RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 OR8A1Q8NGG7 326 aa12.78□□□□□ -0.36
CHD3-214ENST00000572579 TMEM37Q8WXS4 190 aa12.78□□□□□ -0.36
CHD3-214ENST00000572579 FAM210BQ96KR6 192 aa12.78□□□□□ -0.36
CHD3-214ENST00000572579 ARV1Q9H2C2 271 aa12.78□□□□□ -0.36
CHD3-214ENST00000572579 RYR1P21817 5038 aa12.77□□□□□ -0.36
CHD3-214ENST00000572579 KIR3DS1Q14943 382 aa12.77□□□□□ -0.37
CHD3-214ENST00000572579 PSG3Q16557 428 aa12.77□□□□□ -0.37
CHD3-214ENST00000572579 TEPPQ6URK8 271 aa12.77□□□□□ -0.37
CHD3-214ENST00000572579 LINC00336Q6ZUF6 198 aa12.77□□□□□ -0.37
CHD3-214ENST00000572579 MGST2Q99735 147 aa12.77□□□□□ -0.37
CHD3-214ENST00000572579 IGLV2-18A0A075B6J9 118 aa12.76□□□□□ -0.37
CHD3-214ENST00000572579 PRAC2D3DTV9 90 aa12.76□□□□□ -0.37
CHD3-214ENST00000572579 AGPAT2O15120 278 aa12.76□□□□□ -0.37
CHD3-214ENST00000572579 HIST1H1AQ02539 215 aaPredicted RBP12.76□□□□□ -0.37
CHD3-214ENST00000572579 LGALS9BQ3B8N2 356 aa12.76□□□□□ -0.37
CHD3-214ENST00000572579 TMEM208Q9BTX3 173 aa12.76□□□□□ -0.37
CHD3-214ENST00000572579 C20orf85Q9H1P6 137 aa12.76□□□□□ -0.37
CHD3-214ENST00000572579 TEX48A0A1B0GUV7 120 aa12.75□□□□□ -0.37
CHD3-214ENST00000572579 CENPXA8MT69 81 aa12.75□□□□□ -0.37
CHD3-214ENST00000572579 H3BTX0 84 aa12.75□□□□□ -0.37
CHD3-214ENST00000572579 BOLA2-SMG1P6H3BVE0 249 aa12.75□□□□□ -0.37
CHD3-214ENST00000572579 INSP01308 110 aa12.75□□□□□ -0.37
CHD3-214ENST00000572579 DAD1P61803 113 aa12.75□□□□□ -0.37
CHD3-214ENST00000572579 SEC22CQ9BRL7 303 aa12.75□□□□□ -0.37
CHD3-214ENST00000572579 SLC17A3O00476 420 aa12.74□□□□□ -0.37
CHD3-214ENST00000572579 TSPOP30536 169 aa12.74□□□□□ -0.37
CHD3-214ENST00000572579 LINC00305Q7Z4B0 112 aa12.74□□□□□ -0.37
CHD3-214ENST00000572579 RPUSD4Q96CM3 377 aaKnown RBP12.74□□□□□ -0.37
CHD3-214ENST00000572579 GGACTQ9BVM4 153 aa12.74□□□□□ -0.37
CHD3-214ENST00000572579 ZNF331Q9NQX6 463 aaPredicted RBP12.74□□□□□ -0.37
CHD3-214ENST00000572579 TRAV6A0A075B6T7 132 aa12.73□□□□□ -0.37
CHD3-214ENST00000572579 TRAV5A0A0B4J249 113 aa12.73□□□□□ -0.37
CHD3-214ENST00000572579 PRSS29PA6NIE9 313 aa12.73□□□□□ -0.37
CHD3-214ENST00000572579 H3BQ15 152 aa12.73□□□□□ -0.37
CHD3-214ENST00000572579 LYRM1O43325 122 aa12.73□□□□□ -0.37
CHD3-214ENST00000572579 TCRBP04435 133 aa12.73□□□□□ -0.37
CHD3-214ENST00000572579 S100A7P31151 101 aa12.73□□□□□ -0.37
CHD3-214ENST00000572579 IL15RAQ13261 267 aa12.73□□□□□ -0.37
CHD3-214ENST00000572579 PARD6GQ9BYG4 376 aaPredicted RBP12.73□□□□□ -0.37
CHD3-214ENST00000572579 MGAT4CQ9UBM8 478 aa12.73□□□□□ -0.37
CHD3-214ENST00000572579 FAM24AA6NFZ4 105 aa12.72□□□□□ -0.37
CHD3-214ENST00000572579 LYRM9A8MSI8 78 aa12.72□□□□□ -0.37
CHD3-214ENST00000572579 GOSR2O14653 212 aa12.72□□□□□ -0.37
CHD3-214ENST00000572579 IGLC2P0DOY2 106 aa12.72□□□□□ -0.37
CHD3-214ENST00000572579 DEFB130BP0DP73 79 aa12.72□□□□□ -0.37
CHD3-214ENST00000572579 DEFB130AP0DP74 79 aa12.72□□□□□ -0.37
CHD3-214ENST00000572579 RHOBP62745 196 aa12.72□□□□□ -0.37
CHD3-214ENST00000572579 OPCMLQ14982 345 aa12.72□□□□□ -0.37
CHD3-214ENST00000572579 SAT2Q96F10 170 aaPredicted RBP12.72□□□□□ -0.37
CHD3-214ENST00000572579 LINC01587Q99440 93 aa12.72□□□□□ -0.37
CHD3-214ENST00000572579 CST7O76096 145 aa12.71□□□□□ -0.37
CHD3-214ENST00000572579 RNF212Q495C1 297 aa12.71□□□□□ -0.37
CHD3-214ENST00000572579 PXDC1Q5TGL8 231 aa12.71□□□□□ -0.37
CHD3-214ENST00000572579 MIC13Q5XKP0 118 aa12.71□□□□□ -0.37
CHD3-214ENST00000572579 ZNF546Q86UE3 836 aa12.71□□□□□ -0.37
CHD3-214ENST00000572579 ZNF431Q8TF32 576 aaPredicted RBP12.71□□□□□ -0.37
CHD3-214ENST00000572579 LSM5Q9Y4Y9 91 aaKnown RBP12.71□□□□□ -0.37
CHD3-214ENST00000572579 LRP1BQ9NZR2 4599 aa12.7□□□□□ -0.38
CHD3-214ENST00000572579 FAM25EA8MYX2 175 aa12.7□□□□□ -0.38
CHD3-214ENST00000572579 TAS2R60P59551 318 aa12.7□□□□□ -0.38
CHD3-214ENST00000572579 CNPY1Q3B7I2 92 aa12.7□□□□□ -0.38
CHD3-214ENST00000572579 UBE2DNLQ8IWF7 75 aa12.7□□□□□ -0.38
CHD3-214ENST00000572579 NUDT15Q9NV35 164 aa12.7□□□□□ -0.38
CHD3-214ENST00000572579 ABCA13Q86UQ4 5058 aa12.69□□□□□ -0.38
CHD3-214ENST00000572579 HTN1P15515 57 aa12.69□□□□□ -0.38
CHD3-214ENST00000572579 B2MP61769 119 aa12.69□□□□□ -0.38
CHD3-214ENST00000572579 VWC2Q2TAL6 325 aa12.69□□□□□ -0.38
CHD3-214ENST00000572579 NRARPQ7Z6K4 114 aa12.69□□□□□ -0.38
CHD3-214ENST00000572579 LRRC20Q8TCA0 184 aa12.69□□□□□ -0.38
CHD3-214ENST00000572579 RNASE8Q8TDE3 154 aaKnown RBP12.69□□□□□ -0.38
CHD3-214ENST00000572579 DNAJC4Q9NNZ3 241 aa12.69□□□□□ -0.38
CHD3-214ENST00000572579 WDR83OSQ9Y284 106 aa12.69□□□□□ -0.38
CHD3-214ENST00000572579 HSPG2P98160 4391 aa12.69□□□□□ -0.38
CHD3-214ENST00000572579 IGSF23A1L1A6 192 aa12.68□□□□□ -0.38
CHD3-214ENST00000572579 COX7A2P2O60397 106 aa12.68□□□□□ -0.38
CHD3-214ENST00000572579 CXCL2P19875 107 aa12.68□□□□□ -0.38
CHD3-214ENST00000572579 CDKN1BP46527 198 aa12.68□□□□□ -0.38
CHD3-214ENST00000572579 CAMLGP49069 296 aa12.68□□□□□ -0.38
CHD3-214ENST00000572579 C10orf113Q5VZT2 155 aa12.68□□□□□ -0.38
CHD3-214ENST00000572579 LCN15Q6UWW0 184 aa12.68□□□□□ -0.38
CHD3-214ENST00000572579 C2orf50Q96LR7 162 aa12.68□□□□□ -0.38
CHD3-214ENST00000572579 NACAE9PAV3 2078 aa12.68□□□□□ -0.38
CHD3-214ENST00000572579 C5orf51A6NDU8 294 aa12.67□□□□□ -0.38
CHD3-214ENST00000572579 F5H768 121 aa12.67□□□□□ -0.38
CHD3-214ENST00000572579 L7N2F9 121 aa12.67□□□□□ -0.38
CHD3-214ENST00000572579 CT45A10P0DMU9 189 aa12.67□□□□□ -0.38
CHD3-214ENST00000572579 BCAP31P51572 246 aa12.67□□□□□ -0.38
CHD3-214ENST00000572579 CAV2P51636 162 aa12.67□□□□□ -0.38
CHD3-214ENST00000572579 VAMP2P63027 116 aa12.67□□□□□ -0.38
CHD3-214ENST00000572579 BPIFA4PQ86YQ2 179 aa12.67□□□□□ -0.38
CHD3-214ENST00000572579 TMEM256Q8N2U0 113 aa12.67□□□□□ -0.38
CHD3-214ENST00000572579 C12orf45Q8N5I9 185 aaPredicted RBP12.67□□□□□ -0.38
CHD3-214ENST00000572579 ZNF586Q9NXT0 402 aa12.67□□□□□ -0.38
CHD3-214ENST00000572579 CBY3A6NI87 242 aa12.66□□□□□ -0.38
CHD3-214ENST00000572579 ZNF846Q147U1 533 aa12.66□□□□□ -0.38
CHD3-214ENST00000572579 GFI1BQ5VTD9 330 aa12.66□□□□□ -0.38
CHD3-214ENST00000572579 TMEM252Q8N6L7 170 aa12.66□□□□□ -0.38
CHD3-214ENST00000572579 SLC50A1Q9BRV3 221 aa12.66□□□□□ -0.38
CHD3-214ENST00000572579 NOP10Q9NPE3 64 aaKnown RBP12.66□□□□□ -0.38
CHD3-214ENST00000572579 PPP1R14DQ9NXH3 145 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms