RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 C9orf170A2RU37 121 aa15.33■□□□□ 0.04
SNF8-216ENST00000573795 NOL3O60936 208 aaKnown RBP15.33■□□□□ 0.04
SNF8-216ENST00000573795 OR5G3P0C626 314 aa15.33■□□□□ 0.04
SNF8-216ENST00000573795 RNASE8Q8TDE3 154 aaKnown RBP15.33■□□□□ 0.04
SNF8-216ENST00000573795 C16orf74Q96GX8 76 aa15.33■□□□□ 0.04
SNF8-216ENST00000573795 K7EPK0 472 aa15.32■□□□□ 0.04
SNF8-216ENST00000573795 SSSCA1O60232 199 aa15.32■□□□□ 0.04
SNF8-216ENST00000573795 CDK2AP2O75956 126 aa15.32■□□□□ 0.04
SNF8-216ENST00000573795 UBE2MP61081 183 aaKnown RBP15.32■□□□□ 0.04
SNF8-216ENST00000573795 RRAS2P62070 204 aaPredicted RBP15.32■□□□□ 0.04
SNF8-216ENST00000573795 SELENOTP62341 195 aa15.32■□□□□ 0.04
SNF8-216ENST00000573795 DLK1P80370 383 aa15.32■□□□□ 0.04
SNF8-216ENST00000573795 KIR3DS1Q14943 382 aa15.32■□□□□ 0.04
SNF8-216ENST00000573795 TMEM14EPQ6UXP3 125 aa15.32■□□□□ 0.04
SNF8-216ENST00000573795 CCDC190Q86UF4 302 aa15.32■□□□□ 0.04
SNF8-216ENST00000573795 HTN1P15515 57 aa15.31■□□□□ 0.04
SNF8-216ENST00000573795 CCL18P55774 89 aa15.31■□□□□ 0.04
SNF8-216ENST00000573795 RPUSD4Q96CM3 377 aaKnown RBP15.31■□□□□ 0.04
SNF8-216ENST00000573795 SMIM8Q96KF7 97 aa15.31■□□□□ 0.04
SNF8-216ENST00000573795 ARL6Q9H0F7 186 aa15.31■□□□□ 0.04
SNF8-216ENST00000573795 TIMM8BQ9Y5J9 83 aaPredicted RBP15.31■□□□□ 0.04
SNF8-216ENST00000573795 METTL15P1P0C7V9 234 aa15.3■□□□□ 0.04
SNF8-216ENST00000573795 CDKN1BP46527 198 aa15.3■□□□□ 0.04
SNF8-216ENST00000573795 SLC38A11Q08AI6 406 aa15.3■□□□□ 0.04
SNF8-216ENST00000573795 KRTAP1-5Q9BYS1 174 aa15.3■□□□□ 0.04
SNF8-216ENST00000573795 ARV1Q9H2C2 271 aa15.3■□□□□ 0.04
SNF8-216ENST00000573795 NOP10Q9NPE3 64 aaKnown RBP15.3■□□□□ 0.04
SNF8-216ENST00000573795 FNDC10F2Z333 226 aa15.29■□□□□ 0.04
SNF8-216ENST00000573795 SSX7Q7RTT5 188 aa15.29■□□□□ 0.04
SNF8-216ENST00000573795 LINC00612Q8N6U2 182 aa15.29■□□□□ 0.04
SNF8-216ENST00000573795 TMEM263Q8WUH6 116 aaKnown RBP15.29■□□□□ 0.04
SNF8-216ENST00000573795 PARD6GQ9BYG4 376 aaPredicted RBP15.29■□□□□ 0.04
SNF8-216ENST00000573795 NPVFQ9HCQ7 196 aa15.29■□□□□ 0.04
SNF8-216ENST00000573795 ZNF331Q9NQX6 463 aaPredicted RBP15.29■□□□□ 0.04
SNF8-216ENST00000573795 PPP1R14DQ9NXH3 145 aa15.29■□□□□ 0.04
SNF8-216ENST00000573795 FLVCR2Q9UPI3 526 aa15.29■□□□□ 0.04
SNF8-216ENST00000573795 SNRPCP09234 159 aaKnown RBP15.28■□□□□ 0.04
SNF8-216ENST00000573795 CXCL2P19875 107 aa15.28■□□□□ 0.04
SNF8-216ENST00000573795 ARL16Q0P5N6 197 aa15.28■□□□□ 0.04
SNF8-216ENST00000573795 ZNF493Q6ZR52 646 aa15.28■□□□□ 0.04
SNF8-216ENST00000573795 LRRC20Q8TCA0 184 aa15.28■□□□□ 0.04
SNF8-216ENST00000573795 PRAC2D3DTV9 90 aa15.27■□□□□ 0.04
SNF8-216ENST00000573795 NDUFB6O95139 128 aa15.27■□□□□ 0.04
SNF8-216ENST00000573795 TEPPQ6URK8 271 aa15.27■□□□□ 0.04
SNF8-216ENST00000573795 ZBTB8BQ8NAP8 495 aaPredicted RBP15.27■□□□□ 0.04
SNF8-216ENST00000573795 SRRQ9GZT4 340 aa15.27■□□□□ 0.04
SNF8-216ENST00000573795 H7BYZ3 331 aa15.26■□□□□ 0.03
SNF8-216ENST00000573795 SLC17A3O00476 420 aa15.26■□□□□ 0.03
SNF8-216ENST00000573795 GFI1BQ5VTD9 330 aa15.26■□□□□ 0.03
SNF8-216ENST00000573795 MORN5Q5VZ52 161 aa15.26■□□□□ 0.03
SNF8-216ENST00000573795 LCN15Q6UWW0 184 aa15.26■□□□□ 0.03
SNF8-216ENST00000573795 MAPKAPK5-AS1Q8N8E1 139 aa15.26■□□□□ 0.03
SNF8-216ENST00000573795 RCL1Q9Y2P8 373 aaKnown RBP15.26■□□□□ 0.03
SNF8-216ENST00000573795 OR4E1P0C645 316 aa15.25■□□□□ 0.03
SNF8-216ENST00000573795 ANXA7P20073 488 aaKnown RBP15.25■□□□□ 0.03
SNF8-216ENST00000573795 HOXA5P20719 270 aa15.25■□□□□ 0.03
SNF8-216ENST00000573795 CLINT1Q14677 625 aa15.25■□□□□ 0.03
SNF8-216ENST00000573795 LINC00305Q7Z4B0 112 aa15.25■□□□□ 0.03
SNF8-216ENST00000573795 OR10P1Q8NGE3 313 aa15.25■□□□□ 0.03
SNF8-216ENST00000573795 C20orf144Q9BQM9 153 aa15.25■□□□□ 0.03
SNF8-216ENST00000573795 SLC50A1Q9BRV3 221 aa15.25■□□□□ 0.03
SNF8-216ENST00000573795 Q9H8V8 135 aa15.25■□□□□ 0.03
SNF8-216ENST00000573795 TRAV26-1A0A087WT03 109 aa15.24■□□□□ 0.03
SNF8-216ENST00000573795 H3BTX0 84 aa15.24■□□□□ 0.03
SNF8-216ENST00000573795 AGPAT2O15120 278 aa15.24■□□□□ 0.03
SNF8-216ENST00000573795 TSC22D2O75157 780 aa15.24■□□□□ 0.03
SNF8-216ENST00000573795 S100A5P33763 92 aa15.24■□□□□ 0.03
SNF8-216ENST00000573795 BAK1Q16611 211 aa15.24■□□□□ 0.03
SNF8-216ENST00000573795 PXDC1Q5TGL8 231 aa15.24■□□□□ 0.03
SNF8-216ENST00000573795 S100A7AQ86SG5 101 aa15.24■□□□□ 0.03
SNF8-216ENST00000573795 TMEM37Q8WXS4 190 aa15.24■□□□□ 0.03
SNF8-216ENST00000573795 MGAT4CQ9UBM8 478 aa15.24■□□□□ 0.03
SNF8-216ENST00000573795 ZNF701M0R085 212 aaPredicted RBP15.23■□□□□ 0.03
SNF8-216ENST00000573795 SCGB1D2O95969 90 aa15.23■□□□□ 0.03
SNF8-216ENST00000573795 BTCP35070 178 aa15.23■□□□□ 0.03
SNF8-216ENST00000573795 TAS2R30P59541 319 aa15.23■□□□□ 0.03
SNF8-216ENST00000573795 OR5I1Q13606 314 aa15.23■□□□□ 0.03
SNF8-216ENST00000573795 SPATA12Q7Z6I5 190 aa15.23■□□□□ 0.03
SNF8-216ENST00000573795 ZNF546Q86UE3 836 aa15.23■□□□□ 0.03
SNF8-216ENST00000573795 OR10J6PQ8NGY7 276 aa15.23■□□□□ 0.03
SNF8-216ENST00000573795 RXFP4Q8TDU9 374 aa15.23■□□□□ 0.03
SNF8-216ENST00000573795 GNPNAT1Q96EK6 184 aaPredicted RBP15.23■□□□□ 0.03
SNF8-216ENST00000573795 MGST2Q99735 147 aa15.23■□□□□ 0.03
SNF8-216ENST00000573795 A0A0J9YY99 117 aa15.22■□□□□ 0.03
SNF8-216ENST00000573795 IGLC2P0DOY2 106 aa15.22■□□□□ 0.03
SNF8-216ENST00000573795 M6PRP20645 277 aa15.22■□□□□ 0.03
SNF8-216ENST00000573795 OPCMLQ14982 345 aa15.22■□□□□ 0.03
SNF8-216ENST00000573795 IAH1Q2TAA2 248 aaPredicted RBP15.22■□□□□ 0.03
SNF8-216ENST00000573795 ZNF503Q96F45 646 aa15.22■□□□□ 0.03
SNF8-216ENST00000573795 Q9H3A6 140 aa15.22■□□□□ 0.03
SNF8-216ENST00000573795 RNF24Q9Y225 148 aa15.22■□□□□ 0.03
SNF8-216ENST00000573795 LINC00854A0A1B0GVQ3 168 aa15.21■□□□□ 0.03
SNF8-216ENST00000573795 NAP1L6A6NFF2 107 aa15.21■□□□□ 0.03
SNF8-216ENST00000573795 H3BQ15 152 aa15.21■□□□□ 0.03
SNF8-216ENST00000573795 GOSR2O14653 212 aa15.21■□□□□ 0.03
SNF8-216ENST00000573795 ESRGQ1W209 222 aa15.21■□□□□ 0.03
SNF8-216ENST00000573795 BPIFA4PQ86YQ2 179 aa15.21■□□□□ 0.03
SNF8-216ENST00000573795 SAT2Q96F10 170 aaPredicted RBP15.21■□□□□ 0.03
SNF8-216ENST00000573795 UPK3BQ9BT76 320 aa15.21■□□□□ 0.03
SNF8-216ENST00000573795 HERC1Q15751 4861 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms