RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 PRB4P10163 310 aaPredicted RBP12.01□□□□□ -0.49
PFN1-203ENST00000574872 M6PRP20645 277 aa12.01□□□□□ -0.49
PFN1-203ENST00000574872 HLA-DMBP28068 263 aa12.01□□□□□ -0.49
PFN1-203ENST00000574872 RHOBP62745 196 aa12.01□□□□□ -0.49
PFN1-203ENST00000574872 TMUB2Q71RG4 321 aa12.01□□□□□ -0.49
PFN1-203ENST00000574872 OR2G3Q8NGZ4 309 aa12.01□□□□□ -0.49
PFN1-203ENST00000574872 GNPNAT1Q96EK6 184 aaPredicted RBP12.01□□□□□ -0.49
PFN1-203ENST00000574872 FAM167A-AS1Q96KT0 104 aa12.01□□□□□ -0.49
PFN1-203ENST00000574872 AGRNO00468 2067 aa12□□□□□ -0.49
PFN1-203ENST00000574872 LCN15Q6UWW0 184 aa12□□□□□ -0.49
PFN1-203ENST00000574872 STHQ8IWL8 128 aa12□□□□□ -0.49
PFN1-203ENST00000574872 OR10G4Q8NGN3 311 aa12□□□□□ -0.49
PFN1-203ENST00000574872 OR10G9Q8NGN4 311 aa12□□□□□ -0.49
PFN1-203ENST00000574872 OR10G7Q8NGN6 311 aa12□□□□□ -0.49
PFN1-203ENST00000574872 BLNKQ8WV28 456 aa12□□□□□ -0.49
PFN1-203ENST00000574872 ZNF471Q9BX82 626 aaPredicted RBP12□□□□□ -0.49
PFN1-203ENST00000574872 HRH4Q9H3N8 390 aa12□□□□□ -0.49
PFN1-203ENST00000574872 ZNF586Q9NXT0 402 aa12□□□□□ -0.49
PFN1-203ENST00000574872 TMEM14CQ9P0S9 112 aa12□□□□□ -0.49
PFN1-203ENST00000574872 F6UB75 175 aa11.99□□□□□ -0.49
PFN1-203ENST00000574872 HMGB3O15347 200 aaKnown RBP11.99□□□□□ -0.49
PFN1-203ENST00000574872 OR7C2O60412 319 aa11.99□□□□□ -0.49
PFN1-203ENST00000574872 OR10J4P0C629 311 aa11.99□□□□□ -0.49
PFN1-203ENST00000574872 GDF5OSQ5U4N7 250 aa11.99□□□□□ -0.49
PFN1-203ENST00000574872 PAXXQ9BUH6 204 aa11.99□□□□□ -0.49
PFN1-203ENST00000574872 OR51M1Q9H341 326 aa11.99□□□□□ -0.49
PFN1-203ENST00000574872 RETNQ9HD89 108 aa11.99□□□□□ -0.49
PFN1-203ENST00000574872 HUWE1Q7Z6Z7 4374 aaKnown RBP11.99□□□□□ -0.49
PFN1-203ENST00000574872 A0A1W2PPV4 95 aa11.98□□□□□ -0.49
PFN1-203ENST00000574872 HIST1H1EP10412 219 aaKnown RBP11.98□□□□□ -0.49
PFN1-203ENST00000574872 SERF2P84101 59 aa11.98□□□□□ -0.49
PFN1-203ENST00000574872 LGALSLQ3ZCW2 172 aaPredicted RBP11.98□□□□□ -0.49
PFN1-203ENST00000574872 ZFP69Q49AA0 526 aa11.98□□□□□ -0.49
PFN1-203ENST00000574872 ZNF738Q8NE65 137 aa11.98□□□□□ -0.49
PFN1-203ENST00000574872 HYLS1Q96M11 299 aa11.98□□□□□ -0.49
PFN1-203ENST00000574872 ZNF331Q9NQX6 463 aaPredicted RBP11.98□□□□□ -0.49
PFN1-203ENST00000574872 RPRMQ9NS64 109 aa11.98□□□□□ -0.49
PFN1-203ENST00000574872 TRBV19A0A075B6N1 114 aa11.97□□□□□ -0.49
PFN1-203ENST00000574872 IGKV3-20P01619 116 aa11.97□□□□□ -0.49
PFN1-203ENST00000574872 MBP02144 154 aa11.97□□□□□ -0.49
PFN1-203ENST00000574872 CDC34P49427 236 aaPredicted RBP11.97□□□□□ -0.49
PFN1-203ENST00000574872 APOC4P55056 127 aa11.97□□□□□ -0.49
PFN1-203ENST00000574872 TAS2R45P59539 299 aa11.97□□□□□ -0.49
PFN1-203ENST00000574872 KHDC3LQ587J8 217 aa11.97□□□□□ -0.49
PFN1-203ENST00000574872 TMEM41BQ5BJD5 291 aa11.97□□□□□ -0.49
PFN1-203ENST00000574872 FOXI2Q6ZQN5 318 aa11.97□□□□□ -0.49
PFN1-203ENST00000574872 TRPT1Q86TN4 253 aaKnown RBP11.97□□□□□ -0.49
PFN1-203ENST00000574872 RPP25LQ8N5L8 163 aaKnown RBP11.97□□□□□ -0.49
PFN1-203ENST00000574872 FXYD5Q96DB9 178 aa11.97□□□□□ -0.49
PFN1-203ENST00000574872 SAT2Q96F10 170 aaPredicted RBP11.97□□□□□ -0.49
PFN1-203ENST00000574872 ZNF503Q96F45 646 aa11.97□□□□□ -0.49
PFN1-203ENST00000574872 SLC50A1Q9BRV3 221 aa11.97□□□□□ -0.49
PFN1-203ENST00000574872 HLA-DRB4P13762 266 aa11.96□□□□□ -0.49
PFN1-203ENST00000574872 UBE2L3P68036 154 aaKnown RBP11.96□□□□□ -0.49
PFN1-203ENST00000574872 GUK1Q16774 197 aa11.96□□□□□ -0.49
PFN1-203ENST00000574872 AKR1C8PQ5T2L2 129 aa11.96□□□□□ -0.49
PFN1-203ENST00000574872 EBLN2Q6P2I7 272 aa11.96□□□□□ -0.49
PFN1-203ENST00000574872 RNF141Q8WVD5 230 aa11.96□□□□□ -0.49
PFN1-203ENST00000574872 TM2D3Q9BRN9 247 aa11.96□□□□□ -0.49
PFN1-203ENST00000574872 SAV1Q9H4B6 383 aaPredicted RBP11.96□□□□□ -0.49
PFN1-203ENST00000574872 HLA-DRB4X5D2U9 266 aa11.96□□□□□ -0.49
PFN1-203ENST00000574872 NBEAL2Q6ZNJ1 2754 aa11.96□□□□□ -0.5
PFN1-203ENST00000574872 COL7A1Q02388 2944 aa11.95□□□□□ -0.5
PFN1-203ENST00000574872 ZNF705FA8MVS1 300 aaPredicted RBP11.95□□□□□ -0.5
PFN1-203ENST00000574872 H3BMM0 161 aa11.95□□□□□ -0.5
PFN1-203ENST00000574872 NDUFB4O95168 129 aa11.95□□□□□ -0.5
PFN1-203ENST00000574872 NBEAP1P0C6P0 100 aa11.95□□□□□ -0.5
PFN1-203ENST00000574872 NHLRC4P0CG21 123 aaPredicted RBP11.95□□□□□ -0.5
PFN1-203ENST00000574872 ZNF705DP0CH99 300 aaPredicted RBP11.95□□□□□ -0.5
PFN1-203ENST00000574872 ZNF705BP0CI00 300 aaPredicted RBP11.95□□□□□ -0.5
PFN1-203ENST00000574872 SPP1P10451 314 aa11.95□□□□□ -0.5
PFN1-203ENST00000574872 PSG3Q16557 428 aa11.95□□□□□ -0.5
PFN1-203ENST00000574872 OR4B1Q8NGF8 309 aa11.95□□□□□ -0.5
PFN1-203ENST00000574872 RAB24Q969Q5 203 aa11.95□□□□□ -0.5
PFN1-203ENST00000574872 SPATA25Q9BR10 227 aa11.95□□□□□ -0.5
PFN1-203ENST00000574872 CSTL1Q9H114 145 aa11.95□□□□□ -0.5
PFN1-203ENST00000574872 ZMAT4Q9H898 229 aa11.95□□□□□ -0.5
PFN1-203ENST00000574872 KIR2DL5BA0A0G2JN68 375 aa11.94□□□□□ -0.5
PFN1-203ENST00000574872 KIR2DL5BA0A0G2JPC4 375 aa11.94□□□□□ -0.5
PFN1-203ENST00000574872 A0A0J9YX75 114 aa11.94□□□□□ -0.5
PFN1-203ENST00000574872 CA1P00915 261 aaPredicted RBP11.94□□□□□ -0.5
PFN1-203ENST00000574872 NKX2-5P52952 324 aaPredicted RBP11.94□□□□□ -0.5
PFN1-203ENST00000574872 DEFB135Q30KP9 77 aa11.94□□□□□ -0.5
PFN1-203ENST00000574872 SSX7Q7RTT5 188 aa11.94□□□□□ -0.5
PFN1-203ENST00000574872 KIR2DL5AQ8N109 375 aa11.94□□□□□ -0.5
PFN1-203ENST00000574872 EXOC3-AS1Q8N2X6 119 aa11.94□□□□□ -0.5
PFN1-203ENST00000574872 C9orf62Q8N4C0 152 aa11.94□□□□□ -0.5
PFN1-203ENST00000574872 KIR2DL5BQ8NHK3 375 aa11.94□□□□□ -0.5
PFN1-203ENST00000574872 RPUSD4Q96CM3 377 aaKnown RBP11.94□□□□□ -0.5
PFN1-203ENST00000574872 PHYHIPLQ96FC7 376 aa11.94□□□□□ -0.5
PFN1-203ENST00000574872 ACTR3CQ9C0K3 210 aaPredicted RBP11.94□□□□□ -0.5
PFN1-203ENST00000574872 TENM3Q9P273 2699 aa11.93□□□□□ -0.5
PFN1-203ENST00000574872 ZNF253O75346 499 aa11.93□□□□□ -0.5
PFN1-203ENST00000574872 ARL14EPLP0DKL9 152 aa11.93□□□□□ -0.5
PFN1-203ENST00000574872 TPT1P13693 172 aaKnown RBP11.93□□□□□ -0.5
PFN1-203ENST00000574872 C4BPBP20851 252 aa11.93□□□□□ -0.5
PFN1-203ENST00000574872 FXYD7P58549 80 aa11.93□□□□□ -0.5
PFN1-203ENST00000574872 EIF5AP63241 154 aaKnown RBP11.93□□□□□ -0.5
PFN1-203ENST00000574872 HIST1H1AQ02539 215 aaPredicted RBP11.93□□□□□ -0.5
PFN1-203ENST00000574872 PDE6HQ13956 83 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms