RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 TEPPQ6URK8 271 aa8.88□□□□□ -0.99
CTDNEP1-205ENST00000570828 NPVFQ9HCQ7 196 aa8.88□□□□□ -0.99
CTDNEP1-205ENST00000570828 RCL1Q9Y2P8 373 aaKnown RBP8.88□□□□□ -0.99
CTDNEP1-205ENST00000570828 VPS13DQ5THJ4 4388 aa8.88□□□□□ -0.99
CTDNEP1-205ENST00000570828 TRAV6A0A075B6T7 132 aa8.87□□□□□ -0.99
CTDNEP1-205ENST00000570828 TEX48A0A1B0GUV7 120 aa8.87□□□□□ -0.99
CTDNEP1-205ENST00000570828 FAM25EA8MYX2 175 aa8.87□□□□□ -0.99
CTDNEP1-205ENST00000570828 L7N2F9 121 aa8.87□□□□□ -0.99
CTDNEP1-205ENST00000570828 CCSO14618 274 aa8.87□□□□□ -0.99
CTDNEP1-205ENST00000570828 PLA2G10O15496 165 aa8.87□□□□□ -0.99
CTDNEP1-205ENST00000570828 DUSP14O95147 198 aaKnown RBP8.87□□□□□ -0.99
CTDNEP1-205ENST00000570828 HBE1P02100 147 aa8.87□□□□□ -0.99
CTDNEP1-205ENST00000570828 MBPP02686 304 aaPredicted RBP8.87□□□□□ -0.99
CTDNEP1-205ENST00000570828 AMBPP02760 352 aa8.87□□□□□ -0.99
CTDNEP1-205ENST00000570828 PLP1P60201 277 aa8.87□□□□□ -0.99
CTDNEP1-205ENST00000570828 VAMP2P63027 116 aa8.87□□□□□ -0.99
CTDNEP1-205ENST00000570828 SLC38A11Q08AI6 406 aa8.87□□□□□ -0.99
CTDNEP1-205ENST00000570828 ZNF546Q86UE3 836 aa8.87□□□□□ -0.99
CTDNEP1-205ENST00000570828 C17orf77Q96MU5 243 aa8.87□□□□□ -0.99
CTDNEP1-205ENST00000570828 UHRF2Q96PU4 802 aa8.87□□□□□ -0.99
CTDNEP1-205ENST00000570828 TMEM208Q9BTX3 173 aa8.87□□□□□ -0.99
CTDNEP1-205ENST00000570828 ARL6Q9H0F7 186 aa8.87□□□□□ -0.99
CTDNEP1-205ENST00000570828 NUDT15Q9NV35 164 aa8.87□□□□□ -0.99
CTDNEP1-205ENST00000570828 RNF24Q9Y225 148 aa8.87□□□□□ -0.99
CTDNEP1-205ENST00000570828 FRAS1Q86XX4 4008 aa8.86□□□□□ -0.99
CTDNEP1-205ENST00000570828 C7orf66A4D0T2 115 aa8.86□□□□□ -0.99
CTDNEP1-205ENST00000570828 K7EPK0 472 aa8.86□□□□□ -0.99
CTDNEP1-205ENST00000570828 TCRBP04435 133 aa8.86□□□□□ -0.99
CTDNEP1-205ENST00000570828 CNN1P51911 297 aaKnown RBP8.86□□□□□ -0.99
CTDNEP1-205ENST00000570828 TOR2AQ5JU69 321 aa8.86□□□□□ -0.99
CTDNEP1-205ENST00000570828 IGFL4Q6B9Z1 124 aa8.86□□□□□ -0.99
CTDNEP1-205ENST00000570828 RNF182Q8N6D2 247 aa8.86□□□□□ -0.99
CTDNEP1-205ENST00000570828 ZNF738Q8NE65 137 aa8.86□□□□□ -0.99
CTDNEP1-205ENST00000570828 CCDC32Q9BV29 185 aa8.86□□□□□ -0.99
CTDNEP1-205ENST00000570828 GGACTQ9BVM4 153 aa8.86□□□□□ -0.99
CTDNEP1-205ENST00000570828 TRAV8-2A0A0B4J237 113 aa8.85□□□□□ -0.99
CTDNEP1-205ENST00000570828 LOC102723971A0A1B0GUV8 181 aa8.85□□□□□ -0.99
CTDNEP1-205ENST00000570828 C5orf51A6NDU8 294 aa8.85□□□□□ -0.99
CTDNEP1-205ENST00000570828 A8MTW9 85 aa8.85□□□□□ -0.99
CTDNEP1-205ENST00000570828 GOSR2O14653 212 aa8.85□□□□□ -0.99
CTDNEP1-205ENST00000570828 INSP01308 110 aa8.85□□□□□ -0.99
CTDNEP1-205ENST00000570828 BCAP31P51572 246 aa8.85□□□□□ -0.99
CTDNEP1-205ENST00000570828 CAV2P51636 162 aa8.85□□□□□ -0.99
CTDNEP1-205ENST00000570828 RRN3P1Q2M238 152 aa8.85□□□□□ -0.99
CTDNEP1-205ENST00000570828 PXDC1Q5TGL8 231 aa8.85□□□□□ -0.99
CTDNEP1-205ENST00000570828 LRRC20Q8TCA0 184 aa8.85□□□□□ -0.99
CTDNEP1-205ENST00000570828 ZNF431Q8TF32 576 aaPredicted RBP8.85□□□□□ -0.99
CTDNEP1-205ENST00000570828 IGF2BP2-AS1Q96M15 143 aa8.85□□□□□ -0.99
CTDNEP1-205ENST00000570828 NDUFAF3Q9BU61 184 aa8.85□□□□□ -0.99
CTDNEP1-205ENST00000570828 ARV1Q9H2C2 271 aa8.85□□□□□ -0.99
CTDNEP1-205ENST00000570828 LSM5Q9Y4Y9 91 aaKnown RBP8.85□□□□□ -0.99
CTDNEP1-205ENST00000570828 A0A087X0K7 114 aa8.84□□□□□ -0.99
CTDNEP1-205ENST00000570828 AGPAT2O15120 278 aa8.84□□□□□ -0.99
CTDNEP1-205ENST00000570828 COX7A2P2O60397 106 aa8.84□□□□□ -0.99
CTDNEP1-205ENST00000570828 ARL16Q0P5N6 197 aa8.84□□□□□ -0.99
CTDNEP1-205ENST00000570828 SPINK13Q1W4C9 94 aa8.84□□□□□ -0.99
CTDNEP1-205ENST00000570828 FAM222AQ5U5X8 452 aa8.84□□□□□ -0.99
CTDNEP1-205ENST00000570828 AMTNQ6UX39 209 aa8.84□□□□□ -0.99
CTDNEP1-205ENST00000570828 C1orf158Q8N1D5 194 aa8.84□□□□□ -0.99
CTDNEP1-205ENST00000570828 OR11H7Q8NGC8 314 aa8.84□□□□□ -0.99
CTDNEP1-205ENST00000570828 SEC22CQ9BRL7 303 aa8.84□□□□□ -0.99
CTDNEP1-205ENST00000570828 NIPSNAP3BQ9BS92 247 aa8.84□□□□□ -0.99
CTDNEP1-205ENST00000570828 KRTAP4-5Q9BYR2 181 aa8.84□□□□□ -0.99
CTDNEP1-205ENST00000570828 DKK2Q9UBU2 259 aa8.84□□□□□ -0.99
CTDNEP1-205ENST00000570828 DNAH10Q8IVF4 4471 aa8.84□□□□□ -1
CTDNEP1-205ENST00000570828 FAM240BA0A1B0GVZ2 78 aa8.83□□□□□ -1
CTDNEP1-205ENST00000570828 BOLA2-SMG1P6H3BVE0 249 aa8.83□□□□□ -1
CTDNEP1-205ENST00000570828 M0R2Z0 102 aa8.83□□□□□ -1
CTDNEP1-205ENST00000570828 CXCL3P19876 107 aa8.83□□□□□ -1
CTDNEP1-205ENST00000570828 PVALBP20472 110 aaPredicted RBP8.83□□□□□ -1
CTDNEP1-205ENST00000570828 S100A10P60903 97 aa8.83□□□□□ -1
CTDNEP1-205ENST00000570828 HIST1H1AQ02539 215 aaPredicted RBP8.83□□□□□ -1
CTDNEP1-205ENST00000570828 RAB31Q13636 194 aa8.83□□□□□ -1
CTDNEP1-205ENST00000570828 PATE2Q6UY27 113 aa8.83□□□□□ -1
CTDNEP1-205ENST00000570828 LINC00305Q7Z4B0 112 aa8.83□□□□□ -1
CTDNEP1-205ENST00000570828 C12orf45Q8N5I9 185 aaPredicted RBP8.83□□□□□ -1
CTDNEP1-205ENST00000570828 PPP1R14DQ9NXH3 145 aa8.83□□□□□ -1
CTDNEP1-205ENST00000570828 YTHDF2Q9Y5A9 579 aaKnown RBP8.83□□□□□ -1
CTDNEP1-205ENST00000570828 DNAH6Q9C0G6 4158 aa8.83□□□□□ -1
CTDNEP1-205ENST00000570828 CST7O76096 145 aa8.82□□□□□ -1
CTDNEP1-205ENST00000570828 P0DMU3 169 aa8.82□□□□□ -1
CTDNEP1-205ENST00000570828 FAM231AP0DMU4 169 aa8.82□□□□□ -1
CTDNEP1-205ENST00000570828 FAM231CP0DMU5 169 aa8.82□□□□□ -1
CTDNEP1-205ENST00000570828 HTN3P15516 51 aa8.82□□□□□ -1
CTDNEP1-205ENST00000570828 CXCL2P19875 107 aa8.82□□□□□ -1
CTDNEP1-205ENST00000570828 RHOBP62745 196 aa8.82□□□□□ -1
CTDNEP1-205ENST00000570828 LCN15Q6UWW0 184 aa8.82□□□□□ -1
CTDNEP1-205ENST00000570828 BAP18Q8IXM2 172 aa8.82□□□□□ -1
CTDNEP1-205ENST00000570828 OR8A1Q8NGG7 326 aa8.82□□□□□ -1
CTDNEP1-205ENST00000570828 C2orf50Q96LR7 162 aa8.82□□□□□ -1
CTDNEP1-205ENST00000570828 MGST2Q99735 147 aa8.82□□□□□ -1
CTDNEP1-205ENST00000570828 UQCC1Q9NVA1 299 aa8.82□□□□□ -1
CTDNEP1-205ENST00000570828 CAMLGP49069 296 aa8.81□□□□□ -1
CTDNEP1-205ENST00000570828 B2MP61769 119 aa8.81□□□□□ -1
CTDNEP1-205ENST00000570828 DAD1P61803 113 aa8.81□□□□□ -1
CTDNEP1-205ENST00000570828 PSG3Q16557 428 aa8.81□□□□□ -1
CTDNEP1-205ENST00000570828 Q6ZRG5 221 aa8.81□□□□□ -1
CTDNEP1-205ENST00000570828 LINC00299Q6ZSB3 139 aa8.81□□□□□ -1
CTDNEP1-205ENST00000570828 STX12Q86Y82 276 aa8.81□□□□□ -1
CTDNEP1-205ENST00000570828 BPIFA4PQ86YQ2 179 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms