RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 NBEAP1P0C6P0 100 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 ZNF705DP0CH99 300 aaPredicted RBP4.15□□□□□ -1.75
SMG6-219ENST00000575663 ZNF705BP0CI00 300 aaPredicted RBP4.15□□□□□ -1.75
SMG6-219ENST00000575663 ANXA7P20073 488 aaKnown RBP4.15□□□□□ -1.75
SMG6-219ENST00000575663 DDTP30046 118 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 FGF8P55075 233 aaPredicted RBP4.15□□□□□ -1.75
SMG6-219ENST00000575663 XGP55808 180 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 SNRPD3P62318 126 aaKnown RBP4.15□□□□□ -1.75
SMG6-219ENST00000575663 WT1-ASQ06250 92 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 CATR1Q13166 79 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 DHRS2Q13268 280 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 RAB31Q13636 194 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 CLINT1Q14677 625 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 PSG3Q16557 428 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 C5orf47Q569G3 176 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 PSMG4Q5JS54 123 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 ZNF705AQ6ZN79 300 aaPredicted RBP4.15□□□□□ -1.75
SMG6-219ENST00000575663 S100A7AQ86SG5 101 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 DMBX1Q8NFW5 382 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 OR10W1Q8NGF6 305 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 OR1L8Q8NGR8 309 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 MARCH1Q8TCQ1 289 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 RTBDNQ9BSG5 229 aaPredicted RBP4.15□□□□□ -1.75
SMG6-219ENST00000575663 TMPRSS5Q9H3S3 457 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 GEMIN7Q9H840 131 aaKnown RBP4.15□□□□□ -1.75
SMG6-219ENST00000575663 URGCP-MRPS24S4R325 110 aa4.15□□□□□ -1.75
SMG6-219ENST00000575663 IGKV1D-8A0A087WSZ0 117 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 C5orf52A6NGY3 159 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 CRYM-AS1A6NIL9 109 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 RBFOX2O43251 390 aaKnown RBP eCLIP4.14□□□□□ -1.75
SMG6-219ENST00000575663 TNFSF12O43508 249 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 HPRT1P00492 218 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 IGLV2-14P01704 120 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 HBE1P02100 147 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 C1QBP02746 253 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 PET100P0DJ07 73 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 RD3LP0DJH9 198 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 SLC25A6P12236 298 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 PGAM2P15259 253 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 NFYAP23511 347 aaPredicted RBP4.14□□□□□ -1.75
SMG6-219ENST00000575663 NPPCP23582 126 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 S100A11P31949 105 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 ERVFC1-1P60608 527 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 ERVK-16P61578 105 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 RPL19P84098 196 aaKnown RBP4.14□□□□□ -1.75
SMG6-219ENST00000575663 ICAM4Q14773 271 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 POU2AF1Q16633 256 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 ATP6V1FQ16864 119 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 COX19Q49B96 90 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 CLLU1Q5K131 121 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 OR8G2PQ6IF36 304 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 FAAP20Q6NZ36 180 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 TOMM20LQ6UXN7 152 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 TMED4Q7Z7H5 227 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 FAM219AQ8IW50 185 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 LGI3Q8N145 548 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 EIF4E3Q8N5X7 224 aaKnown RBP4.14□□□□□ -1.75
SMG6-219ENST00000575663 OR1P1Q8NH06 330 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 SAT2Q96F10 170 aaPredicted RBP4.14□□□□□ -1.75
SMG6-219ENST00000575663 ZNF503Q96F45 646 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 MISP3Q96FF7 219 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 ST6GAL2Q96JF0 529 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 TMEM56Q96MV1 263 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 METTL26Q96S19 204 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 RAB40CQ96S21 281 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 Q9H3A6 140 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 NAA60Q9H7X0 242 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 COMMD9Q9P000 198 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 MDFICQ9P1T7 246 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 PLA2G2DQ9UNK4 145 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 YTHDF2Q9Y5A9 579 aaKnown RBP4.14□□□□□ -1.75
SMG6-219ENST00000575663 TMEM56-RWDD3S4R434 201 aa4.14□□□□□ -1.75
SMG6-219ENST00000575663 TRAV3A0A0B4J244 114 aa4.13□□□□□ -1.75
SMG6-219ENST00000575663 IGKV1D-13A0A0B4J2D9 117 aa4.13□□□□□ -1.75
SMG6-219ENST00000575663 LOC102723971A0A1B0GUV8 181 aa4.13□□□□□ -1.75
SMG6-219ENST00000575663 HMSDA8MTL9 139 aa4.13□□□□□ -1.75
SMG6-219ENST00000575663 KRTAP29-1A8MX34 341 aaPredicted RBP4.13□□□□□ -1.75
SMG6-219ENST00000575663 CDS2O95674 445 aa4.13□□□□□ -1.75
SMG6-219ENST00000575663 MT-CO2P00403 227 aa4.13□□□□□ -1.75
SMG6-219ENST00000575663 APOHP02749 345 aaPredicted RBP4.13□□□□□ -1.75
SMG6-219ENST00000575663 SMR3BP02814 79 aaPredicted RBP4.13□□□□□ -1.75
SMG6-219ENST00000575663 IGKV1-13P0DP09 117 aa4.13□□□□□ -1.75
SMG6-219ENST00000575663 AKR1C4P17516 323 aa4.13□□□□□ -1.75
SMG6-219ENST00000575663 F2RP25116 425 aa4.13□□□□□ -1.75
SMG6-219ENST00000575663 P2RY1P47900 373 aa4.13□□□□□ -1.75
SMG6-219ENST00000575663 NPBWR1P48145 328 aa4.13□□□□□ -1.75
SMG6-219ENST00000575663 RAB5CP51148 216 aa4.13□□□□□ -1.75
SMG6-219ENST00000575663 PIGPP57054 158 aa4.13□□□□□ -1.75
SMG6-219ENST00000575663 BRWD1-AS2P59051 145 aa4.13□□□□□ -1.75
SMG6-219ENST00000575663 DLK1P80370 383 aa4.13□□□□□ -1.75
SMG6-219ENST00000575663 PPP1R1AQ13522 171 aa4.13□□□□□ -1.75
SMG6-219ENST00000575663 EIF4EBP1Q13541 118 aaPredicted RBP4.13□□□□□ -1.75
SMG6-219ENST00000575663 SSX7Q7RTT5 188 aa4.13□□□□□ -1.75
SMG6-219ENST00000575663 ZNF546Q86UE3 836 aa4.13□□□□□ -1.75
SMG6-219ENST00000575663 DCANP1Q8TF63 244 aa4.13□□□□□ -1.75
SMG6-219ENST00000575663 TMEM230Q96A57 120 aa4.13□□□□□ -1.75
SMG6-219ENST00000575663 NMES1Q9C002 83 aa4.13□□□□□ -1.75
SMG6-219ENST00000575663 TMEM222Q9H0R3 208 aa4.13□□□□□ -1.75
SMG6-219ENST00000575663 ZFAND3Q9H8U3 227 aa4.13□□□□□ -1.75
SMG6-219ENST00000575663 Q9H8V8 135 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms