RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 ARL6Q9H0F7 186 aa6.27□□□□□ -1.41
GGA3-207ENST00000578896 PPP1R14DQ9NXH3 145 aa6.27□□□□□ -1.41
GGA3-207ENST00000578896 PIGBOS1A0A0B4J2F0 54 aa6.26□□□□□ -1.41
GGA3-207ENST00000578896 LYRM9A8MSI8 78 aa6.26□□□□□ -1.41
GGA3-207ENST00000578896 PRAC2D3DTV9 90 aa6.26□□□□□ -1.41
GGA3-207ENST00000578896 J3KRW8 73 aa6.26□□□□□ -1.41
GGA3-207ENST00000578896 MRPS12O15235 138 aaKnown RBP6.26□□□□□ -1.41
GGA3-207ENST00000578896 OR4E1P0C645 316 aa6.26□□□□□ -1.41
GGA3-207ENST00000578896 RPL7P18124 248 aaKnown RBP6.26□□□□□ -1.41
GGA3-207ENST00000578896 SOHLH1Q5JUK2 328 aa6.26□□□□□ -1.41
GGA3-207ENST00000578896 TMEM14EPQ6UXP3 125 aa6.26□□□□□ -1.41
GGA3-207ENST00000578896 RPUSD4Q96CM3 377 aaKnown RBP6.26□□□□□ -1.41
GGA3-207ENST00000578896 SMIM8Q96KF7 97 aa6.26□□□□□ -1.41
GGA3-207ENST00000578896 ARV1Q9H2C2 271 aa6.26□□□□□ -1.41
GGA3-207ENST00000578896 NOP10Q9NPE3 64 aaKnown RBP6.26□□□□□ -1.41
GGA3-207ENST00000578896 GSKIPQ9P0R6 139 aa6.26□□□□□ -1.41
GGA3-207ENST00000578896 NDUFB6O95139 128 aa6.25□□□□□ -1.41
GGA3-207ENST00000578896 INPP1P49441 399 aa6.25□□□□□ -1.41
GGA3-207ENST00000578896 PLP1P60201 277 aa6.25□□□□□ -1.41
GGA3-207ENST00000578896 DLK1P80370 383 aa6.25□□□□□ -1.41
GGA3-207ENST00000578896 IAH1Q2TAA2 248 aaPredicted RBP6.25□□□□□ -1.41
GGA3-207ENST00000578896 C4orf46Q504U0 113 aa6.25□□□□□ -1.41
GGA3-207ENST00000578896 MORN5Q5VZ52 161 aa6.25□□□□□ -1.41
GGA3-207ENST00000578896 C15orf53Q8NAA6 179 aa6.25□□□□□ -1.41
GGA3-207ENST00000578896 ZNRF2Q8NHG8 242 aa6.25□□□□□ -1.41
GGA3-207ENST00000578896 RNF141Q8WVD5 230 aa6.25□□□□□ -1.41
GGA3-207ENST00000578896 SDHCQ99643 169 aaPredicted RBP6.25□□□□□ -1.41
GGA3-207ENST00000578896 NPVFQ9HCQ7 196 aa6.25□□□□□ -1.41
GGA3-207ENST00000578896 LINC00588Q9Y4M8 146 aa6.25□□□□□ -1.41
GGA3-207ENST00000578896 A0A087X0K7 114 aa6.24□□□□□ -1.41
GGA3-207ENST00000578896 TRAV5A0A0B4J249 113 aa6.24□□□□□ -1.41
GGA3-207ENST00000578896 A0A0J9YY99 117 aa6.24□□□□□ -1.41
GGA3-207ENST00000578896 NBDYA0A0U1RRE5 68 aa6.24□□□□□ -1.41
GGA3-207ENST00000578896 SLC17A3O00476 420 aa6.24□□□□□ -1.41
GGA3-207ENST00000578896 CCSO14618 274 aa6.24□□□□□ -1.41
GGA3-207ENST00000578896 AGPAT2O15120 278 aa6.24□□□□□ -1.41
GGA3-207ENST00000578896 ATP5G1P05496 136 aa6.24□□□□□ -1.41
GGA3-207ENST00000578896 TSPOP30536 169 aa6.24□□□□□ -1.41
GGA3-207ENST00000578896 S100A7P31151 101 aa6.24□□□□□ -1.41
GGA3-207ENST00000578896 BTCP35070 178 aa6.24□□□□□ -1.41
GGA3-207ENST00000578896 ATP5G3P48201 142 aa6.24□□□□□ -1.41
GGA3-207ENST00000578896 TAS2R60P59551 318 aa6.24□□□□□ -1.41
GGA3-207ENST00000578896 OR5I1Q13606 314 aa6.24□□□□□ -1.41
GGA3-207ENST00000578896 TRIQKQ629K1 86 aa6.24□□□□□ -1.41
GGA3-207ENST00000578896 LINC00305Q7Z4B0 112 aa6.24□□□□□ -1.41
GGA3-207ENST00000578896 ZBTB8BQ8NAP8 495 aaPredicted RBP6.24□□□□□ -1.41
GGA3-207ENST00000578896 OR10P1Q8NGE3 313 aa6.24□□□□□ -1.41
GGA3-207ENST00000578896 TMEM37Q8WXS4 190 aa6.24□□□□□ -1.41
GGA3-207ENST00000578896 MGAT4CQ9UBM8 478 aa6.24□□□□□ -1.41
GGA3-207ENST00000578896 RCL1Q9Y2P8 373 aaKnown RBP6.24□□□□□ -1.41
GGA3-207ENST00000578896 C7orf66A4D0T2 115 aa6.23□□□□□ -1.41
GGA3-207ENST00000578896 CBY3A6NI87 242 aa6.23□□□□□ -1.41
GGA3-207ENST00000578896 C16orf90A8MZG2 172 aa6.23□□□□□ -1.41
GGA3-207ENST00000578896 GOSR2O14653 212 aa6.23□□□□□ -1.41
GGA3-207ENST00000578896 MBPP02686 304 aaPredicted RBP6.23□□□□□ -1.41
GGA3-207ENST00000578896 CDKN1BP46527 198 aa6.23□□□□□ -1.41
GGA3-207ENST00000578896 B2MP61769 119 aa6.23□□□□□ -1.41
GGA3-207ENST00000578896 SELENOTP62341 195 aa6.23□□□□□ -1.41
GGA3-207ENST00000578896 OPCMLQ14982 345 aa6.23□□□□□ -1.41
GGA3-207ENST00000578896 SPANXN2Q5MJ10 180 aa6.23□□□□□ -1.41
GGA3-207ENST00000578896 GFI1BQ5VTD9 330 aa6.23□□□□□ -1.41
GGA3-207ENST00000578896 TEPPQ6URK8 271 aa6.23□□□□□ -1.41
GGA3-207ENST00000578896 C6orf223Q8N319 242 aa6.23□□□□□ -1.41
GGA3-207ENST00000578896 MGST2Q99735 147 aa6.23□□□□□ -1.41
GGA3-207ENST00000578896 RBM38Q9H0Z9 239 aaKnown RBP6.23□□□□□ -1.41
GGA3-207ENST00000578896 ZNF331Q9NQX6 463 aaPredicted RBP6.23□□□□□ -1.41
GGA3-207ENST00000578896 TIMM8BQ9Y5J9 83 aaPredicted RBP6.23□□□□□ -1.41
GGA3-207ENST00000578896 FAT1Q14517 4588 aa6.23□□□□□ -1.41
GGA3-207ENST00000578896 TRAV26-1A0A087WT03 109 aa6.22□□□□□ -1.41
GGA3-207ENST00000578896 GAGE12BA1L429 117 aa6.22□□□□□ -1.41
GGA3-207ENST00000578896 NAP1L6A6NFF2 107 aa6.22□□□□□ -1.41
GGA3-207ENST00000578896 FAM24AA6NFZ4 105 aa6.22□□□□□ -1.41
GGA3-207ENST00000578896 FAM25EA8MYX2 175 aa6.22□□□□□ -1.41
GGA3-207ENST00000578896 H3BQ15 152 aa6.22□□□□□ -1.41
GGA3-207ENST00000578896 COX7A2P2O60397 106 aa6.22□□□□□ -1.41
GGA3-207ENST00000578896 GAGE7O76087 117 aa6.22□□□□□ -1.41
GGA3-207ENST00000578896 GAGE12FP0CL80 117 aa6.22□□□□□ -1.41
GGA3-207ENST00000578896 GAGE12GP0CL81 117 aa6.22□□□□□ -1.41
GGA3-207ENST00000578896 GAGE12IP0CL82 117 aa6.22□□□□□ -1.41
GGA3-207ENST00000578896 HOXA5P20719 270 aa6.22□□□□□ -1.41
GGA3-207ENST00000578896 CCL18P55774 89 aa6.22□□□□□ -1.41
GGA3-207ENST00000578896 CLINT1Q14677 625 aa6.22□□□□□ -1.41
GGA3-207ENST00000578896 MIC13Q5XKP0 118 aa6.22□□□□□ -1.41
GGA3-207ENST00000578896 SSX7Q7RTT5 188 aa6.22□□□□□ -1.41
GGA3-207ENST00000578896 TMEM256Q8N2U0 113 aa6.22□□□□□ -1.41
GGA3-207ENST00000578896 RNASE8Q8TDE3 154 aaKnown RBP6.22□□□□□ -1.41
GGA3-207ENST00000578896 DEDD2Q8WXF8 326 aa6.22□□□□□ -1.41
GGA3-207ENST00000578896 C16orf74Q96GX8 76 aa6.22□□□□□ -1.41
GGA3-207ENST00000578896 LSM5Q9Y4Y9 91 aaKnown RBP6.22□□□□□ -1.41
GGA3-207ENST00000578896 TRAV12-3A0A0B4J271 114 aa6.21□□□□□ -1.42
GGA3-207ENST00000578896 K7EPK0 472 aa6.21□□□□□ -1.42
GGA3-207ENST00000578896 L7N2F9 121 aa6.21□□□□□ -1.42
GGA3-207ENST00000578896 TSC22D2O75157 780 aa6.21□□□□□ -1.42
GGA3-207ENST00000578896 CST7O76096 145 aa6.21□□□□□ -1.42
GGA3-207ENST00000578896 CT45A10P0DMU9 189 aa6.21□□□□□ -1.42
GGA3-207ENST00000578896 BCAP31P51572 246 aa6.21□□□□□ -1.42
GGA3-207ENST00000578896 FAM3BP58499 235 aaPredicted RBP6.21□□□□□ -1.42
GGA3-207ENST00000578896 VAMP2P63027 116 aa6.21□□□□□ -1.42
GGA3-207ENST00000578896 ERCC8Q13216 396 aa6.21□□□□□ -1.42
GGA3-207ENST00000578896 C10orf113Q5VZT2 155 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms