RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 ARL6Q9H0F7 186 aa6.03□□□□□ -1.44
CTDNEP1-203ENST00000570385 NOP10Q9NPE3 64 aaKnown RBP6.03□□□□□ -1.44
CTDNEP1-203ENST00000570385 FLVCR2Q9UPI3 526 aa6.03□□□□□ -1.44
CTDNEP1-203ENST00000570385 LINC00588Q9Y4M8 146 aa6.03□□□□□ -1.44
CTDNEP1-203ENST00000570385 ABCA13Q86UQ4 5058 aa6.02□□□□□ -1.45
CTDNEP1-203ENST00000570385 C9orf170A2RU37 121 aa6.02□□□□□ -1.45
CTDNEP1-203ENST00000570385 CCDC160A6NGH7 325 aa6.02□□□□□ -1.45
CTDNEP1-203ENST00000570385 PMS2P5A8MQ11 134 aa6.02□□□□□ -1.45
CTDNEP1-203ENST00000570385 J3KRW8 73 aa6.02□□□□□ -1.45
CTDNEP1-203ENST00000570385 S100A7P31151 101 aa6.02□□□□□ -1.45
CTDNEP1-203ENST00000570385 CCL18P55774 89 aa6.02□□□□□ -1.45
CTDNEP1-203ENST00000570385 TAS2R60P59551 318 aa6.02□□□□□ -1.45
CTDNEP1-203ENST00000570385 B2MP61769 119 aa6.02□□□□□ -1.45
CTDNEP1-203ENST00000570385 ID3Q02535 119 aa6.02□□□□□ -1.45
CTDNEP1-203ENST00000570385 OR5I1Q13606 314 aa6.02□□□□□ -1.45
CTDNEP1-203ENST00000570385 CLINT1Q14677 625 aa6.02□□□□□ -1.45
CTDNEP1-203ENST00000570385 PATE2Q6UY27 113 aa6.02□□□□□ -1.45
CTDNEP1-203ENST00000570385 C6orf223Q8N319 242 aa6.02□□□□□ -1.45
CTDNEP1-203ENST00000570385 RPUSD4Q96CM3 377 aaKnown RBP6.02□□□□□ -1.45
CTDNEP1-203ENST00000570385 A0A0J9YY99 117 aa6.01□□□□□ -1.45
CTDNEP1-203ENST00000570385 CBY3A6NI87 242 aa6.01□□□□□ -1.45
CTDNEP1-203ENST00000570385 PRAC2D3DTV9 90 aa6.01□□□□□ -1.45
CTDNEP1-203ENST00000570385 TSPOP30536 169 aa6.01□□□□□ -1.45
CTDNEP1-203ENST00000570385 S100A5P33763 92 aa6.01□□□□□ -1.45
CTDNEP1-203ENST00000570385 FAM3BP58499 235 aaPredicted RBP6.01□□□□□ -1.45
CTDNEP1-203ENST00000570385 UBE2MP61081 183 aaKnown RBP6.01□□□□□ -1.45
CTDNEP1-203ENST00000570385 SSX7Q7RTT5 188 aa6.01□□□□□ -1.45
CTDNEP1-203ENST00000570385 ARV1Q9H2C2 271 aa6.01□□□□□ -1.45
CTDNEP1-203ENST00000570385 GSKIPQ9P0R6 139 aa6.01□□□□□ -1.45
CTDNEP1-203ENST00000570385 TIMM8BQ9Y5J9 83 aaPredicted RBP6.01□□□□□ -1.45
CTDNEP1-203ENST00000570385 LRP1BQ9NZR2 4599 aa6.01□□□□□ -1.45
CTDNEP1-203ENST00000570385 TRAV26-1A0A087WT03 109 aa6□□□□□ -1.45
CTDNEP1-203ENST00000570385 A0A087X0K7 114 aa6□□□□□ -1.45
CTDNEP1-203ENST00000570385 GOSR2O14653 212 aa6□□□□□ -1.45
CTDNEP1-203ENST00000570385 MRPS12O15235 138 aaKnown RBP6□□□□□ -1.45
CTDNEP1-203ENST00000570385 CDKN1BP46527 198 aa6□□□□□ -1.45
CTDNEP1-203ENST00000570385 INPP1P49441 399 aa6□□□□□ -1.45
CTDNEP1-203ENST00000570385 PLP1P60201 277 aa6□□□□□ -1.45
CTDNEP1-203ENST00000570385 SELENOTP62341 195 aa6□□□□□ -1.45
CTDNEP1-203ENST00000570385 DLK1P80370 383 aa6□□□□□ -1.45
CTDNEP1-203ENST00000570385 ARL16Q0P5N6 197 aa6□□□□□ -1.45
CTDNEP1-203ENST00000570385 MORN5Q5VZ52 161 aa6□□□□□ -1.45
CTDNEP1-203ENST00000570385 TMEM14EPQ6UXP3 125 aa6□□□□□ -1.45
CTDNEP1-203ENST00000570385 LINC00305Q7Z4B0 112 aa6□□□□□ -1.45
CTDNEP1-203ENST00000570385 CCDC190Q86UF4 302 aa6□□□□□ -1.45
CTDNEP1-203ENST00000570385 TMEM256Q8N2U0 113 aa6□□□□□ -1.45
CTDNEP1-203ENST00000570385 MAPKAPK5-AS1Q8N8E1 139 aa6□□□□□ -1.45
CTDNEP1-203ENST00000570385 OR10P1Q8NGE3 313 aa6□□□□□ -1.45
CTDNEP1-203ENST00000570385 C16orf74Q96GX8 76 aa6□□□□□ -1.45
CTDNEP1-203ENST00000570385 SMIM8Q96KF7 97 aa6□□□□□ -1.45
CTDNEP1-203ENST00000570385 GAGE12BA1L429 117 aa5.99□□□□□ -1.45
CTDNEP1-203ENST00000570385 SLC17A3O00476 420 aa5.99□□□□□ -1.45
CTDNEP1-203ENST00000570385 AGPAT2O15120 278 aa5.99□□□□□ -1.45
CTDNEP1-203ENST00000570385 GAGE7O76087 117 aa5.99□□□□□ -1.45
CTDNEP1-203ENST00000570385 NDUFB6O95139 128 aa5.99□□□□□ -1.45
CTDNEP1-203ENST00000570385 OR4E1P0C645 316 aa5.99□□□□□ -1.45
CTDNEP1-203ENST00000570385 GAGE12FP0CL80 117 aa5.99□□□□□ -1.45
CTDNEP1-203ENST00000570385 GAGE12GP0CL81 117 aa5.99□□□□□ -1.45
CTDNEP1-203ENST00000570385 GAGE12IP0CL82 117 aa5.99□□□□□ -1.45
CTDNEP1-203ENST00000570385 HOXA5P20719 270 aa5.99□□□□□ -1.45
CTDNEP1-203ENST00000570385 BAK1Q16611 211 aa5.99□□□□□ -1.45
CTDNEP1-203ENST00000570385 IAH1Q2TAA2 248 aaPredicted RBP5.99□□□□□ -1.45
CTDNEP1-203ENST00000570385 C4orf46Q504U0 113 aa5.99□□□□□ -1.45
CTDNEP1-203ENST00000570385 GFI1BQ5VTD9 330 aa5.99□□□□□ -1.45
CTDNEP1-203ENST00000570385 TEPPQ6URK8 271 aa5.99□□□□□ -1.45
CTDNEP1-203ENST00000570385 SPATA12Q7Z6I5 190 aa5.99□□□□□ -1.45
CTDNEP1-203ENST00000570385 RNASE8Q8TDE3 154 aaKnown RBP5.99□□□□□ -1.45
CTDNEP1-203ENST00000570385 TMEM263Q8WUH6 116 aaKnown RBP5.99□□□□□ -1.45
CTDNEP1-203ENST00000570385 GNPNAT1Q96EK6 184 aaPredicted RBP5.99□□□□□ -1.45
CTDNEP1-203ENST00000570385 KRTAP1-5Q9BYS1 174 aa5.99□□□□□ -1.45
CTDNEP1-203ENST00000570385 SRRQ9GZT4 340 aa5.99□□□□□ -1.45
CTDNEP1-203ENST00000570385 Q9H8V8 135 aa5.99□□□□□ -1.45
CTDNEP1-203ENST00000570385 NPVFQ9HCQ7 196 aa5.99□□□□□ -1.45
CTDNEP1-203ENST00000570385 ZNF331Q9NQX6 463 aaPredicted RBP5.99□□□□□ -1.45
CTDNEP1-203ENST00000570385 MGAT4CQ9UBM8 478 aa5.99□□□□□ -1.45
CTDNEP1-203ENST00000570385 TRAV5A0A0B4J249 113 aa5.98□□□□□ -1.45
CTDNEP1-203ENST00000570385 TRAV12-3A0A0B4J271 114 aa5.98□□□□□ -1.45
CTDNEP1-203ENST00000570385 H3BQ15 152 aa5.98□□□□□ -1.45
CTDNEP1-203ENST00000570385 H7BYZ3 331 aa5.98□□□□□ -1.45
CTDNEP1-203ENST00000570385 CCSO14618 274 aa5.98□□□□□ -1.45
CTDNEP1-203ENST00000570385 COX7A2P2O60397 106 aa5.98□□□□□ -1.45
CTDNEP1-203ENST00000570385 OPCMLQ14982 345 aa5.98□□□□□ -1.45
CTDNEP1-203ENST00000570385 TRIQKQ629K1 86 aa5.98□□□□□ -1.45
CTDNEP1-203ENST00000570385 LCN15Q6UWW0 184 aa5.98□□□□□ -1.45
CTDNEP1-203ENST00000570385 ZNF493Q6ZR52 646 aa5.98□□□□□ -1.45
CTDNEP1-203ENST00000570385 CCDC28AQ8IWP9 274 aa5.98□□□□□ -1.45
CTDNEP1-203ENST00000570385 ZBTB8BQ8NAP8 495 aaPredicted RBP5.98□□□□□ -1.45
CTDNEP1-203ENST00000570385 OR10J6PQ8NGY7 276 aa5.98□□□□□ -1.45
CTDNEP1-203ENST00000570385 TMEM37Q8WXS4 190 aa5.98□□□□□ -1.45
CTDNEP1-203ENST00000570385 MGST2Q99735 147 aa5.98□□□□□ -1.45
CTDNEP1-203ENST00000570385 RCL1Q9Y2P8 373 aaKnown RBP5.98□□□□□ -1.45
CTDNEP1-203ENST00000570385 C7orf66A4D0T2 115 aa5.97□□□□□ -1.45
CTDNEP1-203ENST00000570385 K7EPK0 472 aa5.97□□□□□ -1.45
CTDNEP1-203ENST00000570385 ZNF701M0R085 212 aaPredicted RBP5.97□□□□□ -1.45
CTDNEP1-203ENST00000570385 TSC22D2O75157 780 aa5.97□□□□□ -1.45
CTDNEP1-203ENST00000570385 CDK2AP2O75956 126 aa5.97□□□□□ -1.45
CTDNEP1-203ENST00000570385 MBPP02686 304 aaPredicted RBP5.97□□□□□ -1.45
CTDNEP1-203ENST00000570385 RLN2P04090 185 aa5.97□□□□□ -1.45
CTDNEP1-203ENST00000570385 CT45A10P0DMU9 189 aa5.97□□□□□ -1.45
CTDNEP1-203ENST00000570385 M6PRP20645 277 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms