RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 M6PRP20645 277 aa9.41□□□□□ -0.9
TRAPPC1-206ENST00000573989 KHDC3LQ587J8 217 aa9.41□□□□□ -0.9
TRAPPC1-206ENST00000573989 MORN5Q5VZ52 161 aa9.41□□□□□ -0.9
TRAPPC1-206ENST00000573989 TRPT1Q86TN4 253 aaKnown RBP9.41□□□□□ -0.9
TRAPPC1-206ENST00000573989 SAV1Q9H4B6 383 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC1-206ENST00000573989 TP53TG1Q9Y2A0 90 aa9.41□□□□□ -0.9
TRAPPC1-206ENST00000573989 HLA-DRB4X5D2U9 266 aa9.41□□□□□ -0.9
TRAPPC1-206ENST00000573989 ZNF253O75346 499 aa9.4□□□□□ -0.9
TRAPPC1-206ENST00000573989 CA1P00915 261 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC1-206ENST00000573989 IGLC2P0DOY2 106 aa9.4□□□□□ -0.9
TRAPPC1-206ENST00000573989 HIST1H1EP10412 219 aaKnown RBP9.4□□□□□ -0.9
TRAPPC1-206ENST00000573989 ATP6V0CP27449 155 aa9.4□□□□□ -0.9
TRAPPC1-206ENST00000573989 PDE6HQ13956 83 aa9.4□□□□□ -0.9
TRAPPC1-206ENST00000573989 PSG3Q16557 428 aa9.4□□□□□ -0.9
TRAPPC1-206ENST00000573989 MIR17HGQ75NE6 70 aa9.4□□□□□ -0.9
TRAPPC1-206ENST00000573989 ZNF738Q8NE65 137 aa9.4□□□□□ -0.9
TRAPPC1-206ENST00000573989 OR2G3Q8NGZ4 309 aa9.4□□□□□ -0.9
TRAPPC1-206ENST00000573989 C17orf77Q96MU5 243 aa9.4□□□□□ -0.9
TRAPPC1-206ENST00000573989 C1QTNF4Q9BXJ3 329 aa9.4□□□□□ -0.9
TRAPPC1-206ENST00000573989 OR51M1Q9H341 326 aa9.4□□□□□ -0.9
TRAPPC1-206ENST00000573989 ZNF331Q9NQX6 463 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC1-206ENST00000573989 DNAH9Q9NYC9 4486 aa9.39□□□□□ -0.91
TRAPPC1-206ENST00000573989 KANTRA0A1W2PQU2 76 aa9.39□□□□□ -0.91
TRAPPC1-206ENST00000573989 H3BMM0 161 aa9.39□□□□□ -0.91
TRAPPC1-206ENST00000573989 SPRY2O43597 315 aa9.39□□□□□ -0.91
TRAPPC1-206ENST00000573989 OR7C2O60412 319 aa9.39□□□□□ -0.91
TRAPPC1-206ENST00000573989 DUSP14O95147 198 aaKnown RBP9.39□□□□□ -0.91
TRAPPC1-206ENST00000573989 PSG9Q00887 426 aa9.39□□□□□ -0.91
TRAPPC1-206ENST00000573989 DEFB135Q30KP9 77 aa9.39□□□□□ -0.91
TRAPPC1-206ENST00000573989 RPL7L1Q6DKI1 246 aaKnown RBP9.39□□□□□ -0.91
TRAPPC1-206ENST00000573989 AKAP14Q86UN6 197 aa9.39□□□□□ -0.91
TRAPPC1-206ENST00000573989 TCTE3Q8IZS6 198 aa9.39□□□□□ -0.91
TRAPPC1-206ENST00000573989 KCNRGQ8N5I3 272 aa9.39□□□□□ -0.91
TRAPPC1-206ENST00000573989 RNF182Q8N6D2 247 aa9.39□□□□□ -0.91
TRAPPC1-206ENST00000573989 OR4B1Q8NGF8 309 aa9.39□□□□□ -0.91
TRAPPC1-206ENST00000573989 OR10G4Q8NGN3 311 aa9.39□□□□□ -0.91
TRAPPC1-206ENST00000573989 OR10G9Q8NGN4 311 aa9.39□□□□□ -0.91
TRAPPC1-206ENST00000573989 OR10G7Q8NGN6 311 aa9.39□□□□□ -0.91
TRAPPC1-206ENST00000573989 ARPC5LQ9BPX5 153 aa9.39□□□□□ -0.91
TRAPPC1-206ENST00000573989 PAXXQ9BUH6 204 aa9.39□□□□□ -0.91
TRAPPC1-206ENST00000573989 SLC25A2Q9BXI2 301 aa9.39□□□□□ -0.91
TRAPPC1-206ENST00000573989 COL7A1Q02388 2944 aa9.39□□□□□ -0.91
TRAPPC1-206ENST00000573989 hCG_2014768A0A024R1R8 64 aa9.38□□□□□ -0.91
TRAPPC1-206ENST00000573989 TRAV8-2A0A0B4J237 113 aa9.38□□□□□ -0.91
TRAPPC1-206ENST00000573989 A0A0J9YX75 114 aa9.38□□□□□ -0.91
TRAPPC1-206ENST00000573989 H3BQ15 152 aa9.38□□□□□ -0.91
TRAPPC1-206ENST00000573989 SNRPCP09234 159 aaKnown RBP9.38□□□□□ -0.91
TRAPPC1-206ENST00000573989 EIF5AP63241 154 aaKnown RBP9.38□□□□□ -0.91
TRAPPC1-206ENST00000573989 RNF183Q96D59 192 aa9.38□□□□□ -0.91
TRAPPC1-206ENST00000573989 ST6GAL2Q96JF0 529 aa9.38□□□□□ -0.91
TRAPPC1-206ENST00000573989 C20orf173Q96LM9 149 aa9.38□□□□□ -0.91
TRAPPC1-206ENST00000573989 CLUHP3Q96NS8 147 aa9.38□□□□□ -0.91
TRAPPC1-206ENST00000573989 AAMDCQ9H7C9 122 aa9.38□□□□□ -0.91
TRAPPC1-206ENST00000573989 ZNF586Q9NXT0 402 aa9.38□□□□□ -0.91
TRAPPC1-206ENST00000573989 TRBV19A0A075B6N1 114 aa9.37□□□□□ -0.91
TRAPPC1-206ENST00000573989 H3BTX0 84 aa9.37□□□□□ -0.91
TRAPPC1-206ENST00000573989 PFDN1O60925 122 aa9.37□□□□□ -0.91
TRAPPC1-206ENST00000573989 NBEAP1P0C6P0 100 aa9.37□□□□□ -0.91
TRAPPC1-206ENST00000573989 PYYP10082 97 aa9.37□□□□□ -0.91
TRAPPC1-206ENST00000573989 CDC34P49427 236 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC1-206ENST00000573989 RAB2AP61019 212 aa9.37□□□□□ -0.91
TRAPPC1-206ENST00000573989 IGFL4Q6B9Z1 124 aa9.37□□□□□ -0.91
TRAPPC1-206ENST00000573989 FAM122CQ6P4D5 195 aa9.37□□□□□ -0.91
TRAPPC1-206ENST00000573989 PQLC2Q6ZP29 291 aa9.37□□□□□ -0.91
TRAPPC1-206ENST00000573989 OR11H4Q8NGC9 324 aa9.37□□□□□ -0.91
TRAPPC1-206ENST00000573989 BLNKQ8WV28 456 aa9.37□□□□□ -0.91
TRAPPC1-206ENST00000573989 RNF141Q8WVD5 230 aa9.37□□□□□ -0.91
TRAPPC1-206ENST00000573989 RPUSD4Q96CM3 377 aaKnown RBP9.37□□□□□ -0.91
TRAPPC1-206ENST00000573989 SAT2Q96F10 170 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC1-206ENST00000573989 FAM167A-AS1Q96KT0 104 aa9.37□□□□□ -0.91
TRAPPC1-206ENST00000573989 WWC2-AS2Q96NR7 200 aa9.37□□□□□ -0.91
TRAPPC1-206ENST00000573989 OVOL2Q9BRP0 275 aa9.37□□□□□ -0.91
TRAPPC1-206ENST00000573989 RETNQ9HD89 108 aa9.37□□□□□ -0.91
TRAPPC1-206ENST00000573989 PPP1R14DQ9NXH3 145 aa9.37□□□□□ -0.91
TRAPPC1-206ENST00000573989 PRELID1Q9Y255 219 aa9.37□□□□□ -0.91
TRAPPC1-206ENST00000573989 SLC17A3O00476 420 aa9.36□□□□□ -0.91
TRAPPC1-206ENST00000573989 IGKV3-20P01619 116 aa9.36□□□□□ -0.91
TRAPPC1-206ENST00000573989 OR10J4P0C629 311 aa9.36□□□□□ -0.91
TRAPPC1-206ENST00000573989 UBE2L3P68036 154 aaKnown RBP9.36□□□□□ -0.91
TRAPPC1-206ENST00000573989 AKR1C8PQ5T2L2 129 aa9.36□□□□□ -0.91
TRAPPC1-206ENST00000573989 GDF5OSQ5U4N7 250 aa9.36□□□□□ -0.91
TRAPPC1-206ENST00000573989 OR8A1Q8NGG7 326 aa9.36□□□□□ -0.91
TRAPPC1-206ENST00000573989 OR10J6PQ8NGY7 276 aa9.36□□□□□ -0.91
TRAPPC1-206ENST00000573989 HYLS1Q96M11 299 aa9.36□□□□□ -0.91
TRAPPC1-206ENST00000573989 ACTR3CQ9C0K3 210 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC1-206ENST00000573989 SH3BGRL3Q9H299 93 aa9.36□□□□□ -0.91
TRAPPC1-206ENST00000573989 RFNGQ9Y644 331 aa9.36□□□□□ -0.91
TRAPPC1-206ENST00000573989 NBEAL2Q6ZNJ1 2754 aa9.35□□□□□ -0.91
TRAPPC1-206ENST00000573989 F6UB75 175 aa9.35□□□□□ -0.91
TRAPPC1-206ENST00000573989 BCL2L11O43521 198 aa9.35□□□□□ -0.91
TRAPPC1-206ENST00000573989 C1QBP02746 253 aa9.35□□□□□ -0.91
TRAPPC1-206ENST00000573989 AMBPP02760 352 aa9.35□□□□□ -0.91
TRAPPC1-206ENST00000573989 C4BPBP20851 252 aa9.35□□□□□ -0.91
TRAPPC1-206ENST00000573989 DEFB1P60022 68 aa9.35□□□□□ -0.91
TRAPPC1-206ENST00000573989 HIST1H1AQ02539 215 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC1-206ENST00000573989 LYPD1Q8N2G4 141 aa9.35□□□□□ -0.91
TRAPPC1-206ENST00000573989 MRPL53Q96EL3 112 aaKnown RBP9.35□□□□□ -0.91
TRAPPC1-206ENST00000573989 RARRES2Q99969 163 aa9.35□□□□□ -0.91
TRAPPC1-206ENST00000573989 ZNF471Q9BX82 626 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC1-206ENST00000573989 HLA-DMBP28068 263 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms