RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 M6PRP20645 277 aa11.32□□□□□ -0.6
IFT20-208ENST00000578985 DEFB1P60022 68 aa11.32□□□□□ -0.6
IFT20-208ENST00000578985 ZNF345Q14585 488 aa11.32□□□□□ -0.6
IFT20-208ENST00000578985 GUK1Q16774 197 aa11.32□□□□□ -0.6
IFT20-208ENST00000578985 FOXI2Q6ZQN5 318 aa11.32□□□□□ -0.6
IFT20-208ENST00000578985 RNF182Q8N6D2 247 aa11.32□□□□□ -0.6
IFT20-208ENST00000578985 OR2G3Q8NGZ4 309 aa11.32□□□□□ -0.6
IFT20-208ENST00000578985 GNPNAT1Q96EK6 184 aaPredicted RBP11.32□□□□□ -0.6
IFT20-208ENST00000578985 SAV1Q9H4B6 383 aaPredicted RBP11.32□□□□□ -0.6
IFT20-208ENST00000578985 RETNQ9HD89 108 aa11.32□□□□□ -0.6
IFT20-208ENST00000578985 CYTL1Q9NRR1 136 aa11.32□□□□□ -0.6
IFT20-208ENST00000578985 A0A0D9SG52 128 aa11.31□□□□□ -0.6
IFT20-208ENST00000578985 H3BMM0 161 aa11.31□□□□□ -0.6
IFT20-208ENST00000578985 JTBO76095 146 aa11.31□□□□□ -0.6
IFT20-208ENST00000578985 PYYP10082 97 aa11.31□□□□□ -0.6
IFT20-208ENST00000578985 HIST1H1EP10412 219 aaKnown RBP11.31□□□□□ -0.6
IFT20-208ENST00000578985 HLA-DRB4P13762 266 aa11.31□□□□□ -0.6
IFT20-208ENST00000578985 HLA-DMBP28068 263 aa11.31□□□□□ -0.6
IFT20-208ENST00000578985 RAB2AP61019 212 aa11.31□□□□□ -0.6
IFT20-208ENST00000578985 PSG3Q16557 428 aa11.31□□□□□ -0.6
IFT20-208ENST00000578985 GDF5OSQ5U4N7 250 aa11.31□□□□□ -0.6
IFT20-208ENST00000578985 EBLN2Q6P2I7 272 aa11.31□□□□□ -0.6
IFT20-208ENST00000578985 AKAP14Q86UN6 197 aa11.31□□□□□ -0.6
IFT20-208ENST00000578985 ZNF738Q8NE65 137 aa11.31□□□□□ -0.6
IFT20-208ENST00000578985 RCHY1Q96PM5 261 aa11.31□□□□□ -0.6
IFT20-208ENST00000578985 SLC50A1Q9BRV3 221 aa11.31□□□□□ -0.6
IFT20-208ENST00000578985 PAXXQ9BUH6 204 aa11.31□□□□□ -0.6
IFT20-208ENST00000578985 SH3BGRL3Q9H299 93 aa11.31□□□□□ -0.6
IFT20-208ENST00000578985 ZNF331Q9NQX6 463 aaPredicted RBP11.31□□□□□ -0.6
IFT20-208ENST00000578985 ZNF586Q9NXT0 402 aa11.31□□□□□ -0.6
IFT20-208ENST00000578985 HLA-DRB4X5D2U9 266 aa11.31□□□□□ -0.6
IFT20-208ENST00000578985 A0A1B0GVG6 124 aa11.3□□□□□ -0.6
IFT20-208ENST00000578985 F6UB75 175 aa11.3□□□□□ -0.6
IFT20-208ENST00000578985 SLC17A3O00476 420 aa11.3□□□□□ -0.6
IFT20-208ENST00000578985 TAS2R45P59539 299 aa11.3□□□□□ -0.6
IFT20-208ENST00000578985 SERF2P84101 59 aa11.3□□□□□ -0.6
IFT20-208ENST00000578985 FAM122CQ6P4D5 195 aa11.3□□□□□ -0.6
IFT20-208ENST00000578985 MORN3Q6PF18 240 aaPredicted RBP11.3□□□□□ -0.6
IFT20-208ENST00000578985 Q6ZWC4 215 aa11.3□□□□□ -0.6
IFT20-208ENST00000578985 OR10G4Q8NGN3 311 aa11.3□□□□□ -0.6
IFT20-208ENST00000578985 OR10G9Q8NGN4 311 aa11.3□□□□□ -0.6
IFT20-208ENST00000578985 OR10G7Q8NGN6 311 aa11.3□□□□□ -0.6
IFT20-208ENST00000578985 SAT2Q96F10 170 aaPredicted RBP11.3□□□□□ -0.6
IFT20-208ENST00000578985 ARPC5LQ9BPX5 153 aa11.3□□□□□ -0.6
IFT20-208ENST00000578985 OR51M1Q9H341 326 aa11.3□□□□□ -0.6
IFT20-208ENST00000578985 NBEAL2Q6ZNJ1 2754 aa11.29□□□□□ -0.6
IFT20-208ENST00000578985 TRBV19A0A075B6N1 114 aa11.29□□□□□ -0.6
IFT20-208ENST00000578985 A0A0J9YX75 114 aa11.29□□□□□ -0.6
IFT20-208ENST00000578985 A0A1W2PPV4 95 aa11.29□□□□□ -0.6
IFT20-208ENST00000578985 OR7C2O60412 319 aa11.29□□□□□ -0.6
IFT20-208ENST00000578985 ZNF253O75346 499 aa11.29□□□□□ -0.6
IFT20-208ENST00000578985 CA1P00915 261 aaPredicted RBP11.29□□□□□ -0.6
IFT20-208ENST00000578985 MBP02144 154 aa11.29□□□□□ -0.6
IFT20-208ENST00000578985 SPP1P10451 314 aa11.29□□□□□ -0.6
IFT20-208ENST00000578985 DEFB135Q30KP9 77 aa11.29□□□□□ -0.6
IFT20-208ENST00000578985 IGKV3-20P01619 116 aa11.28□□□□□ -0.6
IFT20-208ENST00000578985 C1QBP02746 253 aa11.28□□□□□ -0.6
IFT20-208ENST00000578985 OR10J4P0C629 311 aa11.28□□□□□ -0.6
IFT20-208ENST00000578985 NBEAP1P0C6P0 100 aa11.28□□□□□ -0.6
IFT20-208ENST00000578985 KHDC3LQ587J8 217 aa11.28□□□□□ -0.6
IFT20-208ENST00000578985 TMUB2Q71RG4 321 aa11.28□□□□□ -0.6
IFT20-208ENST00000578985 OR4B1Q8NGF8 309 aa11.28□□□□□ -0.6
IFT20-208ENST00000578985 BLNKQ8WV28 456 aa11.28□□□□□ -0.6
IFT20-208ENST00000578985 RNF141Q8WVD5 230 aa11.28□□□□□ -0.6
IFT20-208ENST00000578985 FXYD5Q96DB9 178 aa11.28□□□□□ -0.6
IFT20-208ENST00000578985 OVOL2Q9BRP0 275 aa11.28□□□□□ -0.6
IFT20-208ENST00000578985 CLEC5AQ9NY25 188 aa11.28□□□□□ -0.6
IFT20-208ENST00000578985 TP53TG1Q9Y2A0 90 aa11.28□□□□□ -0.6
IFT20-208ENST00000578985 KANTRA0A1W2PQU2 76 aa11.27□□□□□ -0.61
IFT20-208ENST00000578985 BCL2L11O43521 198 aa11.27□□□□□ -0.61
IFT20-208ENST00000578985 SPRY2O43597 315 aa11.27□□□□□ -0.61
IFT20-208ENST00000578985 EIF3GO75821 320 aaKnown RBP eCLIP11.27□□□□□ -0.61
IFT20-208ENST00000578985 DUSP14O95147 198 aaKnown RBP11.27□□□□□ -0.61
IFT20-208ENST00000578985 NDUFB4O95168 129 aa11.27□□□□□ -0.61
IFT20-208ENST00000578985 GIG44P09565 113 aaPredicted RBP11.27□□□□□ -0.61
IFT20-208ENST00000578985 PSG9Q00887 426 aa11.27□□□□□ -0.61
IFT20-208ENST00000578985 PDE6HQ13956 83 aa11.27□□□□□ -0.61
IFT20-208ENST00000578985 TMEM41BQ5BJD5 291 aa11.27□□□□□ -0.61
IFT20-208ENST00000578985 RPUSD4Q96CM3 377 aaKnown RBP11.27□□□□□ -0.61
IFT20-208ENST00000578985 RNF183Q96D59 192 aa11.27□□□□□ -0.61
IFT20-208ENST00000578985 ZNF503Q96F45 646 aa11.27□□□□□ -0.61
IFT20-208ENST00000578985 CLUHP3Q96NS8 147 aa11.27□□□□□ -0.61
IFT20-208ENST00000578985 ZNF705FA8MVS1 300 aaPredicted RBP11.26□□□□□ -0.61
IFT20-208ENST00000578985 PFDN1O60925 122 aa11.26□□□□□ -0.61
IFT20-208ENST00000578985 C4BPBP20851 252 aa11.26□□□□□ -0.61
IFT20-208ENST00000578985 CDC34P49427 236 aaPredicted RBP11.26□□□□□ -0.61
IFT20-208ENST00000578985 NUTF2P61970 127 aaKnown RBP11.26□□□□□ -0.61
IFT20-208ENST00000578985 UBE2L3P68036 154 aaKnown RBP11.26□□□□□ -0.61
IFT20-208ENST00000578985 RPP25LQ8N5L8 163 aaKnown RBP11.26□□□□□ -0.61
IFT20-208ENST00000578985 OR8A1Q8NGG7 326 aa11.26□□□□□ -0.61
IFT20-208ENST00000578985 ZNF471Q9BX82 626 aaPredicted RBP11.26□□□□□ -0.61
IFT20-208ENST00000578985 A8MTW9 85 aa11.25□□□□□ -0.61
IFT20-208ENST00000578985 HMGB3O15347 200 aaKnown RBP11.25□□□□□ -0.61
IFT20-208ENST00000578985 ZNF705DP0CH99 300 aaPredicted RBP11.25□□□□□ -0.61
IFT20-208ENST00000578985 ZNF705BP0CI00 300 aaPredicted RBP11.25□□□□□ -0.61
IFT20-208ENST00000578985 PRB4P10163 310 aaPredicted RBP11.25□□□□□ -0.61
IFT20-208ENST00000578985 HIST1H1AQ02539 215 aaPredicted RBP11.25□□□□□ -0.61
IFT20-208ENST00000578985 CD300CQ08708 224 aa11.25□□□□□ -0.61
IFT20-208ENST00000578985 PQLC2Q6ZP29 291 aa11.25□□□□□ -0.61
IFT20-208ENST00000578985 RAB24Q969Q5 203 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms