RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 PGPA6NDG6 321 aa15.4■□□□□ 0.06
SPNS2-203ENST00000570979 IGKV1-17P01599 117 aa15.4■□□□□ 0.06
SPNS2-203ENST00000570979 GP9P14770 177 aa15.4■□□□□ 0.06
SPNS2-203ENST00000570979 HNF1AP20823 631 aa15.4■□□□□ 0.06
SPNS2-203ENST00000570979 RPL15P61313 204 aaKnown RBP15.4■□□□□ 0.06
SPNS2-203ENST00000570979 OR4F17Q8NGA8 305 aa15.4■□□□□ 0.06
SPNS2-203ENST00000570979 FBN1P35555 2871 aaKnown RBP15.4■□□□□ 0.06
SPNS2-203ENST00000570979 SCGB1D1O95968 90 aa15.39■□□□□ 0.05
SPNS2-203ENST00000570979 MGST1P10620 155 aaKnown RBP15.39■□□□□ 0.05
SPNS2-203ENST00000570979 FCGR2BP31994 310 aaPredicted RBP15.39■□□□□ 0.05
SPNS2-203ENST00000570979 RBX1P62877 108 aa15.39■□□□□ 0.05
SPNS2-203ENST00000570979 ORAOV1Q8WV07 137 aa15.39■□□□□ 0.05
SPNS2-203ENST00000570979 SHANK2-AS3Q9BTD1 123 aa15.39■□□□□ 0.05
SPNS2-203ENST00000570979 PLXNB1O43157 2135 aa15.39■□□□□ 0.05
SPNS2-203ENST00000570979 IGHV3-21A0A0B4J1V1 117 aa15.39■□□□□ 0.05
SPNS2-203ENST00000570979 NPFFO15130 113 aa15.39■□□□□ 0.05
SPNS2-203ENST00000570979 PAFAH1B2P68402 229 aa15.39■□□□□ 0.05
SPNS2-203ENST00000570979 DMRTA1Q5VZB9 504 aa15.39■□□□□ 0.05
SPNS2-203ENST00000570979 VN1R17PQ8TDU5 208 aa15.39■□□□□ 0.05
SPNS2-203ENST00000570979 ESDP10768 282 aa15.38■□□□□ 0.05
SPNS2-203ENST00000570979 KLK9Q2XQG4 91 aa15.38■□□□□ 0.05
SPNS2-203ENST00000570979 RASL11AQ6T310 242 aa15.38■□□□□ 0.05
SPNS2-203ENST00000570979 CMTM2Q8TAZ6 248 aa15.38■□□□□ 0.05
SPNS2-203ENST00000570979 RNF125Q96EQ8 232 aa15.38■□□□□ 0.05
SPNS2-203ENST00000570979 GPR82Q96P67 336 aa15.38■□□□□ 0.05
SPNS2-203ENST00000570979 GNB1LQ9BYB4 327 aa15.38■□□□□ 0.05
SPNS2-203ENST00000570979 C21orf62Q9NYP8 219 aa15.38■□□□□ 0.05
SPNS2-203ENST00000570979 KLK9Q9UKQ9 250 aa15.38■□□□□ 0.05
SPNS2-203ENST00000570979 WI2-2373I1.2A0A1W2PRP0 233 aa15.37■□□□□ 0.05
SPNS2-203ENST00000570979 K7EQM0 130 aa15.37■□□□□ 0.05
SPNS2-203ENST00000570979 IGLV2-8P01709 118 aa15.37■□□□□ 0.05
SPNS2-203ENST00000570979 PAX8Q06710 450 aa15.37■□□□□ 0.05
SPNS2-203ENST00000570979 DYNAPQ8N1N2 210 aa15.37■□□□□ 0.05
SPNS2-203ENST00000570979 OR2D3Q8NGH3 330 aa15.37■□□□□ 0.05
SPNS2-203ENST00000570979 BLNKQ8WV28 456 aa15.37■□□□□ 0.05
SPNS2-203ENST00000570979 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.37■□□□□ 0.05
SPNS2-203ENST00000570979 ATRQ13535 2644 aa15.37■□□□□ 0.05
SPNS2-203ENST00000570979 CD24P25063 80 aa15.36■□□□□ 0.05
SPNS2-203ENST00000570979 SAA4P35542 130 aa15.36■□□□□ 0.05
SPNS2-203ENST00000570979 OR5I1Q13606 314 aa15.36■□□□□ 0.05
SPNS2-203ENST00000570979 ZNF705AQ6ZN79 300 aaPredicted RBP15.36■□□□□ 0.05
SPNS2-203ENST00000570979 Q8N9W7 124 aa15.36■□□□□ 0.05
SPNS2-203ENST00000570979 FANCD2OSQ96PS1 177 aa15.36■□□□□ 0.05
SPNS2-203ENST00000570979 Q9H3A6 140 aa15.36■□□□□ 0.05
SPNS2-203ENST00000570979 TRBV6-1A0A0K0K1D8 114 aa15.36■□□□□ 0.05
SPNS2-203ENST00000570979 SMIM27A0A1W2PRY6 76 aa15.36■□□□□ 0.05
SPNS2-203ENST00000570979 H3BRN7 92 aa15.36■□□□□ 0.05
SPNS2-203ENST00000570979 LEMD1Q68G75 181 aa15.36■□□□□ 0.05
SPNS2-203ENST00000570979 C19orf35Q6ZS72 473 aa15.36■□□□□ 0.05
SPNS2-203ENST00000570979 ZNF491Q8N8L2 437 aa15.36■□□□□ 0.05
SPNS2-203ENST00000570979 FAM110DQ8TAY7 271 aaPredicted RBP15.36■□□□□ 0.05
SPNS2-203ENST00000570979 GRAMD2BQ96HH9 432 aa15.36■□□□□ 0.05
SPNS2-203ENST00000570979 MS4A10Q96PG2 267 aa15.36■□□□□ 0.05
SPNS2-203ENST00000570979 IGHV7-81A0A0B4J1V7 117 aa15.35■□□□□ 0.05
SPNS2-203ENST00000570979 SLC17A3O00476 420 aa15.35■□□□□ 0.05
SPNS2-203ENST00000570979 PDE6HQ13956 83 aa15.35■□□□□ 0.05
SPNS2-203ENST00000570979 Q56UQ5 140 aa15.35■□□□□ 0.05
SPNS2-203ENST00000570979 FAM103A1Q9BTL3 118 aaKnown RBP15.35■□□□□ 0.05
SPNS2-203ENST00000570979 SERTAD4Q9NUC0 356 aa15.35■□□□□ 0.05
SPNS2-203ENST00000570979 SVEP1Q4LDE5 3571 aa15.35■□□□□ 0.05
SPNS2-203ENST00000570979 RAB9AP51151 201 aa15.34■□□□□ 0.05
SPNS2-203ENST00000570979 ASPHD1Q5U4P2 390 aa15.34■□□□□ 0.05
SPNS2-203ENST00000570979 RUSC1-AS1Q66K80 236 aa15.34■□□□□ 0.05
SPNS2-203ENST00000570979 ATP6V0BQ99437 205 aa15.34■□□□□ 0.05
SPNS2-203ENST00000570979 TCRAP04437 139 aa15.34■□□□□ 0.05
SPNS2-203ENST00000570979 IL4P05112 153 aa15.34■□□□□ 0.05
SPNS2-203ENST00000570979 ARHGAP32A7KAX9 2087 aa15.33■□□□□ 0.05
SPNS2-203ENST00000570979 SERTM2A0A1B0GWG4 89 aa15.33■□□□□ 0.04
SPNS2-203ENST00000570979 C20orf202A1L168 122 aa15.33■□□□□ 0.04
SPNS2-203ENST00000570979 IZUMO1RA6ND01 250 aa15.33■□□□□ 0.04
SPNS2-203ENST00000570979 PPBPP02775 128 aa15.33■□□□□ 0.04
SPNS2-203ENST00000570979 RPS20P60866 119 aaKnown RBP15.33■□□□□ 0.04
SPNS2-203ENST00000570979 OR4B1Q8NGF8 309 aa15.33■□□□□ 0.04
SPNS2-203ENST00000570979 TMEM160Q9NX00 188 aa15.33■□□□□ 0.04
SPNS2-203ENST00000570979 ZNF492Q9P255 531 aa15.33■□□□□ 0.04
SPNS2-203ENST00000570979 CENPVL3A0A0U1RRI6 287 aa15.32■□□□□ 0.04
SPNS2-203ENST00000570979 FBLL1A6NHQ2 334 aaKnown RBP15.32■□□□□ 0.04
SPNS2-203ENST00000570979 CT83Q5H943 113 aa15.32■□□□□ 0.04
SPNS2-203ENST00000570979 IL17RELQ6ZVW7 336 aa15.32■□□□□ 0.04
SPNS2-203ENST00000570979 OR8I2Q8N0Y5 310 aa15.32■□□□□ 0.04
SPNS2-203ENST00000570979 RNASE7Q9H1E1 156 aaKnown RBP15.32■□□□□ 0.04
SPNS2-203ENST00000570979 COL6A5A8TX70 2615 aa15.32■□□□□ 0.04
SPNS2-203ENST00000570979 NDUFB8O95169 186 aa15.31■□□□□ 0.04
SPNS2-203ENST00000570979 HLA-DQA1P01909 254 aa15.31■□□□□ 0.04
SPNS2-203ENST00000570979 TPPP2P59282 170 aa15.31■□□□□ 0.04
SPNS2-203ENST00000570979 ZNF331Q9NQX6 463 aaPredicted RBP15.31■□□□□ 0.04
SPNS2-203ENST00000570979 NAT8BQ9UHF3 227 aa15.31■□□□□ 0.04
SPNS2-203ENST00000570979 FBXL7Q9UJT9 491 aa15.31■□□□□ 0.04
SPNS2-203ENST00000570979 TRBV19A0A075B6N1 114 aa15.31■□□□□ 0.04
SPNS2-203ENST00000570979 IGHV1-69DA0A0B4J2H0 117 aa15.31■□□□□ 0.04
SPNS2-203ENST00000570979 LTAP01374 205 aa15.31■□□□□ 0.04
SPNS2-203ENST00000570979 IGHV1-69P01742 117 aa15.31■□□□□ 0.04
SPNS2-203ENST00000570979 RPL7P18124 248 aaKnown RBP15.31■□□□□ 0.04
SPNS2-203ENST00000570979 PSG9Q00887 426 aa15.31■□□□□ 0.04
SPNS2-203ENST00000570979 UNQ5815/PRO19632Q6UWF5 114 aa15.31■□□□□ 0.04
SPNS2-203ENST00000570979 DAZAP1Q96EP5 407 aaKnown RBP15.31■□□□□ 0.04
SPNS2-203ENST00000570979 AJUBAQ96IF1 538 aa15.31■□□□□ 0.04
SPNS2-203ENST00000570979 MRPL18Q9H0U6 180 aaKnown RBP15.31■□□□□ 0.04
SPNS2-203ENST00000570979 AAMDCQ9H7C9 122 aa15.31■□□□□ 0.04
SPNS2-203ENST00000570979 ZNF705FA8MVS1 300 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms