RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 DEFB131AP59861 70 aa6.37□□□□□ -1.39
NUP88-211ENST00000575976 ZNF124Q15973 351 aa6.37□□□□□ -1.39
NUP88-211ENST00000575976 AKR1C8PQ5T2L2 129 aa6.37□□□□□ -1.39
NUP88-211ENST00000575976 IGFL4Q6B9Z1 124 aa6.37□□□□□ -1.39
NUP88-211ENST00000575976 SLC51BQ86UW2 128 aa6.37□□□□□ -1.39
NUP88-211ENST00000575976 APRG1Q8IVJ8 170 aa6.37□□□□□ -1.39
NUP88-211ENST00000575976 DEFB125Q8N687 156 aa6.37□□□□□ -1.39
NUP88-211ENST00000575976 ZNF503Q96F45 646 aa6.37□□□□□ -1.39
NUP88-211ENST00000575976 FAM210AQ96ND0 272 aa6.37□□□□□ -1.39
NUP88-211ENST00000575976 KRTAP17-1Q9BYP8 105 aa6.37□□□□□ -1.39
NUP88-211ENST00000575976 ACTR3CQ9C0K3 210 aaPredicted RBP6.37□□□□□ -1.39
NUP88-211ENST00000575976 OR51M1Q9H341 326 aa6.37□□□□□ -1.39
NUP88-211ENST00000575976 ZNF586Q9NXT0 402 aa6.37□□□□□ -1.39
NUP88-211ENST00000575976 TMEM14CQ9P0S9 112 aa6.37□□□□□ -1.39
NUP88-211ENST00000575976 TRAV8-2A0A0B4J237 113 aa6.36□□□□□ -1.39
NUP88-211ENST00000575976 OR7C2O60412 319 aa6.36□□□□□ -1.39
NUP88-211ENST00000575976 IGHV4-30-4P0DP06 118 aa6.36□□□□□ -1.39
NUP88-211ENST00000575976 HIST1H1EP10412 219 aaKnown RBP6.36□□□□□ -1.39
NUP88-211ENST00000575976 C4BPBP20851 252 aa6.36□□□□□ -1.39
NUP88-211ENST00000575976 HLA-DMBP28068 263 aa6.36□□□□□ -1.39
NUP88-211ENST00000575976 ID1P41134 155 aa6.36□□□□□ -1.39
NUP88-211ENST00000575976 TAS2R45P59539 299 aa6.36□□□□□ -1.39
NUP88-211ENST00000575976 ZNF726P1Q15940 193 aa6.36□□□□□ -1.39
NUP88-211ENST00000575976 DEFB121Q5J5C9 76 aa6.36□□□□□ -1.39
NUP88-211ENST00000575976 PSMG4Q5JS54 123 aa6.36□□□□□ -1.39
NUP88-211ENST00000575976 SSX7Q7RTT5 188 aa6.36□□□□□ -1.39
NUP88-211ENST00000575976 MRAPQ8TCY5 172 aa6.36□□□□□ -1.39
NUP88-211ENST00000575976 RNF141Q8WVD5 230 aa6.36□□□□□ -1.39
NUP88-211ENST00000575976 TMED6Q8WW62 240 aa6.36□□□□□ -1.39
NUP88-211ENST00000575976 RAB24Q969Q5 203 aa6.36□□□□□ -1.39
NUP88-211ENST00000575976 FXYD5Q96DB9 178 aa6.36□□□□□ -1.39
NUP88-211ENST00000575976 SAT2Q96F10 170 aaPredicted RBP6.36□□□□□ -1.39
NUP88-211ENST00000575976 C16orf92Q96LL3 132 aa6.36□□□□□ -1.39
NUP88-211ENST00000575976 LINC00052Q96N35 136 aa6.36□□□□□ -1.39
NUP88-211ENST00000575976 CITED4Q96RK1 184 aa6.36□□□□□ -1.39
NUP88-211ENST00000575976 FAM110AQ9BQ89 295 aa6.36□□□□□ -1.39
NUP88-211ENST00000575976 PAXXQ9BUH6 204 aa6.36□□□□□ -1.39
NUP88-211ENST00000575976 HRH4Q9H3N8 390 aa6.36□□□□□ -1.39
NUP88-211ENST00000575976 TRBV19A0A075B6N1 114 aa6.35□□□□□ -1.39
NUP88-211ENST00000575976 SLC17A3O00476 420 aa6.35□□□□□ -1.39
NUP88-211ENST00000575976 ISLRO14498 428 aa6.35□□□□□ -1.39
NUP88-211ENST00000575976 OR10J4P0C629 311 aa6.35□□□□□ -1.39
NUP88-211ENST00000575976 NBEAP1P0C6P0 100 aa6.35□□□□□ -1.39
NUP88-211ENST00000575976 STAG3L2P0CL84 134 aa6.35□□□□□ -1.39
NUP88-211ENST00000575976 STAG3L3P0CL85 134 aa6.35□□□□□ -1.39
NUP88-211ENST00000575976 PSMB3P49720 205 aa6.35□□□□□ -1.39
NUP88-211ENST00000575976 FHITP49789 147 aa6.35□□□□□ -1.39
NUP88-211ENST00000575976 DEFB1P60022 68 aa6.35□□□□□ -1.39
NUP88-211ENST00000575976 SNRPD3P62318 126 aaKnown RBP6.35□□□□□ -1.39
NUP88-211ENST00000575976 GUK1Q16774 197 aa6.35□□□□□ -1.39
NUP88-211ENST00000575976 KHDC3LQ587J8 217 aa6.35□□□□□ -1.39
NUP88-211ENST00000575976 LCN15Q6UWW0 184 aa6.35□□□□□ -1.39
NUP88-211ENST00000575976 LRRC20Q8TCA0 184 aa6.35□□□□□ -1.39
NUP88-211ENST00000575976 BLNKQ8WV28 456 aa6.35□□□□□ -1.39
NUP88-211ENST00000575976 C20orf173Q96LM9 149 aa6.35□□□□□ -1.39
NUP88-211ENST00000575976 SRD5A3Q9H8P0 318 aa6.35□□□□□ -1.39
NUP88-211ENST00000575976 ZNF331Q9NQX6 463 aaPredicted RBP6.35□□□□□ -1.39
NUP88-211ENST00000575976 SORL1Q92673 2214 aa6.35□□□□□ -1.39
NUP88-211ENST00000575976 CTXND1A0A1B0GTU2 59 aa6.34□□□□□ -1.39
NUP88-211ENST00000575976 KNCNA6PVL3 124 aa6.34□□□□□ -1.39
NUP88-211ENST00000575976 A8MZ25 164 aa6.34□□□□□ -1.39
NUP88-211ENST00000575976 UMAD1C9J7I0 102 aa6.34□□□□□ -1.39
NUP88-211ENST00000575976 ZNF253O75346 499 aa6.34□□□□□ -1.39
NUP88-211ENST00000575976 NDUFB4O95168 129 aa6.34□□□□□ -1.39
NUP88-211ENST00000575976 ARL14EPLP0DKL9 152 aa6.34□□□□□ -1.39
NUP88-211ENST00000575976 UBE2L3P68036 154 aaKnown RBP6.34□□□□□ -1.39
NUP88-211ENST00000575976 SAMD13Q5VXD3 122 aa6.34□□□□□ -1.39
NUP88-211ENST00000575976 EIF5AL1Q6IS14 154 aaKnown RBP6.34□□□□□ -1.39
NUP88-211ENST00000575976 PQLC2Q6ZP29 291 aa6.34□□□□□ -1.39
NUP88-211ENST00000575976 RNF182Q8N6D2 247 aa6.34□□□□□ -1.39
NUP88-211ENST00000575976 ARL6IP6Q8N6S5 226 aa6.34□□□□□ -1.39
NUP88-211ENST00000575976 FAM213BQ8TBF2 198 aa6.34□□□□□ -1.39
NUP88-211ENST00000575976 SLC50A1Q9BRV3 221 aa6.34□□□□□ -1.39
NUP88-211ENST00000575976 TUBA4BQ9H853 241 aa6.34□□□□□ -1.39
NUP88-211ENST00000575976 RBMY1BA6NDE4 496 aaKnown RBP6.33□□□□□ -1.4
NUP88-211ENST00000575976 RBMY1EA6NEQ0 496 aaKnown RBP6.33□□□□□ -1.4
NUP88-211ENST00000575976 F6UB75 175 aa6.33□□□□□ -1.4
NUP88-211ENST00000575976 CXorf1O96002 111 aa6.33□□□□□ -1.4
NUP88-211ENST00000575976 RBMY1DP0C7P1 496 aaKnown RBP6.33□□□□□ -1.4
NUP88-211ENST00000575976 FRMD6-AS1P0C7T7 363 aa6.33□□□□□ -1.4
NUP88-211ENST00000575976 PRB4P10163 310 aaPredicted RBP6.33□□□□□ -1.4
NUP88-211ENST00000575976 GCHFRP30047 84 aa6.33□□□□□ -1.4
NUP88-211ENST00000575976 SULT1A2P50226 295 aa6.33□□□□□ -1.4
NUP88-211ENST00000575976 FGF8P55075 233 aaPredicted RBP6.33□□□□□ -1.4
NUP88-211ENST00000575976 PSG3Q16557 428 aa6.33□□□□□ -1.4
NUP88-211ENST00000575976 GDF5OSQ5U4N7 250 aa6.33□□□□□ -1.4
NUP88-211ENST00000575976 LINC00322Q6ZN03 302 aaPredicted RBP6.33□□□□□ -1.4
NUP88-211ENST00000575976 ZNF738Q8NE65 137 aa6.33□□□□□ -1.4
NUP88-211ENST00000575976 PHYHIPLQ96FC7 376 aa6.33□□□□□ -1.4
NUP88-211ENST00000575976 LOC102724200A0A096LPH7 203 aaPredicted RBP6.32□□□□□ -1.4
NUP88-211ENST00000575976 MAP1LC3B2A6NCE7 125 aa6.32□□□□□ -1.4
NUP88-211ENST00000575976 ZNF705FA8MVS1 300 aaPredicted RBP6.32□□□□□ -1.4
NUP88-211ENST00000575976 RPL35AP18077 110 aaKnown RBP6.32□□□□□ -1.4
NUP88-211ENST00000575976 RANP62826 216 aaKnown RBP6.32□□□□□ -1.4
NUP88-211ENST00000575976 PSG9Q00887 426 aa6.32□□□□□ -1.4
NUP88-211ENST00000575976 PDE6HQ13956 83 aa6.32□□□□□ -1.4
NUP88-211ENST00000575976 ICAM4Q14773 271 aa6.32□□□□□ -1.4
NUP88-211ENST00000575976 ACTL10Q5JWF8 245 aa6.32□□□□□ -1.4
NUP88-211ENST00000575976 FAM74A1Q5RGS3 127 aa6.32□□□□□ -1.4
NUP88-211ENST00000575976 ALKAL2Q6UX46 152 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms