RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 MYH2Q9UKX2 1941 aa2.84□□□□□ -1.95
CHD9-220ENST00000569794 TMEM235A6NFC5 223 aa2.84□□□□□ -1.95
CHD9-220ENST00000569794 OR2T8A6NH00 312 aa2.84□□□□□ -1.95
CHD9-220ENST00000569794 C16orf90A8MZG2 172 aa2.84□□□□□ -1.95
CHD9-220ENST00000569794 TCRAP04437 139 aa2.84□□□□□ -1.95
CHD9-220ENST00000569794 MUC1P15941 1255 aaPredicted RBP2.84□□□□□ -1.95
CHD9-220ENST00000569794 NFYAP23511 347 aaPredicted RBP2.84□□□□□ -1.95
CHD9-220ENST00000569794 CD24P25063 80 aa2.84□□□□□ -1.95
CHD9-220ENST00000569794 ZNF880Q6PDB4 577 aa2.84□□□□□ -1.95
CHD9-220ENST00000569794 NAA38Q9BRA0 125 aaKnown RBP2.84□□□□□ -1.95
CHD9-220ENST00000569794 SOX21Q9Y651 276 aaPredicted RBP2.84□□□□□ -1.95
CHD9-220ENST00000569794 ANKRD12Q6UB98 2062 aa2.84□□□□□ -1.95
CHD9-220ENST00000569794 NUP188Q5SRE5 1749 aa2.84□□□□□ -1.96
CHD9-220ENST00000569794 ADAMTSL1Q8N6G6 1762 aa2.84□□□□□ -1.96
CHD9-220ENST00000569794 TNS3Q68CZ2 1445 aa2.84□□□□□ -1.96
CHD9-220ENST00000569794 ERVK-7P63135 1459 aa2.84□□□□□ -1.96
CHD9-220ENST00000569794 GOLGB1Q14789 3259 aaKnown RBP2.83□□□□□ -1.96
CHD9-220ENST00000569794 ADGRB2O60241 1585 aa2.83□□□□□ -1.96
CHD9-220ENST00000569794 DSCAML1Q8TD84 2053 aa2.83□□□□□ -1.96
CHD9-220ENST00000569794 TMEM131LA2VDJ0 1609 aa2.83□□□□□ -1.96
CHD9-220ENST00000569794 TNS1Q9HBL0 1735 aaKnown RBP2.83□□□□□ -1.96
CHD9-220ENST00000569794 A0A0D9SG52 128 aa2.83□□□□□ -1.96
CHD9-220ENST00000569794 FAM236AA0A1B0GUQ0 79 aa2.83□□□□□ -1.96
CHD9-220ENST00000569794 FAM236BA0A1B0GV22 79 aa2.83□□□□□ -1.96
CHD9-220ENST00000569794 C7orf71A4D174 169 aa2.83□□□□□ -1.96
CHD9-220ENST00000569794 BBIP1A8MTZ0 92 aa2.83□□□□□ -1.96
CHD9-220ENST00000569794 A8MWV9 139 aa2.83□□□□□ -1.96
CHD9-220ENST00000569794 ZNF670-ZNF695F2Z2N8 137 aa2.83□□□□□ -1.96
CHD9-220ENST00000569794 S100A8P05109 93 aa2.83□□□□□ -1.96
CHD9-220ENST00000569794 DEFA4P12838 97 aa2.83□□□□□ -1.96
CHD9-220ENST00000569794 FGF7P21781 194 aa2.83□□□□□ -1.96
CHD9-220ENST00000569794 FOXA3P55318 350 aaPredicted RBP2.83□□□□□ -1.96
CHD9-220ENST00000569794 DYNLT1P63172 113 aa2.83□□□□□ -1.96
CHD9-220ENST00000569794 SCIMPQ6UWF3 145 aa2.83□□□□□ -1.96
CHD9-220ENST00000569794 OR4B1Q8NGF8 309 aa2.83□□□□□ -1.96
CHD9-220ENST00000569794 NAT14Q8WUY8 206 aa2.83□□□□□ -1.96
CHD9-220ENST00000569794 PPP3R2Q96LZ3 170 aa2.83□□□□□ -1.96
CHD9-220ENST00000569794 OR8B2Q96RD0 313 aa2.83□□□□□ -1.96
CHD9-220ENST00000569794 NIT2Q9NQR4 276 aa2.83□□□□□ -1.96
CHD9-220ENST00000569794 S4R3C0 116 aa2.83□□□□□ -1.96
CHD9-220ENST00000569794 RALGAPA2Q2PPJ7 1873 aa2.83□□□□□ -1.96
CHD9-220ENST00000569794 LOXHD1Q8IVV2 1947 aa2.83□□□□□ -1.96
CHD9-220ENST00000569794 TRIP11Q15643 1979 aa2.83□□□□□ -1.96
CHD9-220ENST00000569794 RREB1Q92766 1687 aa2.82□□□□□ -1.96
CHD9-220ENST00000569794 TAF1LQ8IZX4 1826 aa2.82□□□□□ -1.96
CHD9-220ENST00000569794 DICER1Q9UPY3 1922 aaKnown RBP2.82□□□□□ -1.96
CHD9-220ENST00000569794 C11orf86A6NJI1 115 aa2.82□□□□□ -1.96
CHD9-220ENST00000569794 CORTO00230 105 aa2.82□□□□□ -1.96
CHD9-220ENST00000569794 SNAPC5O75971 98 aa2.82□□□□□ -1.96
CHD9-220ENST00000569794 NCR2O95944 276 aa2.82□□□□□ -1.96
CHD9-220ENST00000569794 ZNF705BP0CI00 300 aaPredicted RBP2.82□□□□□ -1.96
CHD9-220ENST00000569794 ZNF728P0DKX0 622 aa2.82□□□□□ -1.96
CHD9-220ENST00000569794 ZNF22P17026 224 aaPredicted RBP2.82□□□□□ -1.96
CHD9-220ENST00000569794 Q6ZS52 159 aa2.82□□□□□ -1.96
CHD9-220ENST00000569794 LYPD6Q86Y78 171 aa2.82□□□□□ -1.96
CHD9-220ENST00000569794 WFDC11Q8NEX6 87 aa2.82□□□□□ -1.96
CHD9-220ENST00000569794 AQP3Q92482 292 aa2.82□□□□□ -1.96
CHD9-220ENST00000569794 PSMG3Q9BT73 122 aaPredicted RBP2.82□□□□□ -1.96
CHD9-220ENST00000569794 MINOS1-NBL1R4GNA1 71 aa2.82□□□□□ -1.96
CHD9-220ENST00000569794 SVILO95425 2214 aa2.82□□□□□ -1.96
CHD9-220ENST00000569794 C10orf71Q711Q0 1435 aa2.82□□□□□ -1.96
CHD9-220ENST00000569794 PXDNLA1KZ92 1463 aa2.82□□□□□ -1.96
CHD9-220ENST00000569794 PLXNC1O60486 1568 aa2.82□□□□□ -1.96
CHD9-220ENST00000569794 DOCK8Q8NF50 2099 aa2.81□□□□□ -1.96
CHD9-220ENST00000569794 TRAV7A0A075B6U4 112 aa2.81□□□□□ -1.96
CHD9-220ENST00000569794 TRAV27A0A087WT01 109 aa2.81□□□□□ -1.96
CHD9-220ENST00000569794 TRGV5A0A0B4J1U4 118 aa2.81□□□□□ -1.96
CHD9-220ENST00000569794 K7EM74 188 aa2.81□□□□□ -1.96
CHD9-220ENST00000569794 SDCBPO00560 298 aaPredicted RBP2.81□□□□□ -1.96
CHD9-220ENST00000569794 TIMM17BO60830 172 aa2.81□□□□□ -1.96
CHD9-220ENST00000569794 SLC25A5P05141 298 aaKnown RBP2.81□□□□□ -1.96
CHD9-220ENST00000569794 AKAIN1P0CW23 69 aa2.81□□□□□ -1.96
CHD9-220ENST00000569794 CRYGAP11844 174 aa2.81□□□□□ -1.96
CHD9-220ENST00000569794 CSRP1P21291 193 aaKnown RBP2.81□□□□□ -1.96
CHD9-220ENST00000569794 AKR1D1P51857 326 aa2.81□□□□□ -1.96
CHD9-220ENST00000569794 FOXA1P55317 472 aa2.81□□□□□ -1.96
CHD9-220ENST00000569794 LSM3P62310 102 aaKnown RBP2.81□□□□□ -1.96
CHD9-220ENST00000569794 QRFPP83859 136 aa2.81□□□□□ -1.96
CHD9-220ENST00000569794 RELAQ04206 551 aa2.81□□□□□ -1.96
CHD9-220ENST00000569794 FOXF1Q12946 379 aa2.81□□□□□ -1.96
CHD9-220ENST00000569794 KLRD1Q13241 179 aa2.81□□□□□ -1.96
CHD9-220ENST00000569794 EBI3Q14213 229 aa2.81□□□□□ -1.96
CHD9-220ENST00000569794 DIAPH2-AS1Q14236 149 aa2.81□□□□□ -1.96
CHD9-220ENST00000569794 C7orf65Q6ZTY9 151 aa2.81□□□□□ -1.96
CHD9-220ENST00000569794 C3orf62Q6ZUJ4 267 aa2.81□□□□□ -1.96
CHD9-220ENST00000569794 SLC35E3Q7Z769 313 aa2.81□□□□□ -1.96
CHD9-220ENST00000569794 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.81□□□□□ -1.96
CHD9-220ENST00000569794 MORN4Q8NDC4 146 aa2.81□□□□□ -1.96
CHD9-220ENST00000569794 BCL2L10Q9HD36 194 aa2.81□□□□□ -1.96
CHD9-220ENST00000569794 SPATA31E1Q6ZUB1 1445 aa2.81□□□□□ -1.96
CHD9-220ENST00000569794 KCPQ6ZWJ8 1503 aa2.81□□□□□ -1.96
CHD9-220ENST00000569794 TULP4Q9NRJ4 1543 aa2.81□□□□□ -1.96
CHD9-220ENST00000569794 CACNA1SQ13698 1873 aa2.81□□□□□ -1.96
CHD9-220ENST00000569794 CACNA1GO43497 2377 aa2.81□□□□□ -1.96
CHD9-220ENST00000569794 SZT2Q5T011 3432 aa2.81□□□□□ -1.96
CHD9-220ENST00000569794 DOCK6Q96HP0 2047 aa2.8□□□□□ -1.96
CHD9-220ENST00000569794 TICRRQ7Z2Z1 1910 aa2.8□□□□□ -1.96
CHD9-220ENST00000569794 NLRC5Q86WI3 1866 aa2.8□□□□□ -1.96
CHD9-220ENST00000569794 CICQ96RK0 1608 aaPredicted RBP2.8□□□□□ -1.96
CHD9-220ENST00000569794 IGHV3OR16-8A0A075B7F1 116 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms