ENST00000580095 NBR2O15453 112 aa8.26□□□□□ -1.09
TOP3A-209ENST00000580095 CRYBA4P53673 196 aa8.26□□□□□ -1.09
TOP3A-209ENST00000580095 EBLN2Q6P2I7 272 aa8.26□□□□□ -1.09
TOP3A-209ENST00000580095 ERASQ7Z444 233 aa8.26□□□□□ -1.09
TOP3A-209ENST00000580095 MSRB2Q9Y3D2 182 aa8.26□□□□□ -1.09
TOP3A-209ENST00000580095 CSMD2Q7Z408 3487 aa8.26□□□□□ -1.09
TOP3A-209ENST00000580095 TRAV26-1A0A087WT03 109 aa8.26□□□□□ -1.09
TOP3A-209ENST00000580095 H0Y8G0 127 aa8.26□□□□□ -1.09
TOP3A-209ENST00000580095 IGLV2-11P01706 119 aa8.26□□□□□ -1.09
TOP3A-209ENST00000580095 CSN3P07498 182 aa8.26□□□□□ -1.09
TOP3A-209ENST00000580095 SPATA12Q7Z6I5 190 aa8.26□□□□□ -1.09
TOP3A-209ENST00000580095 Q86TA4 180 aa8.26□□□□□ -1.09
TOP3A-209ENST00000580095 BORCS7Q96B45 105 aa8.26□□□□□ -1.09
TOP3A-209ENST00000580095 URB1-AS1Q96HZ7 61 aa8.26□□□□□ -1.09
TOP3A-209ENST00000580095 GNG7O60262 68 aa8.26□□□□□ -1.09
TOP3A-209ENST00000580095 ZFP36P26651 326 aaKnown RBP8.26□□□□□ -1.09
TOP3A-209ENST00000580095 CEACAM3P40198 252 aa8.26□□□□□ -1.09
TOP3A-209ENST00000580095 HBBP68871 147 aa8.26□□□□□ -1.09
TOP3A-209ENST00000580095 ZNF491Q8N8L2 437 aa8.26□□□□□ -1.09
TOP3A-209ENST00000580095 CFHR4Q92496 578 aa8.26□□□□□ -1.09
TOP3A-209ENST00000580095 ZC2HC1AQ96GY0 325 aa8.26□□□□□ -1.09
TOP3A-209ENST00000580095 FMC1Q96HJ9 113 aa8.26□□□□□ -1.09
TOP3A-209ENST00000580095 RAB1BQ9H0U4 201 aa8.26□□□□□ -1.09
TOP3A-209ENST00000580095 UTP20O75691 2785 aaKnown RBP8.26□□□□□ -1.09
TOP3A-209ENST00000580095 A8MWL6 223 aa8.25□□□□□ -1.09
TOP3A-209ENST00000580095 RNF125Q96EQ8 232 aa8.25□□□□□ -1.09
TOP3A-209ENST00000580095 MRPL27Q9P0M9 148 aaKnown RBP8.25□□□□□ -1.09
TOP3A-209ENST00000580095 CENPEQ02224 2701 aa8.25□□□□□ -1.09
TOP3A-209ENST00000580095 FLNCQ14315 2725 aa8.25□□□□□ -1.09
TOP3A-209ENST00000580095 CFAP46Q8IYW2 2715 aa8.25□□□□□ -1.09
TOP3A-209ENST00000580095 A0A1B0GV72 72 aa8.25□□□□□ -1.09
TOP3A-209ENST00000580095 A0A1B0GXF2 115 aa8.25□□□□□ -1.09
TOP3A-209ENST00000580095 C19orf71A6NCJ1 209 aa8.25□□□□□ -1.09
TOP3A-209ENST00000580095 OR2T8A6NH00 312 aa8.25□□□□□ -1.09
TOP3A-209ENST00000580095 LY6DQ14210 128 aa8.25□□□□□ -1.09
TOP3A-209ENST00000580095 WIPF2Q8TF74 440 aaPredicted RBP8.25□□□□□ -1.09
TOP3A-209ENST00000580095 PRSS22Q9GZN4 317 aa8.25□□□□□ -1.09
TOP3A-209ENST00000580095 TRBV19A0A075B6N1 114 aa8.24□□□□□ -1.09
TOP3A-209ENST00000580095 FAM181BA6NEQ2 426 aa8.24□□□□□ -1.09
TOP3A-209ENST00000580095 OR2J3O76001 311 aa8.24□□□□□ -1.09
TOP3A-209ENST00000580095 HINT1P49773 126 aaPredicted RBP8.24□□□□□ -1.09
TOP3A-209ENST00000580095 PLP1P60201 277 aa8.24□□□□□ -1.09
TOP3A-209ENST00000580095 VAMP3Q15836 100 aa8.24□□□□□ -1.09
TOP3A-209ENST00000580095 COX19Q49B96 90 aa8.24□□□□□ -1.09
TOP3A-209ENST00000580095 LY6G5BQ8NDX9 201 aa8.24□□□□□ -1.09
TOP3A-209ENST00000580095 TIMD4Q96H15 378 aa8.24□□□□□ -1.09
TOP3A-209ENST00000580095 C8orf49Q96NF6 230 aa8.24□□□□□ -1.09
TOP3A-209ENST00000580095 OTORQ9NRC9 128 aa8.24□□□□□ -1.09
TOP3A-209ENST00000580095 HLA-DRB1P01911 266 aa8.24□□□□□ -1.09
TOP3A-209ENST00000580095 C5orf64Q2M2E5 130 aa8.24□□□□□ -1.09
TOP3A-209ENST00000580095 VMO1Q7Z5L0 202 aa8.24□□□□□ -1.09
TOP3A-209ENST00000580095 FANCD2OSQ96PS1 177 aa8.24□□□□□ -1.09
TOP3A-209ENST00000580095 SHANK2-AS3Q9BTD1 123 aa8.24□□□□□ -1.09
TOP3A-209ENST00000580095 ARMS2P0C7Q2 107 aa8.23□□□□□ -1.09
TOP3A-209ENST00000580095 CTRLP40313 264 aa8.23□□□□□ -1.09
TOP3A-209ENST00000580095 BPIFA4PQ86YQ2 179 aa8.23□□□□□ -1.09
TOP3A-209ENST00000580095 OR4F17Q8NGA8 305 aa8.23□□□□□ -1.09
TOP3A-209ENST00000580095 IGHV3OR16-13A0A075B7E8 117 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms