RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 Q56UQ5 140 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 ETFRF1Q6IPR1 90 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 CD164L2Q6UWJ8 174 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 CLEC19AQ6UXS0 136 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 TMED4Q7Z7H5 227 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 CENPSQ8N2Z9 138 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 UBAC2Q8NBM4 344 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 DUSP18Q8NEJ0 188 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 OR2K2Q8NGT1 345 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 COQ8AQ8NI60 647 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 ZNF502Q8TBZ5 544 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 DYNLRB2Q8TF09 96 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 GLYATL2Q8WU03 294 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 MARC2Q969Z3 335 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 PINX1Q96BK5 328 aaKnown RBP2.79□□□□□ -1.96
NUP88-202ENST00000570937 SRRQ9GZT4 340 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 Q9HAA7 133 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 C21orf62Q9NYP8 219 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 SHPKQ9UHJ6 478 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 UFC1Q9Y3C8 167 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 TMEM56-RWDD3S4R434 201 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 U3KQ87 197 aa2.79□□□□□ -1.96
NUP88-202ENST00000570937 TRAV30A0A087WSZ9 112 aa2.78□□□□□ -1.96
NUP88-202ENST00000570937 A0A1B0GW64 132 aa2.78□□□□□ -1.96
NUP88-202ENST00000570937 OR2T8A6NH00 312 aa2.78□□□□□ -1.96
NUP88-202ENST00000570937 PPP5D1E7EU14 171 aa2.78□□□□□ -1.96
NUP88-202ENST00000570937 K7EMT4 169 aa2.78□□□□□ -1.96
NUP88-202ENST00000570937 NDUFA4O00483 81 aa2.78□□□□□ -1.96
NUP88-202ENST00000570937 TGOLN2O43493 480 aa2.78□□□□□ -1.96
NUP88-202ENST00000570937 GNG7O60262 68 aa2.78□□□□□ -1.96
NUP88-202ENST00000570937 MED6O75586 246 aa2.78□□□□□ -1.96
NUP88-202ENST00000570937 YIF1AO95070 293 aa2.78□□□□□ -1.96
NUP88-202ENST00000570937 NDUFB6O95139 128 aa2.78□□□□□ -1.96
NUP88-202ENST00000570937 IFNA10P01566 189 aa2.78□□□□□ -1.96
NUP88-202ENST00000570937 IGKV1-5P01602 117 aa2.78□□□□□ -1.96
NUP88-202ENST00000570937 IGLV1-51P01701 117 aa2.78□□□□□ -1.96
NUP88-202ENST00000570937 PRB2P02812 416 aaPredicted RBP2.78□□□□□ -1.96
NUP88-202ENST00000570937 FABP1P07148 127 aa2.78□□□□□ -1.96
NUP88-202ENST00000570937 SLC25A4P12235 298 aa2.78□□□□□ -1.96
NUP88-202ENST00000570937 SLC25A6P12236 298 aa2.78□□□□□ -1.96
NUP88-202ENST00000570937 CBLN1P23435 193 aa2.78□□□□□ -1.96
NUP88-202ENST00000570937 CMC4P56277 68 aaPredicted RBP2.78□□□□□ -1.96
NUP88-202ENST00000570937 RAB11AP62491 216 aa2.78□□□□□ -1.96
NUP88-202ENST00000570937 SMCO1Q147U7 214 aa2.78□□□□□ -1.96
NUP88-202ENST00000570937 NMSQ5H8A3 153 aa2.78□□□□□ -1.96
NUP88-202ENST00000570937 LAMTOR1Q6IAA8 161 aa2.78□□□□□ -1.96
NUP88-202ENST00000570937 SLC16A13Q7RTY0 426 aa2.78□□□□□ -1.96
NUP88-202ENST00000570937 SELENOHQ8IZQ5 122 aaKnown RBP2.78□□□□□ -1.96
NUP88-202ENST00000570937 OR1S1Q8NH92 325 aa2.78□□□□□ -1.96
NUP88-202ENST00000570937 LHFPL5Q8TAF8 219 aa2.78□□□□□ -1.96
NUP88-202ENST00000570937 RNASEH2CQ8TDP1 164 aaKnown RBP2.78□□□□□ -1.96
NUP88-202ENST00000570937 PHYHIPLQ96FC7 376 aa2.78□□□□□ -1.96
NUP88-202ENST00000570937 NARS2Q96I59 477 aaKnown RBP2.78□□□□□ -1.96
NUP88-202ENST00000570937 CIB3Q96Q77 187 aaPredicted RBP2.78□□□□□ -1.96
NUP88-202ENST00000570937 GINS3Q9BRX5 216 aa2.78□□□□□ -1.96
NUP88-202ENST00000570937 CCDC32Q9BV29 185 aa2.78□□□□□ -1.96
NUP88-202ENST00000570937 TUBA4BQ9H853 241 aa2.78□□□□□ -1.96
NUP88-202ENST00000570937 DAZ1Q9NQZ3 744 aaKnown RBP2.78□□□□□ -1.96
NUP88-202ENST00000570937 MRPL27Q9P0M9 148 aaKnown RBP2.78□□□□□ -1.96
NUP88-202ENST00000570937 PLXNB1O43157 2135 aa2.78□□□□□ -1.96
NUP88-202ENST00000570937 TRRAPQ9Y4A5 3859 aa2.78□□□□□ -1.96
NUP88-202ENST00000570937 WNK1Q9H4A3 2382 aa2.78□□□□□ -1.97
NUP88-202ENST00000570937 TRAV14DV4A0A0A6YYC5 116 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 TRAV25A0A0B4J276 109 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 FAM240BA0A1B0GVZ2 78 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 WI2-2373I1.2A0A1W2PRP0 233 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 A4D1N5 150 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 MFSD2BA6NFX1 497 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 C2orf70A6NJV1 201 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 A8MWP6 167 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 I3L2K1 104 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 K7EIL1 84 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 K7EIM0 57 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 WRBO00258 174 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 SFT2D2O95562 160 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 MT-CO2P00403 227 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 TRBV12-3P01733 135 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 IGHV3-23P01764 117 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 HLA-AP01891 365 aaKnown RBP2.77□□□□□ -1.97
NUP88-202ENST00000570937 IFNA4P05014 189 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 CTSGP08311 255 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 OR4E1P0C645 316 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 P0C879 139 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 IL7P13232 177 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 SPNP16150 400 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 S100A7P31151 101 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 OPRK1P41145 380 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 EIF2B2P49770 351 aaKnown RBP2.77□□□□□ -1.97
NUP88-202ENST00000570937 AP2S1P53680 142 aaPredicted RBP2.77□□□□□ -1.97
NUP88-202ENST00000570937 RAB4BP61018 213 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 SUPT4H1P63272 117 aaKnown RBP2.77□□□□□ -1.97
NUP88-202ENST00000570937 PAFAH1B2P68402 229 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 TNFRSF9Q07011 255 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 ZNF846Q147U1 533 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 GUCA2BQ16661 112 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 DEFB114Q30KQ6 69 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 C2orf83Q53S99 150 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 IL34Q6ZMJ4 242 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 LYZL2Q7Z4W2 148 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 LINC00518Q8N0U6 118 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms