RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 DYNLRB2Q8TF09 96 aa10.48□□□□□ -0.73
TSEN54-206ENST00000579449 EIF5A2Q9GZV4 153 aaKnown RBP10.48□□□□□ -0.73
TSEN54-206ENST00000579449 SIGLEC8Q9NYZ4 499 aa10.48□□□□□ -0.73
TSEN54-206ENST00000579449 IGKV3-7A0A075B6H7 116 aa10.47□□□□□ -0.73
TSEN54-206ENST00000579449 A0A1W2PRE2 83 aa10.47□□□□□ -0.73
TSEN54-206ENST00000579449 SLC17A3O00476 420 aa10.47□□□□□ -0.73
TSEN54-206ENST00000579449 NDUFB4O95168 129 aa10.47□□□□□ -0.73
TSEN54-206ENST00000579449 RANP62826 216 aaKnown RBP10.47□□□□□ -0.73
TSEN54-206ENST00000579449 RPL11P62913 178 aaKnown RBP10.47□□□□□ -0.73
TSEN54-206ENST00000579449 SRSF3P84103 164 aaKnown RBP10.47□□□□□ -0.73
TSEN54-206ENST00000579449 ICAM4Q14773 271 aa10.47□□□□□ -0.73
TSEN54-206ENST00000579449 ZNF506Q5JVG8 444 aa10.47□□□□□ -0.73
TSEN54-206ENST00000579449 CST9LP1Q5W188 147 aa10.47□□□□□ -0.73
TSEN54-206ENST00000579449 SLC7A5P1Q8MH63 180 aa10.47□□□□□ -0.73
TSEN54-206ENST00000579449 RXFP4Q8TDU9 374 aa10.47□□□□□ -0.73
TSEN54-206ENST00000579449 VAX2Q9UIW0 290 aa10.47□□□□□ -0.73
TSEN54-206ENST00000579449 ARL2-SNX15V9GYD0 113 aa10.47□□□□□ -0.73
TSEN54-206ENST00000579449 TAGLN2P37802 199 aaKnown RBP10.46□□□□□ -0.73
TSEN54-206ENST00000579449 ATP5G3P48201 142 aa10.46□□□□□ -0.73
TSEN54-206ENST00000579449 PDE6HQ13956 83 aa10.46□□□□□ -0.73
TSEN54-206ENST00000579449 NDUFA5Q16718 116 aa10.46□□□□□ -0.73
TSEN54-206ENST00000579449 DEFB114Q30KQ6 69 aa10.46□□□□□ -0.73
TSEN54-206ENST00000579449 SPATA3Q8NHX4 192 aa10.46□□□□□ -0.73
TSEN54-206ENST00000579449 MDFIQ99750 246 aa10.46□□□□□ -0.73
TSEN54-206ENST00000579449 Q9H3A6 140 aa10.46□□□□□ -0.73
TSEN54-206ENST00000579449 COL6A5A8TX70 2615 aa10.46□□□□□ -0.74
TSEN54-206ENST00000579449 PGPA6NDG6 321 aa10.45□□□□□ -0.74
TSEN54-206ENST00000579449 GGTLC3B5MD39 225 aa10.45□□□□□ -0.74
TSEN54-206ENST00000579449 C11orf94C9JXX5 98 aa10.45□□□□□ -0.74
TSEN54-206ENST00000579449 ZNF253O75346 499 aa10.45□□□□□ -0.74
TSEN54-206ENST00000579449 SAP30O75446 220 aa10.45□□□□□ -0.74
TSEN54-206ENST00000579449 CD5P06127 495 aa10.45□□□□□ -0.74
TSEN54-206ENST00000579449 MEOX2P50222 304 aa10.45□□□□□ -0.74
TSEN54-206ENST00000579449 SUMO1P63165 101 aaKnown RBP10.45□□□□□ -0.74
TSEN54-206ENST00000579449 PEA15Q15121 130 aa10.45□□□□□ -0.74
TSEN54-206ENST00000579449 LYPD1Q8N2G4 141 aa10.45□□□□□ -0.74
TSEN54-206ENST00000579449 GBGT1Q8N5D6 347 aa10.45□□□□□ -0.74
TSEN54-206ENST00000579449 NRN1Q9NPD7 142 aa10.45□□□□□ -0.74
TSEN54-206ENST00000579449 ZNF331Q9NQX6 463 aaPredicted RBP10.45□□□□□ -0.74
TSEN54-206ENST00000579449 STAB1Q9NY15 2570 aa10.45□□□□□ -0.74
TSEN54-206ENST00000579449 CD81P60033 236 aa10.44□□□□□ -0.74
TSEN54-206ENST00000579449 PSG9Q00887 426 aa10.44□□□□□ -0.74
TSEN54-206ENST00000579449 MEF2BQ02080 365 aaPredicted RBP10.44□□□□□ -0.74
TSEN54-206ENST00000579449 CD300EQ496F6 205 aaPredicted RBP10.44□□□□□ -0.74
TSEN54-206ENST00000579449 IGFL4Q6B9Z1 124 aa10.44□□□□□ -0.74
TSEN54-206ENST00000579449 WFDC3Q8IUB2 231 aa10.44□□□□□ -0.74
TSEN54-206ENST00000579449 EXOC3-AS1Q8N2X6 119 aa10.44□□□□□ -0.74
TSEN54-206ENST00000579449 TXNDC17Q9BRA2 123 aa10.44□□□□□ -0.74
TSEN54-206ENST00000579449 SLC50A1Q9BRV3 221 aa10.44□□□□□ -0.74
TSEN54-206ENST00000579449 NKX6-2Q9C056 277 aaPredicted RBP10.44□□□□□ -0.74
TSEN54-206ENST00000579449 MS4A6AQ9H2W1 248 aa10.44□□□□□ -0.74
TSEN54-206ENST00000579449 TREM1Q9NP99 234 aa10.44□□□□□ -0.74
TSEN54-206ENST00000579449 OTORQ9NRC9 128 aa10.44□□□□□ -0.74
TSEN54-206ENST00000579449 TRAV8-2A0A0B4J237 113 aa10.43□□□□□ -0.74
TSEN54-206ENST00000579449 C9JQL5 133 aa10.43□□□□□ -0.74
TSEN54-206ENST00000579449 DNASE2O00115 360 aaPredicted RBP10.43□□□□□ -0.74
TSEN54-206ENST00000579449 SOCS3O14543 225 aa10.43□□□□□ -0.74
TSEN54-206ENST00000579449 CD33P20138 364 aa10.43□□□□□ -0.74
TSEN54-206ENST00000579449 HLA-DMBP28068 263 aa10.43□□□□□ -0.74
TSEN54-206ENST00000579449 RIPPLY3P57055 190 aa10.43□□□□□ -0.74
TSEN54-206ENST00000579449 RBPMS2Q6ZRY4 209 aaKnown RBP10.43□□□□□ -0.74
TSEN54-206ENST00000579449 CCDC28AQ8IWP9 274 aa10.43□□□□□ -0.74
TSEN54-206ENST00000579449 TMEM61Q8N0U2 210 aa10.43□□□□□ -0.74
TSEN54-206ENST00000579449 EIF4E3Q8N5X7 224 aaKnown RBP10.43□□□□□ -0.74
TSEN54-206ENST00000579449 C16orf92Q96LL3 132 aa10.43□□□□□ -0.74
TSEN54-206ENST00000579449 AAMDCQ9H7C9 122 aa10.43□□□□□ -0.74
TSEN54-206ENST00000579449 TRAV25A0A0B4J276 109 aa10.42□□□□□ -0.74
TSEN54-206ENST00000579449 IZUMO1RA6ND01 250 aa10.42□□□□□ -0.74
TSEN54-206ENST00000579449 TSPAN4O14817 238 aa10.42□□□□□ -0.74
TSEN54-206ENST00000579449 SLC25A5P05141 298 aaKnown RBP10.42□□□□□ -0.74
TSEN54-206ENST00000579449 SRP19P09132 144 aaKnown RBP10.42□□□□□ -0.74
TSEN54-206ENST00000579449 TFPI2P48307 235 aa10.42□□□□□ -0.74
TSEN54-206ENST00000579449 PAFAH1B2P68402 229 aa10.42□□□□□ -0.74
TSEN54-206ENST00000579449 LCE2DQ5TA82 110 aaPredicted RBP10.42□□□□□ -0.74
TSEN54-206ENST00000579449 UQCC3Q6UW78 93 aa10.42□□□□□ -0.74
TSEN54-206ENST00000579449 RNF182Q8N6D2 247 aa10.42□□□□□ -0.74
TSEN54-206ENST00000579449 DCANP1Q8TF63 244 aa10.42□□□□□ -0.74
TSEN54-206ENST00000579449 SORL1Q92673 2214 aa10.41□□□□□ -0.74
TSEN54-206ENST00000579449 SCO2A0A1W2PP80 73 aa10.41□□□□□ -0.74
TSEN54-206ENST00000579449 K7EQG2 157 aa10.41□□□□□ -0.74
TSEN54-206ENST00000579449 M0R3E3 92 aa10.41□□□□□ -0.74
TSEN54-206ENST00000579449 IGLV1-51P01701 117 aa10.41□□□□□ -0.74
TSEN54-206ENST00000579449 GNG5P63218 68 aa10.41□□□□□ -0.74
TSEN54-206ENST00000579449 C9orf66Q5T8R8 295 aa10.41□□□□□ -0.74
TSEN54-206ENST00000579449 C5orf17Q8NAS9 161 aa10.41□□□□□ -0.74
TSEN54-206ENST00000579449 WFDC9Q8NEX5 89 aa10.41□□□□□ -0.74
TSEN54-206ENST00000579449 C20orf173Q96LM9 149 aa10.41□□□□□ -0.74
TSEN54-206ENST00000579449 CITED4Q96RK1 184 aa10.41□□□□□ -0.74
TSEN54-206ENST00000579449 SMDT1Q9H4I9 107 aa10.41□□□□□ -0.74
TSEN54-206ENST00000579449 VWFP04275 2813 aa10.41□□□□□ -0.74
TSEN54-206ENST00000579449 TRAV2A0A0B4J234 112 aa10.4□□□□□ -0.74
TSEN54-206ENST00000579449 F6UZH7 168 aa10.4□□□□□ -0.74
TSEN54-206ENST00000579449 ISLRO14498 428 aa10.4□□□□□ -0.74
TSEN54-206ENST00000579449 PDE6DO43924 150 aa10.4□□□□□ -0.74
TSEN54-206ENST00000579449 NDUFS6O75380 124 aaKnown RBP10.4□□□□□ -0.74
TSEN54-206ENST00000579449 PRB4P10163 310 aaPredicted RBP10.4□□□□□ -0.74
TSEN54-206ENST00000579449 ID1P41134 155 aa10.4□□□□□ -0.74
TSEN54-206ENST00000579449 PSG3Q16557 428 aa10.4□□□□□ -0.74
TSEN54-206ENST00000579449 SAMD13Q5VXD3 122 aa10.4□□□□□ -0.74
TSEN54-206ENST00000579449 FAM24BQ8N5W8 94 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms