RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, human

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1L1-222	ENST00000575909	TAAR3P	Q9P1P4	343 aa		4.03	□□□□□ -1.76
TOM1L1-222	ENST00000575909	ANAPC10	Q9UM13	185 aa		4.03	□□□□□ -1.76
TOM1L1-222	ENST00000575909	HLA-DRB4	X5D2U9	266 aa		4.03	□□□□□ -1.76
TOM1L1-222	ENST00000575909	WIZ	O95785	1651 aa		4.03	□□□□□ -1.76
TOM1L1-222	ENST00000575909	NUP210	Q8TEM1	1887 aa	Predicted RBP	4.03	□□□□□ -1.77
TOM1L1-222	ENST00000575909	PARP14	Q460N5	1801 aa		4.02	□□□□□ -1.77
TOM1L1-222	ENST00000575909	NUP205	Q92621	2012 aa		4.02	□□□□□ -1.77
TOM1L1-222	ENST00000575909	IGLV4-69	A0A075B6H9	119 aa		4.02	□□□□□ -1.77
TOM1L1-222	ENST00000575909	IGLV1-50	A0A075B6I6	118 aa		4.02	□□□□□ -1.77
TOM1L1-222	ENST00000575909	LOC107986453	A0A1B0GWG9	222 aa		4.02	□□□□□ -1.77
TOM1L1-222	ENST00000575909	UMAD1	C9J7I0	102 aa		4.02	□□□□□ -1.77
TOM1L1-222	ENST00000575909		H3BP45	60 aa		4.02	□□□□□ -1.77
TOM1L1-222	ENST00000575909		H3BT86	120 aa		4.02	□□□□□ -1.77
TOM1L1-222	ENST00000575909	CREBL2	O60519	120 aa	Predicted RBP	4.02	□□□□□ -1.77
TOM1L1-222	ENST00000575909	ZNF688	P0C7X2	276 aa		4.02	□□□□□ -1.77
TOM1L1-222	ENST00000575909	TLX1NB	P0CAT3	122 aa		4.02	□□□□□ -1.77
TOM1L1-222	ENST00000575909	COX7C	P15954	63 aa		4.02	□□□□□ -1.77
TOM1L1-222	ENST00000575909	LSM3	P62310	102 aa	Known RBP	4.02	□□□□□ -1.77
TOM1L1-222	ENST00000575909	ABCA11P	Q4W5N1	156 aa		4.02	□□□□□ -1.77
TOM1L1-222	ENST00000575909	ORMDL2	Q53FV1	153 aa		4.02	□□□□□ -1.77
TOM1L1-222	ENST00000575909	KRTAP5-11	Q6L8G4	156 aa		4.02	□□□□□ -1.77
TOM1L1-222	ENST00000575909	CEMP1	Q6PRD7	247 aa	Predicted RBP	4.02	□□□□□ -1.77
TOM1L1-222	ENST00000575909		Q6ZS49	121 aa		4.02	□□□□□ -1.77
TOM1L1-222	ENST00000575909	WDR86	Q86TI4	376 aa		4.02	□□□□□ -1.77
TOM1L1-222	ENST00000575909	TEN1	Q86WV5	123 aa		4.02	□□□□□ -1.77
TOM1L1-222	ENST00000575909	KRTAP11-1	Q8IUC1	163 aa		4.02	□□□□□ -1.77
TOM1L1-222	ENST00000575909	C15orf56	Q8N910	161 aa		4.02	□□□□□ -1.77
TOM1L1-222	ENST00000575909		Q8N9L7	120 aa		4.02	□□□□□ -1.77
TOM1L1-222	ENST00000575909	BRK1	Q8WUW1	75 aa		4.02	□□□□□ -1.77
TOM1L1-222	ENST00000575909	TOMM6	Q96B49	74 aa		4.02	□□□□□ -1.77
TOM1L1-222	ENST00000575909	PLA2G2F	Q9BZM2	168 aa		4.02	□□□□□ -1.77
TOM1L1-222	ENST00000575909	BCL2L10	Q9HD36	194 aa		4.02	□□□□□ -1.77
TOM1L1-222	ENST00000575909	FANCM	Q8IYD8	2048 aa		4.02	□□□□□ -1.77
TOM1L1-222	ENST00000575909	UBR2	Q8IWV8	1755 aa		4.02	□□□□□ -1.77
TOM1L1-222	ENST00000575909	ADAMTSL1	Q8N6G6	1762 aa		4.02	□□□□□ -1.77
TOM1L1-222	ENST00000575909	GTF3C1	Q12789	2109 aa		4.01	□□□□□ -1.77
TOM1L1-222	ENST00000575909	DSPP	Q9NZW4	1301 aa		4.01	□□□□□ -1.77
TOM1L1-222	ENST00000575909	PXDN	Q92626	1479 aa		4.01	□□□□□ -1.77
TOM1L1-222	ENST00000575909	TRGV5	A0A0B4J1U4	118 aa		4.01	□□□□□ -1.77
TOM1L1-222	ENST00000575909	IGHV5-10-1	A0A0J9YXX1	117 aa		4.01	□□□□□ -1.77
TOM1L1-222	ENST00000575909		A0A1B0GVX0	72 aa		4.01	□□□□□ -1.77
TOM1L1-222	ENST00000575909	PSPHP1	O15172	72 aa		4.01	□□□□□ -1.77
TOM1L1-222	ENST00000575909	GYPB	P06028	91 aa		4.01	□□□□□ -1.77
TOM1L1-222	ENST00000575909	IGHV1-8	P0DP01	117 aa		4.01	□□□□□ -1.77
TOM1L1-222	ENST00000575909	SYNJ2BP	P57105	145 aa		4.01	□□□□□ -1.77
TOM1L1-222	ENST00000575909	SPRN	Q5BIV9	151 aa		4.01	□□□□□ -1.77
TOM1L1-222	ENST00000575909	BPIFA4P	Q86YQ2	179 aa		4.01	□□□□□ -1.77
TOM1L1-222	ENST00000575909	SLC22A24	Q8N4F4	322 aa		4.01	□□□□□ -1.77
TOM1L1-222	ENST00000575909	C11orf72	Q8NBR9	251 aa		4.01	□□□□□ -1.77
TOM1L1-222	ENST00000575909	TVP23C	Q96ET8	276 aa		4.01	□□□□□ -1.77
TOM1L1-222	ENST00000575909	PLEKHF2	Q9H8W4	249 aa		4.01	□□□□□ -1.77
TOM1L1-222	ENST00000575909	COQ4	Q9Y3A0	265 aa		4.01	□□□□□ -1.77
TOM1L1-222	ENST00000575909	TNRC6A	Q8NDV7	1962 aa	Known RBP	4.01	□□□□□ -1.77
TOM1L1-222	ENST00000575909	NFAT5	O94916	1531 aa		4	□□□□□ -1.77
TOM1L1-222	ENST00000575909	COL16A1	Q07092	1604 aa	Predicted RBP	4	□□□□□ -1.77
TOM1L1-222	ENST00000575909	ADCY10	Q96PN6	1610 aa		4	□□□□□ -1.77
TOM1L1-222	ENST00000575909	VWA8	A3KMH1	1905 aa		4	□□□□□ -1.77
TOM1L1-222	ENST00000575909	MYH8	P13535	1937 aa		4	□□□□□ -1.77
TOM1L1-222	ENST00000575909	DENND4C	Q5VZ89	1909 aa		4	□□□□□ -1.77
TOM1L1-222	ENST00000575909	DPRX	A6NFQ7	191 aa		4	□□□□□ -1.77
TOM1L1-222	ENST00000575909	ZNF286B	P0CG31	522 aa		4	□□□□□ -1.77
TOM1L1-222	ENST00000575909	MP68	P56378	58 aa		4	□□□□□ -1.77
TOM1L1-222	ENST00000575909	NPC2	P61916	151 aa		4	□□□□□ -1.77
TOM1L1-222	ENST00000575909	LINC00311	Q8N616	119 aa		4	□□□□□ -1.77
TOM1L1-222	ENST00000575909	OR10G2	Q8NGC3	310 aa		4	□□□□□ -1.77
TOM1L1-222	ENST00000575909	CMTM2	Q8TAZ6	248 aa		4	□□□□□ -1.77
TOM1L1-222	ENST00000575909	MRPL30	Q8TCC3	161 aa	Known RBP	4	□□□□□ -1.77
TOM1L1-222	ENST00000575909	MYOZ3	Q8TDC0	251 aa		4	□□□□□ -1.77
TOM1L1-222	ENST00000575909	PRELID3A	Q96N28	172 aa		4	□□□□□ -1.77
TOM1L1-222	ENST00000575909	TIMM17A	Q99595	171 aa		4	□□□□□ -1.77
TOM1L1-222	ENST00000575909	MGST2	Q99735	147 aa		4	□□□□□ -1.77
TOM1L1-222	ENST00000575909	UNC13B	O14795	1591 aa		4	□□□□□ -1.77
TOM1L1-222	ENST00000575909	DIP2C	Q9Y2E4	1556 aa		4	□□□□□ -1.77
TOM1L1-222	ENST00000575909	DOCK5	Q9H7D0	1870 aa		4	□□□□□ -1.77
TOM1L1-222	ENST00000575909	QRICH2	Q9H0J4	1663 aa		4	□□□□□ -1.77
TOM1L1-222	ENST00000575909	RIMBP3C	A6NJZ7	1639 aa		3.99	□□□□□ -1.77
TOM1L1-222	ENST00000575909	RIMBP3B	A6NNM3	1639 aa		3.99	□□□□□ -1.77
TOM1L1-222	ENST00000575909	RIMBP3	Q9UFD9	1639 aa		3.99	□□□□□ -1.77
TOM1L1-222	ENST00000575909	PEAK1	Q9H792	1746 aa		3.99	□□□□□ -1.77
TOM1L1-222	ENST00000575909	MARF1	Q9Y4F3	1742 aa	Known RBP	3.99	□□□□□ -1.77
TOM1L1-222	ENST00000575909	TRAV19	A0A0A6YYK7	116 aa		3.99	□□□□□ -1.77
TOM1L1-222	ENST00000575909	TRBV27	A0A0K0K1C4	114 aa		3.99	□□□□□ -1.77
TOM1L1-222	ENST00000575909	TRBV7-7	A0A0K0K1E9	115 aa		3.99	□□□□□ -1.77
TOM1L1-222	ENST00000575909	SYS1-DBNDD2	H3BUS1	97 aa		3.99	□□□□□ -1.77
TOM1L1-222	ENST00000575909	CXCL1	P09341	107 aa		3.99	□□□□□ -1.77
TOM1L1-222	ENST00000575909	ATP5E	P56381	51 aa	Predicted RBP	3.99	□□□□□ -1.77
TOM1L1-222	ENST00000575909	ELOC	Q15369	112 aa		3.99	□□□□□ -1.77
TOM1L1-222	ENST00000575909	DEFB116	Q30KQ4	102 aa		3.99	□□□□□ -1.77
TOM1L1-222	ENST00000575909	MPV17L2	Q567V2	206 aa		3.99	□□□□□ -1.77
TOM1L1-222	ENST00000575909	OR5H2	Q8NGV7	314 aa		3.99	□□□□□ -1.77
TOM1L1-222	ENST00000575909	CAMK2N2	Q96S95	79 aa		3.99	□□□□□ -1.77
TOM1L1-222	ENST00000575909	SHANK2-AS3	Q9BTD1	123 aa		3.99	□□□□□ -1.77
TOM1L1-222	ENST00000575909	C11orf68	Q9H3H3	251 aa	Known RBP	3.99	□□□□□ -1.77
TOM1L1-222	ENST00000575909	DNAJC15	Q9Y5T4	150 aa		3.99	□□□□□ -1.77
TOM1L1-222	ENST00000575909	SBF2	Q86WG5	1849 aa		3.99	□□□□□ -1.77
TOM1L1-222	ENST00000575909	ABCC1	P33527	1531 aa		3.99	□□□□□ -1.77
TOM1L1-222	ENST00000575909	TDRD6	O60522	2096 aa	Known RBP	3.99	□□□□□ -1.77
TOM1L1-222	ENST00000575909	MADD	Q8WXG6	1647 aa		3.99	□□□□□ -1.77
TOM1L1-222	ENST00000575909	ANK1	P16157	1881 aa		3.98	□□□□□ -1.77
TOM1L1-222	ENST00000575909	IFT172	Q9UG01	1749 aa		3.98	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms