RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 PRAF2O60831 178 aa9.38□□□□□ -0.91
PPP4R1-206ENST00000577779 IGHV3-53P01767 116 aa9.38□□□□□ -0.91
PPP4R1-206ENST00000577779 SULT1A3P0DMM9 295 aa9.38□□□□□ -0.91
PPP4R1-206ENST00000577779 SULT1A4P0DMN0 295 aa9.38□□□□□ -0.91
PPP4R1-206ENST00000577779 ASIPP42127 132 aa9.38□□□□□ -0.91
PPP4R1-206ENST00000577779 TMEM268Q5VZI3 342 aa9.38□□□□□ -0.91
PPP4R1-206ENST00000577779 THAP8Q8NA92 274 aa9.38□□□□□ -0.91
PPP4R1-206ENST00000577779 BPIFCQ8NFQ6 507 aa9.38□□□□□ -0.91
PPP4R1-206ENST00000577779 OR13C8Q8NGS7 320 aa9.38□□□□□ -0.91
PPP4R1-206ENST00000577779 GLYATL2Q8WU03 294 aa9.38□□□□□ -0.91
PPP4R1-206ENST00000577779 GSN-AS1Q9NRJ2 163 aa9.38□□□□□ -0.91
PPP4R1-206ENST00000577779 RCL1Q9Y2P8 373 aaKnown RBP9.38□□□□□ -0.91
PPP4R1-206ENST00000577779 TRAV12-3A0A0B4J271 114 aa9.37□□□□□ -0.91
PPP4R1-206ENST00000577779 J3KRW8 73 aa9.37□□□□□ -0.91
PPP4R1-206ENST00000577779 RPL7P18124 248 aaKnown RBP9.37□□□□□ -0.91
PPP4R1-206ENST00000577779 GATA2P23769 480 aaPredicted RBP9.37□□□□□ -0.91
PPP4R1-206ENST00000577779 CRYBA4P53673 196 aa9.37□□□□□ -0.91
PPP4R1-206ENST00000577779 ATP5IP56385 69 aaPredicted RBP9.37□□□□□ -0.91
PPP4R1-206ENST00000577779 SLAQ13239 276 aa9.37□□□□□ -0.91
PPP4R1-206ENST00000577779 RNASE10Q5GAN6 216 aaKnown RBP9.37□□□□□ -0.91
PPP4R1-206ENST00000577779 GPR107Q5VW38 600 aa9.37□□□□□ -0.91
PPP4R1-206ENST00000577779 STEAP1BQ6NZ63 245 aa9.37□□□□□ -0.91
PPP4R1-206ENST00000577779 SNX29P2Q8IUI4 249 aa9.37□□□□□ -0.91
PPP4R1-206ENST00000577779 ST6GAL2Q96JF0 529 aa9.37□□□□□ -0.91
PPP4R1-206ENST00000577779 C8orf49Q96NF6 230 aa9.37□□□□□ -0.91
PPP4R1-206ENST00000577779 PYGO2Q9BRQ0 406 aa9.37□□□□□ -0.91
PPP4R1-206ENST00000577779 RBKSQ9H477 322 aa9.37□□□□□ -0.91
PPP4R1-206ENST00000577779 Q9HAA7 133 aa9.37□□□□□ -0.91
PPP4R1-206ENST00000577779 HHLA3Q9XRX5 114 aa9.37□□□□□ -0.91
PPP4R1-206ENST00000577779 TEX13DA0A0J9YY54 714 aaPredicted RBP9.36□□□□□ -0.91
PPP4R1-206ENST00000577779 TNFAIP8O95379 198 aa9.36□□□□□ -0.91
PPP4R1-206ENST00000577779 SRIP30626 198 aa9.36□□□□□ -0.91
PPP4R1-206ENST00000577779 CROCCP3Q8IVE0 287 aa9.36□□□□□ -0.91
PPP4R1-206ENST00000577779 ZNF680Q8NEM1 530 aa9.36□□□□□ -0.91
PPP4R1-206ENST00000577779 HSPB7Q9UBY9 170 aa9.36□□□□□ -0.91
PPP4R1-206ENST00000577779 H3BRN7 92 aa9.35□□□□□ -0.91
PPP4R1-206ENST00000577779 ZNF415Q09FC8 603 aa9.35□□□□□ -0.91
PPP4R1-206ENST00000577779 TMEM182Q6ZP80 229 aaPredicted RBP9.35□□□□□ -0.91
PPP4R1-206ENST00000577779 C11orf72Q8NBR9 251 aa9.35□□□□□ -0.91
PPP4R1-206ENST00000577779 MARCH1Q8TCQ1 289 aa9.35□□□□□ -0.91
PPP4R1-206ENST00000577779 CNBD2Q96M20 576 aa9.35□□□□□ -0.91
PPP4R1-206ENST00000577779 CHAC1Q9BUX1 264 aa9.35□□□□□ -0.91
PPP4R1-206ENST00000577779 A0A087X0K7 114 aa9.34□□□□□ -0.91
PPP4R1-206ENST00000577779 SMIM31A0A1B0GVY4 71 aa9.34□□□□□ -0.91
PPP4R1-206ENST00000577779 E5RGE8 158 aa9.34□□□□□ -0.91
PPP4R1-206ENST00000577779 K7EQD1 137 aa9.34□□□□□ -0.91
PPP4R1-206ENST00000577779 SPINK4O60575 86 aa9.34□□□□□ -0.91
PPP4R1-206ENST00000577779 CD3DP04234 171 aa9.34□□□□□ -0.91
PPP4R1-206ENST00000577779 MT1HL1P0DM35 61 aa9.34□□□□□ -0.91
PPP4R1-206ENST00000577779 SCGB2B2Q4G0G5 96 aa9.34□□□□□ -0.91
PPP4R1-206ENST00000577779 OR1S1Q8NH92 325 aa9.34□□□□□ -0.91
PPP4R1-206ENST00000577779 TERB2Q8NHR7 220 aa9.34□□□□□ -0.91
PPP4R1-206ENST00000577779 SHANK2-AS3Q9BTD1 123 aa9.34□□□□□ -0.91
PPP4R1-206ENST00000577779 NAA60Q9H7X0 242 aa9.34□□□□□ -0.91
PPP4R1-206ENST00000577779 PAIP2BQ9ULR5 123 aaKnown RBP9.34□□□□□ -0.91
PPP4R1-206ENST00000577779 IBA57-AS1B1ANH7 110 aa9.33□□□□□ -0.92
PPP4R1-206ENST00000577779 LEPP41159 167 aa9.33□□□□□ -0.92
PPP4R1-206ENST00000577779 GABARAPL2P60520 117 aa9.33□□□□□ -0.92
PPP4R1-206ENST00000577779 RAP2BP61225 183 aa9.33□□□□□ -0.92
PPP4R1-206ENST00000577779 RAB11AP62491 216 aa9.33□□□□□ -0.92
PPP4R1-206ENST00000577779 FHL2Q14192 279 aa9.33□□□□□ -0.92
PPP4R1-206ENST00000577779 LINC01620Q4KN68 170 aa9.33□□□□□ -0.92
PPP4R1-206ENST00000577779 PCNPQ8WW12 178 aaKnown RBP9.33□□□□□ -0.92
PPP4R1-206ENST00000577779 C14orf166Q9Y224 244 aaKnown RBP9.33□□□□□ -0.92
PPP4R1-206ENST00000577779 HIGD1AQ9Y241 93 aa9.33□□□□□ -0.92
PPP4R1-206ENST00000577779 KLF12Q9Y4X4 402 aa9.33□□□□□ -0.92
PPP4R1-206ENST00000577779 GYPEP15421 78 aa9.32□□□□□ -0.92
PPP4R1-206ENST00000577779 WFDC2Q14508 124 aa9.32□□□□□ -0.92
PPP4R1-206ENST00000577779 CIRBP-AS1Q8TBR5 109 aa9.32□□□□□ -0.92
PPP4R1-206ENST00000577779 ZNF431Q8TF32 576 aaPredicted RBP9.32□□□□□ -0.92
PPP4R1-206ENST00000577779 NRG4Q8WWG1 115 aa9.32□□□□□ -0.92
PPP4R1-206ENST00000577779 VGLL1Q99990 258 aa9.32□□□□□ -0.92
PPP4R1-206ENST00000577779 MRPL32Q9BYC8 188 aaKnown RBP9.32□□□□□ -0.92
PPP4R1-206ENST00000577779 DNAJC4Q9NNZ3 241 aa9.32□□□□□ -0.92
PPP4R1-206ENST00000577779 MRPL16Q9NX20 251 aaKnown RBP9.32□□□□□ -0.92
PPP4R1-206ENST00000577779 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.31□□□□□ -0.92
PPP4R1-206ENST00000577779 IGHV3-38A0A0C4DH36 116 aa9.31□□□□□ -0.92
PPP4R1-206ENST00000577779 CRYM-AS1A6NIL9 109 aa9.31□□□□□ -0.92
PPP4R1-206ENST00000577779 PRAC2D3DTV9 90 aa9.31□□□□□ -0.92
PPP4R1-206ENST00000577779 CCR6P51684 374 aa9.31□□□□□ -0.92
PPP4R1-206ENST00000577779 RPL37AP61513 92 aaKnown RBP9.31□□□□□ -0.92
PPP4R1-206ENST00000577779 SMCO1Q147U7 214 aa9.31□□□□□ -0.92
PPP4R1-206ENST00000577779 ACOT6Q3I5F7 207 aaPredicted RBP9.31□□□□□ -0.92
PPP4R1-206ENST00000577779 ZBTB8BQ8NAP8 495 aaPredicted RBP9.31□□□□□ -0.92
PPP4R1-206ENST00000577779 OR4D10Q8NGI6 311 aa9.31□□□□□ -0.92
PPP4R1-206ENST00000577779 RTBDNQ9BSG5 229 aaPredicted RBP9.31□□□□□ -0.92
PPP4R1-206ENST00000577779 TRGV4A0A0C4DH28 118 aa9.3□□□□□ -0.92
PPP4R1-206ENST00000577779 LINC00854A0A1B0GVQ3 168 aa9.3□□□□□ -0.92
PPP4R1-206ENST00000577779 HYPMO75409 117 aa9.3□□□□□ -0.92
PPP4R1-206ENST00000577779 IGLV2-8P01709 118 aa9.3□□□□□ -0.92
PPP4R1-206ENST00000577779 CT45A10P0DMU9 189 aa9.3□□□□□ -0.92
PPP4R1-206ENST00000577779 TBPP20226 339 aa9.3□□□□□ -0.92
PPP4R1-206ENST00000577779 TGFBR1P36897 503 aa9.3□□□□□ -0.92
PPP4R1-206ENST00000577779 HNRNPA3P51991 378 aaKnown RBP9.3□□□□□ -0.92
PPP4R1-206ENST00000577779 TCL1AP56279 114 aa9.3□□□□□ -0.92
PPP4R1-206ENST00000577779 ASAH1Q13510 395 aa9.3□□□□□ -0.92
PPP4R1-206ENST00000577779 LINC01556Q5JQF7 62 aa9.3□□□□□ -0.92
PPP4R1-206ENST00000577779 TEPPQ6URK8 271 aa9.3□□□□□ -0.92
PPP4R1-206ENST00000577779 EIF4E3Q8N5X7 224 aaKnown RBP9.3□□□□□ -0.92
PPP4R1-206ENST00000577779 TXNDC17Q9BRA2 123 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms