RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 RAB5CP51148 216 aa9.09□□□□□ -0.95
IFT20-207ENST00000578547 EGFEM1PQ0D2K5 195 aa9.09□□□□□ -0.95
IFT20-207ENST00000578547 KPRPQ5T749 579 aaPredicted RBP9.09□□□□□ -0.95
IFT20-207ENST00000578547 DPPA3Q6W0C5 159 aa9.09□□□□□ -0.95
IFT20-207ENST00000578547 PQLC2Q6ZP29 291 aa9.09□□□□□ -0.95
IFT20-207ENST00000578547 FAM24BQ8N5W8 94 aa9.09□□□□□ -0.95
IFT20-207ENST00000578547 DCANP1Q8TF63 244 aa9.09□□□□□ -0.95
IFT20-207ENST00000578547 RNF141Q8WVD5 230 aa9.09□□□□□ -0.95
IFT20-207ENST00000578547 FXYD5Q96DB9 178 aa9.09□□□□□ -0.95
IFT20-207ENST00000578547 C16orf92Q96LL3 132 aa9.09□□□□□ -0.95
IFT20-207ENST00000578547 C17orf77Q96MU5 243 aa9.09□□□□□ -0.95
IFT20-207ENST00000578547 ZNF586Q9NXT0 402 aa9.09□□□□□ -0.95
IFT20-207ENST00000578547 UBQLN2Q9UHD9 624 aa9.09□□□□□ -0.95
IFT20-207ENST00000578547 ZNF705EA8MWA4 302 aaPredicted RBP9.08□□□□□ -0.96
IFT20-207ENST00000578547 K7EQG2 157 aa9.08□□□□□ -0.96
IFT20-207ENST00000578547 SLC17A3O00476 420 aa9.08□□□□□ -0.96
IFT20-207ENST00000578547 CXorf1O96002 111 aa9.08□□□□□ -0.96
IFT20-207ENST00000578547 H2AFB1P0C5Y9 115 aa9.08□□□□□ -0.96
IFT20-207ENST00000578547 HIST1H1EP10412 219 aaKnown RBP9.08□□□□□ -0.96
IFT20-207ENST00000578547 GCHFRP30047 84 aa9.08□□□□□ -0.96
IFT20-207ENST00000578547 CD81P60033 236 aa9.08□□□□□ -0.96
IFT20-207ENST00000578547 GUK1Q16774 197 aa9.08□□□□□ -0.96
IFT20-207ENST00000578547 IGFL4Q6B9Z1 124 aa9.08□□□□□ -0.96
IFT20-207ENST00000578547 TEX261Q6UWH6 196 aa9.08□□□□□ -0.96
IFT20-207ENST00000578547 GTSCR1Q86UQ5 136 aa9.08□□□□□ -0.96
IFT20-207ENST00000578547 SFT2D1Q8WV19 159 aa9.08□□□□□ -0.96
IFT20-207ENST00000578547 HRH4Q9H3N8 390 aa9.08□□□□□ -0.96
IFT20-207ENST00000578547 ZMAT5Q9UDW3 170 aaKnown RBP9.08□□□□□ -0.96
IFT20-207ENST00000578547 TRBV19A0A075B6N1 114 aa9.07□□□□□ -0.96
IFT20-207ENST00000578547 TRAV2A0A0B4J234 112 aa9.07□□□□□ -0.96
IFT20-207ENST00000578547 PRB2P02812 416 aaPredicted RBP9.07□□□□□ -0.96
IFT20-207ENST00000578547 CD7P09564 240 aa9.07□□□□□ -0.96
IFT20-207ENST00000578547 NBEAP1P0C6P0 100 aa9.07□□□□□ -0.96
IFT20-207ENST00000578547 SNRPD3P62318 126 aaKnown RBP9.07□□□□□ -0.96
IFT20-207ENST00000578547 PSMG4Q5JS54 123 aa9.07□□□□□ -0.96
IFT20-207ENST00000578547 SAMD13Q5VXD3 122 aa9.07□□□□□ -0.96
IFT20-207ENST00000578547 RNF182Q8N6D2 247 aa9.07□□□□□ -0.96
IFT20-207ENST00000578547 LINC00052Q96N35 136 aa9.07□□□□□ -0.96
IFT20-207ENST00000578547 TMPRSS5Q9H3S3 457 aa9.07□□□□□ -0.96
IFT20-207ENST00000578547 ISLRO14498 428 aa9.06□□□□□ -0.96
IFT20-207ENST00000578547 SOCS3O14543 225 aa9.06□□□□□ -0.96
IFT20-207ENST00000578547 IFNA7P01567 189 aa9.06□□□□□ -0.96
IFT20-207ENST00000578547 PRB4P10163 310 aaPredicted RBP9.06□□□□□ -0.96
IFT20-207ENST00000578547 HLA-DMBP28068 263 aa9.06□□□□□ -0.96
IFT20-207ENST00000578547 ID1P41134 155 aa9.06□□□□□ -0.96
IFT20-207ENST00000578547 PSMB3P49720 205 aa9.06□□□□□ -0.96
IFT20-207ENST00000578547 ODF3L2Q3SX64 289 aa9.06□□□□□ -0.96
IFT20-207ENST00000578547 ZNF680Q8NEM1 530 aa9.06□□□□□ -0.96
IFT20-207ENST00000578547 SLC50A1Q9BRV3 221 aa9.06□□□□□ -0.96
IFT20-207ENST00000578547 WFDC10AQ9H1F0 79 aa9.06□□□□□ -0.96
IFT20-207ENST00000578547 MAP6D1Q9H9H5 199 aa9.06□□□□□ -0.96
IFT20-207ENST00000578547 SORL1Q92673 2214 aa9.05□□□□□ -0.96
IFT20-207ENST00000578547 DNAH3Q8TD57 4116 aa9.05□□□□□ -0.96
IFT20-207ENST00000578547 TRAV8-2A0A0B4J237 113 aa9.05□□□□□ -0.96
IFT20-207ENST00000578547 OR11H12B2RN74 326 aa9.05□□□□□ -0.96
IFT20-207ENST00000578547 NDUFB4O95168 129 aa9.05□□□□□ -0.96
IFT20-207ENST00000578547 DEFB131AP59861 70 aa9.05□□□□□ -0.96
IFT20-207ENST00000578547 UBE2G2P60604 165 aa9.05□□□□□ -0.96
IFT20-207ENST00000578547 RANP62826 216 aaKnown RBP9.05□□□□□ -0.96
IFT20-207ENST00000578547 APRG1Q8IVJ8 170 aa9.05□□□□□ -0.96
IFT20-207ENST00000578547 EXOC3-AS1Q8N2X6 119 aa9.05□□□□□ -0.96
IFT20-207ENST00000578547 PCNPQ8WW12 178 aaKnown RBP9.05□□□□□ -0.96
IFT20-207ENST00000578547 MBD3L1Q8WWY6 194 aa9.05□□□□□ -0.96
IFT20-207ENST00000578547 SAT2Q96F10 170 aaPredicted RBP9.05□□□□□ -0.96
IFT20-207ENST00000578547 C20orf173Q96LM9 149 aa9.05□□□□□ -0.96
IFT20-207ENST00000578547 ZNF331Q9NQX6 463 aaPredicted RBP9.05□□□□□ -0.96
IFT20-207ENST00000578547 TMEM167BQ9NRX6 74 aa9.05□□□□□ -0.96
IFT20-207ENST00000578547 TEX46H3BTG2 121 aa9.04□□□□□ -0.96
IFT20-207ENST00000578547 HBE1P02100 147 aa9.04□□□□□ -0.96
IFT20-207ENST00000578547 PSG9Q00887 426 aa9.04□□□□□ -0.96
IFT20-207ENST00000578547 PDE6HQ13956 83 aa9.04□□□□□ -0.96
IFT20-207ENST00000578547 ICAM4Q14773 271 aa9.04□□□□□ -0.96
IFT20-207ENST00000578547 ZNF124Q15973 351 aa9.04□□□□□ -0.96
IFT20-207ENST00000578547 ZNF738Q8NE65 137 aa9.04□□□□□ -0.96
IFT20-207ENST00000578547 Q9H3A6 140 aa9.04□□□□□ -0.96
IFT20-207ENST00000578547 AAMDCQ9H7C9 122 aa9.04□□□□□ -0.96
IFT20-207ENST00000578547 ZNF253O75346 499 aa9.03□□□□□ -0.96
IFT20-207ENST00000578547 DEFB1P60022 68 aa9.03□□□□□ -0.96
IFT20-207ENST00000578547 BLOC1S1P78537 153 aa9.03□□□□□ -0.96
IFT20-207ENST00000578547 CCL20P78556 96 aa9.03□□□□□ -0.96
IFT20-207ENST00000578547 DEFB125Q8N687 156 aa9.03□□□□□ -0.96
IFT20-207ENST00000578547 AURKAIP1Q9NWT8 199 aaPredicted RBP9.03□□□□□ -0.96
IFT20-207ENST00000578547 RPH3ALQ9UNE2 315 aa9.03□□□□□ -0.96
IFT20-207ENST00000578547 KNCNA6PVL3 124 aa9.02□□□□□ -0.97
IFT20-207ENST00000578547 ZNF705FA8MVS1 300 aaPredicted RBP9.02□□□□□ -0.97
IFT20-207ENST00000578547 M0R3E3 92 aa9.02□□□□□ -0.97
IFT20-207ENST00000578547 CMC4P56277 68 aaPredicted RBP9.02□□□□□ -0.97
IFT20-207ENST00000578547 PSG3Q16557 428 aa9.02□□□□□ -0.97
IFT20-207ENST00000578547 GNG13Q9P2W3 67 aa9.02□□□□□ -0.97
IFT20-207ENST00000578547 YTHDF2Q9Y5A9 579 aaKnown RBP9.02□□□□□ -0.97
IFT20-207ENST00000578547 FBN3Q75N90 2809 aa9.01□□□□□ -0.97
IFT20-207ENST00000578547 MEGF8Q7Z7M0 2845 aa9.01□□□□□ -0.97
IFT20-207ENST00000578547 TRAV1-1A0A0B4J248 108 aa9.01□□□□□ -0.97
IFT20-207ENST00000578547 PGPA6NDG6 321 aa9.01□□□□□ -0.97
IFT20-207ENST00000578547 F6UB75 175 aa9.01□□□□□ -0.97
IFT20-207ENST00000578547 PAGE4O60829 102 aa9.01□□□□□ -0.97
IFT20-207ENST00000578547 DEFA6Q01524 100 aa9.01□□□□□ -0.97
IFT20-207ENST00000578547 IFITM2Q01629 132 aa9.01□□□□□ -0.97
IFT20-207ENST00000578547 ACTL10Q5JWF8 245 aa9.01□□□□□ -0.97
IFT20-207ENST00000578547 CST9LP1Q5W188 147 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms