RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 A0A1W2PPV4 95 aa9.45□□□□□ -0.9
MKS1-206ENST00000577824 HIST1H1EP10412 219 aaKnown RBP9.45□□□□□ -0.9
MKS1-206ENST00000577824 CMC4P56277 68 aaPredicted RBP9.45□□□□□ -0.9
MKS1-206ENST00000577824 FAM122CQ6P4D5 195 aa9.45□□□□□ -0.9
MKS1-206ENST00000577824 SSX7Q7RTT5 188 aa9.45□□□□□ -0.9
MKS1-206ENST00000577824 SUN5Q8TC36 379 aa9.45□□□□□ -0.9
MKS1-206ENST00000577824 TMED6Q8WW62 240 aa9.45□□□□□ -0.9
MKS1-206ENST00000577824 RAB24Q969Q5 203 aa9.45□□□□□ -0.9
MKS1-206ENST00000577824 FXYD5Q96DB9 178 aa9.45□□□□□ -0.9
MKS1-206ENST00000577824 SLC50A1Q9BRV3 221 aa9.45□□□□□ -0.9
MKS1-206ENST00000577824 OR51M1Q9H341 326 aa9.45□□□□□ -0.9
MKS1-206ENST00000577824 ZNF331Q9NQX6 463 aaPredicted RBP9.45□□□□□ -0.9
MKS1-206ENST00000577824 SORL1Q92673 2214 aa9.44□□□□□ -0.9
MKS1-206ENST00000577824 TRAV8-2A0A0B4J237 113 aa9.44□□□□□ -0.9
MKS1-206ENST00000577824 CTXND1A0A1B0GTU2 59 aa9.44□□□□□ -0.9
MKS1-206ENST00000577824 H3BQ15 152 aa9.44□□□□□ -0.9
MKS1-206ENST00000577824 K7EIL1 84 aa9.44□□□□□ -0.9
MKS1-206ENST00000577824 SLC17A3O00476 420 aa9.44□□□□□ -0.9
MKS1-206ENST00000577824 OR7C2O60412 319 aa9.44□□□□□ -0.9
MKS1-206ENST00000577824 PYYP10082 97 aa9.44□□□□□ -0.9
MKS1-206ENST00000577824 TFPI2P48307 235 aa9.44□□□□□ -0.9
MKS1-206ENST00000577824 RAB5CP51148 216 aa9.44□□□□□ -0.9
MKS1-206ENST00000577824 SNRPD3P62318 126 aaKnown RBP9.44□□□□□ -0.9
MKS1-206ENST00000577824 PAXXQ9BUH6 204 aa9.44□□□□□ -0.9
MKS1-206ENST00000577824 ACTR3CQ9C0K3 210 aaPredicted RBP9.44□□□□□ -0.9
MKS1-206ENST00000577824 ZNF586Q9NXT0 402 aa9.44□□□□□ -0.9
MKS1-206ENST00000577824 OR11H12B2RN74 326 aa9.43□□□□□ -0.9
MKS1-206ENST00000577824 SULT1A2P50226 295 aa9.43□□□□□ -0.9
MKS1-206ENST00000577824 UBE2L3P68036 154 aaKnown RBP9.43□□□□□ -0.9
MKS1-206ENST00000577824 CLEC5AQ9NY25 188 aa9.43□□□□□ -0.9
MKS1-206ENST00000577824 NDUFB4O95168 129 aa9.42□□□□□ -0.9
MKS1-206ENST00000577824 NBEAP1P0C6P0 100 aa9.42□□□□□ -0.9
MKS1-206ENST00000577824 ZNF688P0C7X2 276 aa9.42□□□□□ -0.9
MKS1-206ENST00000577824 ARL14EPLP0DKL9 152 aa9.42□□□□□ -0.9
MKS1-206ENST00000577824 ID1P41134 155 aa9.42□□□□□ -0.9
MKS1-206ENST00000577824 WFDC3Q8IUB2 231 aa9.42□□□□□ -0.9
MKS1-206ENST00000577824 LYPD1Q8N2G4 141 aa9.42□□□□□ -0.9
MKS1-206ENST00000577824 RNF141Q8WVD5 230 aa9.42□□□□□ -0.9
MKS1-206ENST00000577824 C16orf92Q96LL3 132 aa9.42□□□□□ -0.9
MKS1-206ENST00000577824 CITED4Q96RK1 184 aa9.42□□□□□ -0.9
MKS1-206ENST00000577824 WFDC10AQ9H1F0 79 aa9.42□□□□□ -0.9
MKS1-206ENST00000577824 CXorf1O96002 111 aa9.41□□□□□ -0.9
MKS1-206ENST00000577824 PRB2P02812 416 aaPredicted RBP9.41□□□□□ -0.9
MKS1-206ENST00000577824 OR10J4P0C629 311 aa9.41□□□□□ -0.9
MKS1-206ENST00000577824 IGHV4-30-4P0DP06 118 aa9.41□□□□□ -0.9
MKS1-206ENST00000577824 FHITP49789 147 aa9.41□□□□□ -0.9
MKS1-206ENST00000577824 DEFB131AP59861 70 aa9.41□□□□□ -0.9
MKS1-206ENST00000577824 PSMG4Q5JS54 123 aa9.41□□□□□ -0.9
MKS1-206ENST00000577824 LCE2DQ5TA82 110 aaPredicted RBP9.41□□□□□ -0.9
MKS1-206ENST00000577824 LINC00322Q6ZN03 302 aaPredicted RBP9.41□□□□□ -0.9
MKS1-206ENST00000577824 MBD3L1Q8WWY6 194 aa9.41□□□□□ -0.9
MKS1-206ENST00000577824 MRPL53Q96EL3 112 aaKnown RBP9.41□□□□□ -0.9
MKS1-206ENST00000577824 UBQLN2Q9UHD9 624 aa9.41□□□□□ -0.9
MKS1-206ENST00000577824 DNAH9Q9NYC9 4486 aa9.41□□□□□ -0.9
MKS1-206ENST00000577824 MAP1LC3B2A6NCE7 125 aa9.4□□□□□ -0.9
MKS1-206ENST00000577824 EIF3GO75821 320 aaKnown RBP eCLIP9.4□□□□□ -0.9
MKS1-206ENST00000577824 GCHFRP30047 84 aa9.4□□□□□ -0.9
MKS1-206ENST00000577824 PSG9Q00887 426 aa9.4□□□□□ -0.9
MKS1-206ENST00000577824 DEFA6Q01524 100 aa9.4□□□□□ -0.9
MKS1-206ENST00000577824 DEFB125Q8N687 156 aa9.4□□□□□ -0.9
MKS1-206ENST00000577824 FAM213BQ8TBF2 198 aa9.4□□□□□ -0.9
MKS1-206ENST00000577824 C20orf173Q96LM9 149 aa9.4□□□□□ -0.9
MKS1-206ENST00000577824 MAP1LC3BQ9GZQ8 125 aa9.4□□□□□ -0.9
MKS1-206ENST00000577824 TMEM167BQ9NRX6 74 aa9.4□□□□□ -0.9
MKS1-206ENST00000577824 TRAV1-1A0A0B4J248 108 aa9.39□□□□□ -0.91
MKS1-206ENST00000577824 A8MTW9 85 aa9.39□□□□□ -0.91
MKS1-206ENST00000577824 H3BTX0 84 aa9.39□□□□□ -0.91
MKS1-206ENST00000577824 HMGB3O15347 200 aaKnown RBP9.39□□□□□ -0.91
MKS1-206ENST00000577824 HLA-DRB4P13762 266 aa9.39□□□□□ -0.91
MKS1-206ENST00000577824 PSG3Q16557 428 aa9.39□□□□□ -0.91
MKS1-206ENST00000577824 FOXI2Q6ZQN5 318 aa9.39□□□□□ -0.91
MKS1-206ENST00000577824 APRG1Q8IVJ8 170 aa9.39□□□□□ -0.91
MKS1-206ENST00000577824 RNF182Q8N6D2 247 aa9.39□□□□□ -0.91
MKS1-206ENST00000577824 CLUHP3Q96NS8 147 aa9.39□□□□□ -0.91
MKS1-206ENST00000577824 SAV1Q9H4B6 383 aaPredicted RBP9.39□□□□□ -0.91
MKS1-206ENST00000577824 SRD5A3Q9H8P0 318 aa9.39□□□□□ -0.91
MKS1-206ENST00000577824 PRELID1Q9Y255 219 aa9.39□□□□□ -0.91
MKS1-206ENST00000577824 ARL2-SNX15V9GYD0 113 aa9.39□□□□□ -0.91
MKS1-206ENST00000577824 HLA-DRB4X5D2U9 266 aa9.39□□□□□ -0.91
MKS1-206ENST00000577824 A0A0J9YX75 114 aa9.38□□□□□ -0.91
MKS1-206ENST00000577824 SNRPCP09234 159 aaKnown RBP9.38□□□□□ -0.91
MKS1-206ENST00000577824 HLA-DMBP28068 263 aa9.38□□□□□ -0.91
MKS1-206ENST00000577824 ZNF124Q15973 351 aa9.38□□□□□ -0.91
MKS1-206ENST00000577824 FAM74A1Q5RGS3 127 aa9.38□□□□□ -0.91
MKS1-206ENST00000577824 ALKAL2Q6UX46 152 aa9.38□□□□□ -0.91
MKS1-206ENST00000577824 TRPT1Q86TN4 253 aaKnown RBP9.38□□□□□ -0.91
MKS1-206ENST00000577824 ARL6IP6Q8N6S5 226 aa9.38□□□□□ -0.91
MKS1-206ENST00000577824 LRRC20Q8TCA0 184 aa9.38□□□□□ -0.91
MKS1-206ENST00000577824 BLNKQ8WV28 456 aa9.38□□□□□ -0.91
MKS1-206ENST00000577824 H2AFB1P0C5Y9 115 aa9.37□□□□□ -0.91
MKS1-206ENST00000577824 IGFL4Q6B9Z1 124 aa9.37□□□□□ -0.91
MKS1-206ENST00000577824 TEX261Q6UWH6 196 aa9.37□□□□□ -0.91
MKS1-206ENST00000577824 MRAPQ8TCY5 172 aa9.37□□□□□ -0.91
MKS1-206ENST00000577824 LINC00052Q96N35 136 aa9.37□□□□□ -0.91
MKS1-206ENST00000577824 Q9H3A6 140 aa9.37□□□□□ -0.91
MKS1-206ENST00000577824 AAMDCQ9H7C9 122 aa9.37□□□□□ -0.91
MKS1-206ENST00000577824 A0A1W2PRE2 83 aa9.36□□□□□ -0.91
MKS1-206ENST00000577824 RBMY1BA6NDE4 496 aaKnown RBP9.36□□□□□ -0.91
MKS1-206ENST00000577824 RBMY1EA6NEQ0 496 aaKnown RBP9.36□□□□□ -0.91
MKS1-206ENST00000577824 H3BMM0 161 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms