RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 C8orf46Q8TAG6 207 aa12.87□□□□□ -0.35
RAB40B-206ENST00000571995 CD99P14209 185 aa12.87□□□□□ -0.35
RAB40B-206ENST00000571995 RPP21Q9H633 154 aaKnown RBP12.87□□□□□ -0.35
RAB40B-206ENST00000571995 EREGO14944 169 aa12.87□□□□□ -0.35
RAB40B-206ENST00000571995 SMAD7O15105 426 aaKnown RBP12.87□□□□□ -0.35
RAB40B-206ENST00000571995 MAJINQ3KP22 176 aa12.87□□□□□ -0.35
RAB40B-206ENST00000571995 SPENQ96T58 3664 aaKnown RBP12.86□□□□□ -0.35
RAB40B-206ENST00000571995 A0A1B0GWJ7 208 aa12.86□□□□□ -0.35
RAB40B-206ENST00000571995 IZUMO1RA6ND01 250 aa12.86□□□□□ -0.35
RAB40B-206ENST00000571995 M0R143 59 aa12.86□□□□□ -0.35
RAB40B-206ENST00000571995 BMPR1BO00238 502 aa12.86□□□□□ -0.35
RAB40B-206ENST00000571995 TCAPO15273 167 aa12.86□□□□□ -0.35
RAB40B-206ENST00000571995 NCR2O95944 276 aa12.86□□□□□ -0.35
RAB40B-206ENST00000571995 ERCC8Q13216 396 aa12.86□□□□□ -0.35
RAB40B-206ENST00000571995 LDLRAD2Q5SZI1 272 aa12.86□□□□□ -0.35
RAB40B-206ENST00000571995 REC114Q7Z4M0 266 aa12.86□□□□□ -0.35
RAB40B-206ENST00000571995 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.86□□□□□ -0.35
RAB40B-206ENST00000571995 C9JCJ5 164 aa12.86□□□□□ -0.35
RAB40B-206ENST00000571995 DYNAPQ8N1N2 210 aa12.86□□□□□ -0.35
RAB40B-206ENST00000571995 ATP6V0E1O15342 81 aa12.85□□□□□ -0.35
RAB40B-206ENST00000571995 IGKV1D-37A0A075B6S9 117 aa12.85□□□□□ -0.35
RAB40B-206ENST00000571995 SMKR1H3BMG3 65 aa12.85□□□□□ -0.35
RAB40B-206ENST00000571995 HBBP68871 147 aa12.85□□□□□ -0.35
RAB40B-206ENST00000571995 ZNF738Q8NE65 137 aa12.85□□□□□ -0.35
RAB40B-206ENST00000571995 GRAMD2BQ96HH9 432 aa12.85□□□□□ -0.35
RAB40B-206ENST00000571995 H3BUX3 64 aa12.85□□□□□ -0.35
RAB40B-206ENST00000571995 PRTN3P24158 256 aa12.85□□□□□ -0.35
RAB40B-206ENST00000571995 DEFB1P60022 68 aa12.85□□□□□ -0.35
RAB40B-206ENST00000571995 C8orf49Q96NF6 230 aa12.85□□□□□ -0.35
RAB40B-206ENST00000571995 PSG8Q9UQ74 426 aa12.85□□□□□ -0.35
RAB40B-206ENST00000571995 LINC01548A6NM66 108 aa12.84□□□□□ -0.35
RAB40B-206ENST00000571995 IGLC1P0CG04 106 aa12.84□□□□□ -0.35
RAB40B-206ENST00000571995 FCER1GP30273 86 aa12.84□□□□□ -0.35
RAB40B-206ENST00000571995 TAS2R60P59551 318 aa12.84□□□□□ -0.35
RAB40B-206ENST00000571995 POLR3KQ9Y2Y1 108 aaPredicted RBP12.84□□□□□ -0.35
RAB40B-206ENST00000571995 MT-ND6P03923 174 aa12.84□□□□□ -0.35
RAB40B-206ENST00000571995 HIST2H2BDQ6DRA6 164 aa12.84□□□□□ -0.35
RAB40B-206ENST00000571995 CUBNO60494 3623 aa12.84□□□□□ -0.35
RAB40B-206ENST00000571995 F5H697 171 aa12.84□□□□□ -0.35
RAB40B-206ENST00000571995 EFNA4P52798 201 aa12.84□□□□□ -0.35
RAB40B-206ENST00000571995 PAFAH1B2P68402 229 aa12.84□□□□□ -0.35
RAB40B-206ENST00000571995 RAI1Q7Z5J4 1906 aaPredicted RBP12.83□□□□□ -0.35
RAB40B-206ENST00000571995 FBLN7Q53RD9 439 aa12.83□□□□□ -0.36
RAB40B-206ENST00000571995 LINC00322Q6ZN03 302 aaPredicted RBP12.83□□□□□ -0.36
RAB40B-206ENST00000571995 IGSF10Q6WRI0 2623 aa12.83□□□□□ -0.36
RAB40B-206ENST00000571995 ZANQ9Y493 2812 aa12.83□□□□□ -0.36
RAB40B-206ENST00000571995 A0A1W2PPR1 153 aa12.83□□□□□ -0.36
RAB40B-206ENST00000571995 IGKV1-17P01599 117 aa12.83□□□□□ -0.36
RAB40B-206ENST00000571995 TMEM136Q6ZRR5 245 aa12.83□□□□□ -0.36
RAB40B-206ENST00000571995 OR4B1Q8NGF8 309 aa12.83□□□□□ -0.36
RAB40B-206ENST00000571995 C20orf202A1L168 122 aa12.83□□□□□ -0.36
RAB40B-206ENST00000571995 IGLV1-47P01700 117 aa12.83□□□□□ -0.36
RAB40B-206ENST00000571995 C3orf36Q3SXR2 165 aa12.83□□□□□ -0.36
RAB40B-206ENST00000571995 PYGO2Q9BRQ0 406 aa12.83□□□□□ -0.36
RAB40B-206ENST00000571995 RPL7P18124 248 aaKnown RBP12.82□□□□□ -0.36
RAB40B-206ENST00000571995 EVI2AP22794 236 aa12.82□□□□□ -0.36
RAB40B-206ENST00000571995 CKS2P33552 79 aa12.82□□□□□ -0.36
RAB40B-206ENST00000571995 ATP5IP56385 69 aaPredicted RBP12.82□□□□□ -0.36
RAB40B-206ENST00000571995 SMIM15Q7Z3B0 74 aa12.82□□□□□ -0.36
RAB40B-206ENST00000571995 TRGV9Q99603 122 aa12.82□□□□□ -0.36
RAB40B-206ENST00000571995 PTPRBP23467 1997 aa12.82□□□□□ -0.36
RAB40B-206ENST00000571995 ZNF324O75467 553 aaPredicted RBP12.82□□□□□ -0.36
RAB40B-206ENST00000571995 LEPROTL1O95214 131 aa12.82□□□□□ -0.36
RAB40B-206ENST00000571995 ARMS2P0C7Q2 107 aa12.82□□□□□ -0.36
RAB40B-206ENST00000571995 DLX6P56179 175 aa12.82□□□□□ -0.36
RAB40B-206ENST00000571995 TMEM95Q3KNT9 176 aa12.82□□□□□ -0.36
RAB40B-206ENST00000571995 PIMREGQ9BSJ6 248 aa12.82□□□□□ -0.36
RAB40B-206ENST00000571995 KAAG1Q9UBP8 84 aa12.82□□□□□ -0.36
RAB40B-206ENST00000571995 MGPP08493 103 aa12.82□□□□□ -0.36
RAB40B-206ENST00000571995 C3orf79P0CE67 100 aa12.82□□□□□ -0.36
RAB40B-206ENST00000571995 M0R381 172 aa12.81□□□□□ -0.36
RAB40B-206ENST00000571995 NIT1Q86X76 327 aa12.81□□□□□ -0.36
RAB40B-206ENST00000571995 A0A1W2PS18 150 aa12.81□□□□□ -0.36
RAB40B-206ENST00000571995 HIST1H1AQ02539 215 aaPredicted RBP12.81□□□□□ -0.36
RAB40B-206ENST00000571995 ATP5G2Q06055 141 aa12.81□□□□□ -0.36
RAB40B-206ENST00000571995 SPANXN1Q5VSR9 72 aa12.81□□□□□ -0.36
RAB40B-206ENST00000571995 TSKUQ8WUA8 353 aa12.81□□□□□ -0.36
RAB40B-206ENST00000571995 METTL26Q96S19 204 aa12.81□□□□□ -0.36
RAB40B-206ENST00000571995 GNB1LQ9BYB4 327 aa12.81□□□□□ -0.36
RAB40B-206ENST00000571995 PRSS1P07477 247 aa12.81□□□□□ -0.36
RAB40B-206ENST00000571995 RIGQ13278 110 aa12.81□□□□□ -0.36
RAB40B-206ENST00000571995 ZNF841Q6ZN19 808 aa12.81□□□□□ -0.36
RAB40B-206ENST00000571995 TMEM116Q8NCL8 245 aa12.81□□□□□ -0.36
RAB40B-206ENST00000571995 TP73-AS1Q9UF72 201 aa12.81□□□□□ -0.36
RAB40B-206ENST00000571995 TMEM213A2RRL7 107 aa12.8□□□□□ -0.36
RAB40B-206ENST00000571995 APOHP02749 345 aaPredicted RBP12.8□□□□□ -0.36
RAB40B-206ENST00000571995 AARDQ4LEZ3 155 aa12.8□□□□□ -0.36
RAB40B-206ENST00000571995 TMEM78Q5T7P6 136 aa12.8□□□□□ -0.36
RAB40B-206ENST00000571995 C11orf52Q96A22 123 aa12.8□□□□□ -0.36
RAB40B-206ENST00000571995 NCOR1P1Q9H4R4 102 aa12.8□□□□□ -0.36
RAB40B-206ENST00000571995 TEX22C9J3V5 150 aa12.79□□□□□ -0.36
RAB40B-206ENST00000571995 GPX1P07203 203 aa12.79□□□□□ -0.36
RAB40B-206ENST00000571995 HAX1O00165 279 aa12.79□□□□□ -0.36
RAB40B-206ENST00000571995 TYMSP04818 313 aa12.79□□□□□ -0.36
RAB40B-206ENST00000571995 LINC00311Q8N616 119 aa12.79□□□□□ -0.36
RAB40B-206ENST00000571995 TNFRSF14Q92956 283 aa12.79□□□□□ -0.36
RAB40B-206ENST00000571995 NDUFAF3Q9BU61 184 aa12.79□□□□□ -0.36
RAB40B-206ENST00000571995 A0A1B0GUT8 65 aa12.79□□□□□ -0.36
RAB40B-206ENST00000571995 CBY3A6NI87 242 aa12.79□□□□□ -0.36
RAB40B-206ENST00000571995 K7EIM0 57 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms