RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 CCDC140Q96MF4 163 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 PSMG3-AS1Q96PY0 264 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 HIST1H2BNQ99877 126 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 HIST1H2BMQ99879 126 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 MLST8Q9BVC4 326 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 GFRA4Q9GZZ7 299 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 RNASE7Q9H1E1 156 aaKnown RBP8.63□□□□□ -1.03
SKA2-204ENST00000578519 PRDM13Q9H4Q3 707 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 ZFAND3Q9H8U3 227 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 PSG8Q9UQ74 426 aa8.63□□□□□ -1.03
SKA2-204ENST00000578519 H3BTX0 84 aa8.62□□□□□ -1.03
SKA2-204ENST00000578519 BUB3O43684 328 aa8.62□□□□□ -1.03
SKA2-204ENST00000578519 IGLV1-40P01703 118 aa8.62□□□□□ -1.03
SKA2-204ENST00000578519 IGHV4-59P01825 116 aa8.62□□□□□ -1.03
SKA2-204ENST00000578519 HLA-DQA1P01909 254 aa8.62□□□□□ -1.03
SKA2-204ENST00000578519 SNRPCP09234 159 aaKnown RBP8.62□□□□□ -1.03
SKA2-204ENST00000578519 BLCAPP62952 87 aa8.62□□□□□ -1.03
SKA2-204ENST00000578519 PRR27Q6MZM9 219 aa8.62□□□□□ -1.03
SKA2-204ENST00000578519 ATP5L2Q7Z4Y8 100 aa8.62□□□□□ -1.03
SKA2-204ENST00000578519 Q86TA4 180 aa8.62□□□□□ -1.03
SKA2-204ENST00000578519 RPP21Q9H633 154 aaKnown RBP8.62□□□□□ -1.03
SKA2-204ENST00000578519 RBAKDNA6NC62 111 aa8.61□□□□□ -1.03
SKA2-204ENST00000578519 IGHG4P01861 327 aa8.61□□□□□ -1.03
SKA2-204ENST00000578519 ELANEP08246 267 aa8.61□□□□□ -1.03
SKA2-204ENST00000578519 CIARTQ8N365 385 aaPredicted RBP8.61□□□□□ -1.03
SKA2-204ENST00000578519 OR4X2Q8NGF9 303 aa8.61□□□□□ -1.03
SKA2-204ENST00000578519 BORCS7Q96B45 105 aa8.61□□□□□ -1.03
SKA2-204ENST00000578519 FOXC2Q99958 501 aa8.61□□□□□ -1.03
SKA2-204ENST00000578519 PEF1Q9UBV8 284 aaKnown RBP8.61□□□□□ -1.03
SKA2-204ENST00000578519 LINC00527Q9UJ94 153 aa8.61□□□□□ -1.03
SKA2-204ENST00000578519 U3KQE9 123 aa8.61□□□□□ -1.03
SKA2-204ENST00000578519 PLXNB1O43157 2135 aa8.6□□□□□ -1.03
SKA2-204ENST00000578519 K7EMT4 169 aa8.6□□□□□ -1.03
SKA2-204ENST00000578519 RPS20P60866 119 aaKnown RBP8.6□□□□□ -1.03
SKA2-204ENST00000578519 RPL15P61313 204 aaKnown RBP8.6□□□□□ -1.03
SKA2-204ENST00000578519 Q6AWC8 147 aa8.6□□□□□ -1.03
SKA2-204ENST00000578519 C16orf54Q6UWD8 224 aa8.6□□□□□ -1.03
SKA2-204ENST00000578519 BCL6BQ8N143 479 aaPredicted RBP8.6□□□□□ -1.03
SKA2-204ENST00000578519 NHLRC2Q8NBF2 726 aa8.6□□□□□ -1.03
SKA2-204ENST00000578519 MAPK1IP1LQ8NDC0 245 aa8.6□□□□□ -1.03
SKA2-204ENST00000578519 C17orf77Q96MU5 243 aa8.6□□□□□ -1.03
SKA2-204ENST00000578519 NOL4LQ96MY1 436 aaPredicted RBP8.6□□□□□ -1.03
SKA2-204ENST00000578519 UFC1Q9Y3C8 167 aa8.6□□□□□ -1.03
SKA2-204ENST00000578519 IGHV3-35A0A0C4DH35 117 aa8.59□□□□□ -1.03
SKA2-204ENST00000578519 A0A1B0GW15 77 aa8.59□□□□□ -1.03
SKA2-204ENST00000578519 C19orf71A6NCJ1 209 aa8.59□□□□□ -1.03
SKA2-204ENST00000578519 SNURFLB1AK76 121 aa8.59□□□□□ -1.03
SKA2-204ENST00000578519 RAB4BP61018 213 aa8.59□□□□□ -1.03
SKA2-204ENST00000578519 CFHR3Q02985 330 aa8.59□□□□□ -1.03
SKA2-204ENST00000578519 FOXE3Q13461 319 aa8.59□□□□□ -1.03
SKA2-204ENST00000578519 COA6Q5JTJ3 125 aaKnown RBP8.59□□□□□ -1.03
SKA2-204ENST00000578519 FAM162BQ5T6X4 162 aa8.59□□□□□ -1.03
SKA2-204ENST00000578519 LCN12Q6JVE5 192 aa8.59□□□□□ -1.03
SKA2-204ENST00000578519 WIPF2Q8TF74 440 aaPredicted RBP8.59□□□□□ -1.03
SKA2-204ENST00000578519 MRPL18Q9H0U6 180 aaKnown RBP8.59□□□□□ -1.03
SKA2-204ENST00000578519 NAV3Q8IVL0 2385 aa8.58□□□□□ -1.04
SKA2-204ENST00000578519 WNK2Q9Y3S1 2297 aa8.58□□□□□ -1.04
SKA2-204ENST00000578519 CHEK1O14757 476 aa8.58□□□□□ -1.04
SKA2-204ENST00000578519 SMIM6P0DI80 62 aa8.58□□□□□ -1.04
SKA2-204ENST00000578519 RBPMS2Q6ZRY4 209 aaKnown RBP8.58□□□□□ -1.04
SKA2-204ENST00000578519 COX8CQ7Z4L0 72 aa8.58□□□□□ -1.04
SKA2-204ENST00000578519 GPHB5Q86YW7 130 aa8.58□□□□□ -1.04
SKA2-204ENST00000578519 LINC00518Q8N0U6 118 aa8.58□□□□□ -1.04
SKA2-204ENST00000578519 C16orf92Q96LL3 132 aa8.58□□□□□ -1.04
SKA2-204ENST00000578519 SMAD5-AS1Q9Y6J3 95 aa8.58□□□□□ -1.04
SKA2-204ENST00000578519 ADGRG4Q8IZF6 3080 aa8.57□□□□□ -1.04
SKA2-204ENST00000578519 CLPSL1A2RUU4 121 aa8.57□□□□□ -1.04
SKA2-204ENST00000578519 NPIPB6E9PJ23 425 aa8.57□□□□□ -1.04
SKA2-204ENST00000578519 PHOX2AO14813 284 aa8.57□□□□□ -1.04
SKA2-204ENST00000578519 HOXA3O43365 443 aaPredicted RBP8.57□□□□□ -1.04
SKA2-204ENST00000578519 CRISP2P16562 243 aa8.57□□□□□ -1.04
SKA2-204ENST00000578519 PSMB8P28062 276 aa8.57□□□□□ -1.04
SKA2-204ENST00000578519 TCL1AP56279 114 aa8.57□□□□□ -1.04
SKA2-204ENST00000578519 RIGQ13278 110 aa8.57□□□□□ -1.04
SKA2-204ENST00000578519 SMUG1Q53HV7 270 aa8.57□□□□□ -1.04
SKA2-204ENST00000578519 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.57□□□□□ -1.04
SKA2-204ENST00000578519 OR2D3Q8NGH3 330 aa8.57□□□□□ -1.04
SKA2-204ENST00000578519 TMEM18Q96B42 140 aa8.57□□□□□ -1.04
SKA2-204ENST00000578519 SGK494Q96LW2 274 aa8.57□□□□□ -1.04
SKA2-204ENST00000578519 HIGD1CA8MV81 97 aa8.56□□□□□ -1.04
SKA2-204ENST00000578519 OVOL1O14753 267 aa8.56□□□□□ -1.04
SKA2-204ENST00000578519 IGLV2-11P01706 119 aa8.56□□□□□ -1.04
SKA2-204ENST00000578519 IGHV3-11P01762 117 aa8.56□□□□□ -1.04
SKA2-204ENST00000578519 APCSP02743 223 aa8.56□□□□□ -1.04
SKA2-204ENST00000578519 ID1P41134 155 aa8.56□□□□□ -1.04
SKA2-204ENST00000578519 SRSF2Q01130 221 aaKnown RBP8.56□□□□□ -1.04
SKA2-204ENST00000578519 TMEM78Q5T7P6 136 aa8.56□□□□□ -1.04
SKA2-204ENST00000578519 NUP35Q8NFH5 326 aa8.56□□□□□ -1.04
SKA2-204ENST00000578519 NEU1Q99519 415 aa8.56□□□□□ -1.04
SKA2-204ENST00000578519 ASCL2Q99929 193 aa8.56□□□□□ -1.04
SKA2-204ENST00000578519 DAZ1Q9NQZ3 744 aaKnown RBP8.56□□□□□ -1.04
SKA2-204ENST00000578519 LENEPQ9Y5L5 61 aa8.56□□□□□ -1.04
SKA2-204ENST00000578519 ITPR1Q14643 2758 aa8.55□□□□□ -1.04
SKA2-204ENST00000578519 TRAV8-1A0A0A6YYK1 113 aa8.55□□□□□ -1.04
SKA2-204ENST00000578519 IGHV7-4-1A0A0J9YVY3 117 aa8.55□□□□□ -1.04
SKA2-204ENST00000578519 TMEM189A5PLL7 270 aa8.55□□□□□ -1.04
SKA2-204ENST00000578519 FABP5P3A8MUU1 101 aa8.55□□□□□ -1.04
SKA2-204ENST00000578519 M0QZ24 198 aa8.55□□□□□ -1.04
SKA2-204ENST00000578519 M0R3E3 92 aa8.55□□□□□ -1.04
SKA2-204ENST00000578519 CD5LO43866 347 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms