RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 SUN5Q8TC36 379 aa17.57■□□□□ 0.4
RAB40C-212ENST00000569575 SAT2Q96F10 170 aaPredicted RBP17.57■□□□□ 0.4
RAB40C-212ENST00000569575 PLA2G2EQ9NZK7 142 aa17.57■□□□□ 0.4
RAB40C-212ENST00000569575 TRBV19A0A075B6N1 114 aa17.56■□□□□ 0.4
RAB40C-212ENST00000569575 HBE1P02100 147 aa17.56■□□□□ 0.4
RAB40C-212ENST00000569575 H2AFB1P0C5Y9 115 aa17.56■□□□□ 0.4
RAB40C-212ENST00000569575 BLOC1S1P78537 153 aa17.56■□□□□ 0.4
RAB40C-212ENST00000569575 FXYD5Q96DB9 178 aa17.56■□□□□ 0.4
RAB40C-212ENST00000569575 IGKV3-7A0A075B6H7 116 aa17.55■□□□□ 0.4
RAB40C-212ENST00000569575 MAP1LC3B2A6NCE7 125 aa17.55■□□□□ 0.4
RAB40C-212ENST00000569575 SOCS3O14543 225 aa17.55■□□□□ 0.4
RAB40C-212ENST00000569575 ARL14EPLP0DKL9 152 aa17.55■□□□□ 0.4
RAB40C-212ENST00000569575 PPT1P50897 306 aa17.55■□□□□ 0.4
RAB40C-212ENST00000569575 UBE2L3P68036 154 aaKnown RBP17.55■□□□□ 0.4
RAB40C-212ENST00000569575 ZNF726P1Q15940 193 aa17.55■□□□□ 0.4
RAB40C-212ENST00000569575 ALKAL2Q6UX46 152 aa17.55■□□□□ 0.4
RAB40C-212ENST00000569575 GBGT1Q8N5D6 347 aa17.55■□□□□ 0.4
RAB40C-212ENST00000569575 ZNF503Q96F45 646 aa17.55■□□□□ 0.4
RAB40C-212ENST00000569575 C16orf92Q96LL3 132 aa17.55■□□□□ 0.4
RAB40C-212ENST00000569575 MAP1LC3BQ9GZQ8 125 aa17.55■□□□□ 0.4
RAB40C-212ENST00000569575 ZNF586Q9NXT0 402 aa17.55■□□□□ 0.4
RAB40C-212ENST00000569575 PKD1L1Q8TDX9 2849 aa17.54■□□□□ 0.4
RAB40C-212ENST00000569575 H3BQ15 152 aa17.54■□□□□ 0.4
RAB40C-212ENST00000569575 ZNF331Q9NQX6 463 aaPredicted RBP17.54■□□□□ 0.4
RAB40C-212ENST00000569575 PRELID1Q9Y255 219 aa17.54■□□□□ 0.4
RAB40C-212ENST00000569575 PYYP10082 97 aa17.53■□□□□ 0.4
RAB40C-212ENST00000569575 GCHFRP30047 84 aa17.53■□□□□ 0.4
RAB40C-212ENST00000569575 ARL6IP6Q8N6S5 226 aa17.53■□□□□ 0.4
RAB40C-212ENST00000569575 SFT2D1Q8WV19 159 aa17.53■□□□□ 0.4
RAB40C-212ENST00000569575 C17orf77Q96MU5 243 aa17.53■□□□□ 0.4
RAB40C-212ENST00000569575 NKX6-2Q9C056 277 aaPredicted RBP17.53■□□□□ 0.4
RAB40C-212ENST00000569575 AAMDCQ9H7C9 122 aa17.53■□□□□ 0.4
RAB40C-212ENST00000569575 ARL2-SNX15V9GYD0 113 aa17.53■□□□□ 0.4
RAB40C-212ENST00000569575 TFPI2P48307 235 aa17.52■□□□□ 0.4
RAB40C-212ENST00000569575 FHITP49789 147 aa17.52■□□□□ 0.4
RAB40C-212ENST00000569575 FAM74A1Q5RGS3 127 aa17.52■□□□□ 0.4
RAB40C-212ENST00000569575 WFDC3Q8IUB2 231 aa17.52■□□□□ 0.4
RAB40C-212ENST00000569575 ZNF680Q8NEM1 530 aa17.52■□□□□ 0.4
RAB40C-212ENST00000569575 MRPL53Q96EL3 112 aaKnown RBP17.52■□□□□ 0.4
RAB40C-212ENST00000569575 ZNF705EA8MWA4 302 aaPredicted RBP17.51■□□□□ 0.39
RAB40C-212ENST00000569575 OR11H12B2RN74 326 aa17.51■□□□□ 0.39
RAB40C-212ENST00000569575 OR10J4P0C629 311 aa17.51■□□□□ 0.39
RAB40C-212ENST00000569575 CD81P60033 236 aa17.51■□□□□ 0.39
RAB40C-212ENST00000569575 KRTAP10-11P60412 298 aa17.51■□□□□ 0.39
RAB40C-212ENST00000569575 PMS2P11Q13670 270 aa17.51■□□□□ 0.39
RAB40C-212ENST00000569575 HMGB3O15347 200 aaKnown RBP17.5■□□□□ 0.39
RAB40C-212ENST00000569575 UBQLN2Q9UHD9 624 aa17.5■□□□□ 0.39
RAB40C-212ENST00000569575 SELENOKQ9Y6D0 94 aa17.5■□□□□ 0.39
RAB40C-212ENST00000569575 A0A1W2PRE2 83 aa17.49■□□□□ 0.39
RAB40C-212ENST00000569575 SSX7Q7RTT5 188 aa17.49■□□□□ 0.39
RAB40C-212ENST00000569575 MAP6D1Q9H9H5 199 aa17.49■□□□□ 0.39
RAB40C-212ENST00000569575 NDUFB4O95168 129 aa17.48■□□□□ 0.39
RAB40C-212ENST00000569575 PSG3Q16557 428 aa17.48■□□□□ 0.39
RAB40C-212ENST00000569575 RXFP4Q8TDU9 374 aa17.48■□□□□ 0.39
RAB40C-212ENST00000569575 BLNKQ8WV28 456 aa17.48■□□□□ 0.39
RAB40C-212ENST00000569575 TRAV8-2A0A0B4J237 113 aa17.47■□□□□ 0.39
RAB40C-212ENST00000569575 TAGLN2P37802 199 aaKnown RBP17.47■□□□□ 0.39
RAB40C-212ENST00000569575 ODF3L2Q3SX64 289 aa17.47■□□□□ 0.39
RAB40C-212ENST00000569575 ZNF767PQ75MW2 155 aa17.47■□□□□ 0.39
RAB40C-212ENST00000569575 Q8N1Y9 231 aa17.47■□□□□ 0.39
RAB40C-212ENST00000569575 OTORQ9NRC9 128 aa17.47■□□□□ 0.39
RAB40C-212ENST00000569575 C19orf73Q9NVV2 129 aa17.47■□□□□ 0.39
RAB40C-212ENST00000569575 A8MZ25 164 aa17.46■□□□□ 0.39
RAB40C-212ENST00000569575 CD7P09564 240 aa17.46■□□□□ 0.39
RAB40C-212ENST00000569575 ZNF688P0C7X2 276 aa17.46■□□□□ 0.39
RAB40C-212ENST00000569575 PSMG4Q5JS54 123 aa17.46■□□□□ 0.39
RAB40C-212ENST00000569575 LYPD6BQ8NI32 183 aa17.46■□□□□ 0.39
RAB40C-212ENST00000569575 TXNDC17Q9BRA2 123 aa17.46■□□□□ 0.39
RAB40C-212ENST00000569575 TCEAL7Q9BRU2 100 aa17.46■□□□□ 0.39
RAB40C-212ENST00000569575 CSN1S1P47710 185 aa17.45■□□□□ 0.38
RAB40C-212ENST00000569575 DEFB131AP59861 70 aa17.45■□□□□ 0.38
RAB40C-212ENST00000569575 RANP62826 216 aaKnown RBP17.45■□□□□ 0.38
RAB40C-212ENST00000569575 FOXI2Q6ZQN5 318 aa17.45■□□□□ 0.38
RAB40C-212ENST00000569575 IQCF2Q8IXL9 164 aa17.45■□□□□ 0.38
RAB40C-212ENST00000569575 LINC00052Q96N35 136 aa17.45■□□□□ 0.38
RAB40C-212ENST00000569575 CLUHP3Q96NS8 147 aa17.45■□□□□ 0.38
RAB40C-212ENST00000569575 MANBALQ9NQG1 85 aa17.45■□□□□ 0.38
RAB40C-212ENST00000569575 SLC17A3O00476 420 aa17.44■□□□□ 0.38
RAB40C-212ENST00000569575 FGF8P55075 233 aaPredicted RBP17.44■□□□□ 0.38
RAB40C-212ENST00000569575 FAM24BQ8N5W8 94 aa17.44■□□□□ 0.38
RAB40C-212ENST00000569575 PRR25Q96S07 402 aa17.44■□□□□ 0.38
RAB40C-212ENST00000569575 Q9H3A6 140 aa17.44■□□□□ 0.38
RAB40C-212ENST00000569575 IFNA1P01562 189 aa17.43■□□□□ 0.38
RAB40C-212ENST00000569575 EBLN2Q6P2I7 272 aa17.43■□□□□ 0.38
RAB40C-212ENST00000569575 SERTM2A0A1B0GWG4 89 aa17.42■□□□□ 0.38
RAB40C-212ENST00000569575 EIF3GO75821 320 aaKnown RBP eCLIP17.42■□□□□ 0.38
RAB40C-212ENST00000569575 DUSP14O95147 198 aaKnown RBP17.42■□□□□ 0.38
RAB40C-212ENST00000569575 RAB14P61106 215 aa17.42■□□□□ 0.38
RAB40C-212ENST00000569575 ICAM4Q14773 271 aa17.42■□□□□ 0.38
RAB40C-212ENST00000569575 ZNF738Q8NE65 137 aa17.42■□□□□ 0.38
RAB40C-212ENST00000569575 CMTM2Q8TAZ6 248 aa17.42■□□□□ 0.38
RAB40C-212ENST00000569575 SAV1Q9H4B6 383 aaPredicted RBP17.42■□□□□ 0.38
RAB40C-212ENST00000569575 H3BTX0 84 aa17.41■□□□□ 0.38
RAB40C-212ENST00000569575 C5orf17Q8NAS9 161 aa17.41■□□□□ 0.38
RAB40C-212ENST00000569575 RPUSD4Q96CM3 377 aaKnown RBP17.41■□□□□ 0.38
RAB40C-212ENST00000569575 TMPRSS5Q9H3S3 457 aa17.41■□□□□ 0.38
RAB40C-212ENST00000569575 AURKAIP1Q9NWT8 199 aaPredicted RBP17.41■□□□□ 0.38
RAB40C-212ENST00000569575 RBAKDNA6NC62 111 aa17.4■□□□□ 0.38
RAB40C-212ENST00000569575 PGPA6NDG6 321 aa17.4■□□□□ 0.38
RAB40C-212ENST00000569575 SNRPCP09234 159 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms