RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 PFDN1O60925 122 aa9.84□□□□□ -0.83
CCDC40-205ENST00000571028 PRB4P10163 310 aaPredicted RBP9.84□□□□□ -0.83
CCDC40-205ENST00000571028 RAB2AP61019 212 aa9.84□□□□□ -0.83
CCDC40-205ENST00000571028 ACOT6Q3I5F7 207 aaPredicted RBP9.84□□□□□ -0.83
CCDC40-205ENST00000571028 IGFL4Q6B9Z1 124 aa9.84□□□□□ -0.83
CCDC40-205ENST00000571028 FAM122CQ6P4D5 195 aa9.84□□□□□ -0.83
CCDC40-205ENST00000571028 C16orf92Q96LL3 132 aa9.84□□□□□ -0.83
CCDC40-205ENST00000571028 SEPSECSQ9HD40 501 aaKnown RBP9.84□□□□□ -0.83
CCDC40-205ENST00000571028 TRAV2A0A0B4J234 112 aa9.83□□□□□ -0.84
CCDC40-205ENST00000571028 A0A0D9SG52 128 aa9.83□□□□□ -0.84
CCDC40-205ENST00000571028 KANTRA0A1W2PQU2 76 aa9.83□□□□□ -0.84
CCDC40-205ENST00000571028 KNCNA6PVL3 124 aa9.83□□□□□ -0.84
CCDC40-205ENST00000571028 RPL35AP18077 110 aaKnown RBP9.83□□□□□ -0.84
CCDC40-205ENST00000571028 ID1P41134 155 aa9.83□□□□□ -0.84
CCDC40-205ENST00000571028 CMC4P56277 68 aaPredicted RBP9.83□□□□□ -0.84
CCDC40-205ENST00000571028 SNRPD3P62318 126 aaKnown RBP9.83□□□□□ -0.84
CCDC40-205ENST00000571028 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.83□□□□□ -0.84
CCDC40-205ENST00000571028 TMUB2Q71RG4 321 aa9.83□□□□□ -0.84
CCDC40-205ENST00000571028 BPIFA4PQ86YQ2 179 aa9.83□□□□□ -0.84
CCDC40-205ENST00000571028 RPP25LQ8N5L8 163 aaKnown RBP9.83□□□□□ -0.84
CCDC40-205ENST00000571028 C17orf77Q96MU5 243 aa9.83□□□□□ -0.84
CCDC40-205ENST00000571028 ZNF471Q9BX82 626 aaPredicted RBP9.83□□□□□ -0.84
CCDC40-205ENST00000571028 CYTL1Q9NRR1 136 aa9.83□□□□□ -0.84
CCDC40-205ENST00000571028 RNF24Q9Y225 148 aa9.83□□□□□ -0.84
CCDC40-205ENST00000571028 TIMM9Q9Y5J7 89 aa9.83□□□□□ -0.84
CCDC40-205ENST00000571028 A0A1W2PPV4 95 aa9.82□□□□□ -0.84
CCDC40-205ENST00000571028 C1QBP02746 253 aa9.82□□□□□ -0.84
CCDC40-205ENST00000571028 PYYP10082 97 aa9.82□□□□□ -0.84
CCDC40-205ENST00000571028 DEFB1P60022 68 aa9.82□□□□□ -0.84
CCDC40-205ENST00000571028 ZNF345Q14585 488 aa9.82□□□□□ -0.84
CCDC40-205ENST00000571028 ZFP69Q49AA0 526 aa9.82□□□□□ -0.84
CCDC40-205ENST00000571028 OR10G4Q8NGN3 311 aa9.82□□□□□ -0.84
CCDC40-205ENST00000571028 OR10G9Q8NGN4 311 aa9.82□□□□□ -0.84
CCDC40-205ENST00000571028 OR10G7Q8NGN6 311 aa9.82□□□□□ -0.84
CCDC40-205ENST00000571028 OR2G3Q8NGZ4 309 aa9.82□□□□□ -0.84
CCDC40-205ENST00000571028 GNPNAT1Q96EK6 184 aaPredicted RBP9.82□□□□□ -0.84
CCDC40-205ENST00000571028 SLC25A2Q9BXI2 301 aa9.82□□□□□ -0.84
CCDC40-205ENST00000571028 FUT9Q9Y231 359 aa9.82□□□□□ -0.84
CCDC40-205ENST00000571028 HMGB3O15347 200 aaKnown RBP9.81□□□□□ -0.84
CCDC40-205ENST00000571028 BCL2L11O43521 198 aa9.81□□□□□ -0.84
CCDC40-205ENST00000571028 OR10J4P0C629 311 aa9.81□□□□□ -0.84
CCDC40-205ENST00000571028 M6PRP20645 277 aa9.81□□□□□ -0.84
CCDC40-205ENST00000571028 HLA-DMBP28068 263 aa9.81□□□□□ -0.84
CCDC40-205ENST00000571028 MEOX2P50222 304 aa9.81□□□□□ -0.84
CCDC40-205ENST00000571028 RHOBP62745 196 aa9.81□□□□□ -0.84
CCDC40-205ENST00000571028 ACTL10Q5JWF8 245 aa9.81□□□□□ -0.84
CCDC40-205ENST00000571028 RNF182Q8N6D2 247 aa9.81□□□□□ -0.84
CCDC40-205ENST00000571028 BLNKQ8WV28 456 aa9.81□□□□□ -0.84
CCDC40-205ENST00000571028 MRPL32Q9BYC8 188 aaKnown RBP9.81□□□□□ -0.84
CCDC40-205ENST00000571028 H3BQ15 152 aa9.8□□□□□ -0.84
CCDC40-205ENST00000571028 SOCS3O14543 225 aa9.8□□□□□ -0.84
CCDC40-205ENST00000571028 MRPS12O15235 138 aaKnown RBP9.8□□□□□ -0.84
CCDC40-205ENST00000571028 OR7C2O60412 319 aa9.8□□□□□ -0.84
CCDC40-205ENST00000571028 NKX2-5P52952 324 aaPredicted RBP9.8□□□□□ -0.84
CCDC40-205ENST00000571028 LGALSLQ3ZCW2 172 aaPredicted RBP9.8□□□□□ -0.84
CCDC40-205ENST00000571028 C20orf173Q96LM9 149 aa9.8□□□□□ -0.84
CCDC40-205ENST00000571028 HYLS1Q96M11 299 aa9.8□□□□□ -0.84
CCDC40-205ENST00000571028 PSMG3Q9BT73 122 aaPredicted RBP9.8□□□□□ -0.84
CCDC40-205ENST00000571028 PAXXQ9BUH6 204 aa9.8□□□□□ -0.84
CCDC40-205ENST00000571028 OR51M1Q9H341 326 aa9.8□□□□□ -0.84
CCDC40-205ENST00000571028 KLK5Q9Y337 293 aaPredicted RBP9.8□□□□□ -0.84
CCDC40-205ENST00000571028 A0A087X0K7 114 aa9.79□□□□□ -0.84
CCDC40-205ENST00000571028 LOC102724200A0A096LPH7 203 aaPredicted RBP9.79□□□□□ -0.84
CCDC40-205ENST00000571028 ISLRO14498 428 aa9.79□□□□□ -0.84
CCDC40-205ENST00000571028 IGKV3-20P01619 116 aa9.79□□□□□ -0.84
CCDC40-205ENST00000571028 PSMB3P49720 205 aa9.79□□□□□ -0.84
CCDC40-205ENST00000571028 LINC00322Q6ZN03 302 aaPredicted RBP9.79□□□□□ -0.84
CCDC40-205ENST00000571028 STHQ8IWL8 128 aa9.79□□□□□ -0.84
CCDC40-205ENST00000571028 ZNF738Q8NE65 137 aa9.79□□□□□ -0.84
CCDC40-205ENST00000571028 FAM167A-AS1Q96KT0 104 aa9.79□□□□□ -0.84
CCDC40-205ENST00000571028 ZNF586Q9NXT0 402 aa9.79□□□□□ -0.84
CCDC40-205ENST00000571028 TRAV8-2A0A0B4J237 113 aa9.78□□□□□ -0.84
CCDC40-205ENST00000571028 F6UB75 175 aa9.78□□□□□ -0.84
CCDC40-205ENST00000571028 SLC17A3O00476 420 aa9.78□□□□□ -0.84
CCDC40-205ENST00000571028 IGLC2P0DOY2 106 aa9.78□□□□□ -0.84
CCDC40-205ENST00000571028 HIST1H1EP10412 219 aaKnown RBP9.78□□□□□ -0.84
CCDC40-205ENST00000571028 CDC34P49427 236 aaPredicted RBP9.78□□□□□ -0.84
CCDC40-205ENST00000571028 TAS2R45P59539 299 aa9.78□□□□□ -0.84
CCDC40-205ENST00000571028 SERF2P84101 59 aa9.78□□□□□ -0.84
CCDC40-205ENST00000571028 TMEM41BQ5BJD5 291 aa9.78□□□□□ -0.84
CCDC40-205ENST00000571028 AKR1C8PQ5T2L2 129 aa9.78□□□□□ -0.84
CCDC40-205ENST00000571028 TMEM14CQ9P0S9 112 aa9.78□□□□□ -0.84
CCDC40-205ENST00000571028 MBP02144 154 aa9.77□□□□□ -0.85
CCDC40-205ENST00000571028 ZNF705DP0CH99 300 aaPredicted RBP9.77□□□□□ -0.85
CCDC40-205ENST00000571028 ZNF705BP0CI00 300 aaPredicted RBP9.77□□□□□ -0.85
CCDC40-205ENST00000571028 SPP1P10451 314 aa9.77□□□□□ -0.85
CCDC40-205ENST00000571028 EIF5AP63241 154 aaKnown RBP9.77□□□□□ -0.85
CCDC40-205ENST00000571028 UBE2L3P68036 154 aaKnown RBP9.77□□□□□ -0.85
CCDC40-205ENST00000571028 KHDC3LQ587J8 217 aa9.77□□□□□ -0.85
CCDC40-205ENST00000571028 SAMD13Q5VXD3 122 aa9.77□□□□□ -0.85
CCDC40-205ENST00000571028 EBLN2Q6P2I7 272 aa9.77□□□□□ -0.85
CCDC40-205ENST00000571028 CEMP1Q6PRD7 247 aaPredicted RBP9.77□□□□□ -0.85
CCDC40-205ENST00000571028 LCN15Q6UWW0 184 aa9.77□□□□□ -0.85
CCDC40-205ENST00000571028 IQCF2Q8IXL9 164 aa9.77□□□□□ -0.85
CCDC40-205ENST00000571028 OR4B1Q8NGF8 309 aa9.77□□□□□ -0.85
CCDC40-205ENST00000571028 RNF141Q8WVD5 230 aa9.77□□□□□ -0.85
CCDC40-205ENST00000571028 HRH4Q9H3N8 390 aa9.77□□□□□ -0.85
CCDC40-205ENST00000571028 ZNF331Q9NQX6 463 aaPredicted RBP9.77□□□□□ -0.85
CCDC40-205ENST00000571028 RPRMQ9NS64 109 aa9.77□□□□□ -0.85
CCDC40-205ENST00000571028 TRBV19A0A075B6N1 114 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms