RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 GIPP09681 153 aaPredicted RBP7.16□□□□□ -1.26
CLN6-209ENST00000569336 CXCL3P19876 107 aa7.16□□□□□ -1.26
CLN6-209ENST00000569336 GDF5OSQ5U4N7 250 aa7.16□□□□□ -1.26
CLN6-209ENST00000569336 HRH4Q9H3N8 390 aa7.16□□□□□ -1.26
CLN6-209ENST00000569336 XCL2Q9UBD3 114 aa7.16□□□□□ -1.26
CLN6-209ENST00000569336 DYNC2H1Q8NCM8 4307 aaKnown RBP7.15□□□□□ -1.26
CLN6-209ENST00000569336 CXorf65A6NEN9 183 aa7.15□□□□□ -1.26
CLN6-209ENST00000569336 NUPR2A6NF83 97 aa7.15□□□□□ -1.26
CLN6-209ENST00000569336 ZNF705EA8MWA4 302 aaPredicted RBP7.15□□□□□ -1.26
CLN6-209ENST00000569336 MRPS12O15235 138 aaKnown RBP7.15□□□□□ -1.26
CLN6-209ENST00000569336 ZNF253O75346 499 aa7.15□□□□□ -1.26
CLN6-209ENST00000569336 IGKV3-20P01619 116 aa7.15□□□□□ -1.26
CLN6-209ENST00000569336 GIG44P09565 113 aaPredicted RBP7.15□□□□□ -1.26
CLN6-209ENST00000569336 IGLC2P0DOY2 106 aa7.15□□□□□ -1.26
CLN6-209ENST00000569336 PSG9Q00887 426 aa7.15□□□□□ -1.26
CLN6-209ENST00000569336 FCN2Q15485 313 aa7.15□□□□□ -1.26
CLN6-209ENST00000569336 FAM78BQ5VT40 261 aa7.15□□□□□ -1.26
CLN6-209ENST00000569336 RNF182Q8N6D2 247 aa7.15□□□□□ -1.26
CLN6-209ENST00000569336 OR11H7Q8NGC8 314 aa7.15□□□□□ -1.26
CLN6-209ENST00000569336 SCGB1C1Q8TD33 95 aa7.15□□□□□ -1.26
CLN6-209ENST00000569336 C20orf173Q96LM9 149 aa7.15□□□□□ -1.26
CLN6-209ENST00000569336 RNF126Q9BV68 326 aa7.15□□□□□ -1.26
CLN6-209ENST00000569336 MRPL32Q9BYC8 188 aaKnown RBP7.15□□□□□ -1.26
CLN6-209ENST00000569336 PARD6GQ9BYG4 376 aaPredicted RBP7.15□□□□□ -1.26
CLN6-209ENST00000569336 TRAV8-2A0A0B4J237 113 aa7.14□□□□□ -1.27
CLN6-209ENST00000569336 A8MTW9 85 aa7.14□□□□□ -1.27
CLN6-209ENST00000569336 F6UB75 175 aa7.14□□□□□ -1.27
CLN6-209ENST00000569336 CNN1P51911 297 aaKnown RBP7.14□□□□□ -1.27
CLN6-209ENST00000569336 DEFB1P60022 68 aa7.14□□□□□ -1.27
CLN6-209ENST00000569336 PDE6HQ13956 83 aa7.14□□□□□ -1.27
CLN6-209ENST00000569336 ZNF266Q14584 549 aa7.14□□□□□ -1.27
CLN6-209ENST00000569336 PSG3Q16557 428 aa7.14□□□□□ -1.27
CLN6-209ENST00000569336 MORN5Q5VZ52 161 aa7.14□□□□□ -1.27
CLN6-209ENST00000569336 Q8NAQ8 132 aa7.14□□□□□ -1.27
CLN6-209ENST00000569336 CSNK1G2-AS1Q8NCQ2 148 aa7.14□□□□□ -1.27
CLN6-209ENST00000569336 C17orf77Q96MU5 243 aa7.14□□□□□ -1.27
CLN6-209ENST00000569336 SMIM3Q9BZL3 60 aa7.14□□□□□ -1.27
CLN6-209ENST00000569336 ZNF331Q9NQX6 463 aaPredicted RBP7.14□□□□□ -1.27
CLN6-209ENST00000569336 PPP1R14DQ9NXH3 145 aa7.14□□□□□ -1.27
CLN6-209ENST00000569336 TMEM14CQ9P0S9 112 aa7.14□□□□□ -1.27
CLN6-209ENST00000569336 GOLT1BQ9Y3E0 138 aa7.14□□□□□ -1.27
CLN6-209ENST00000569336 RYR2Q92736 4967 aa7.13□□□□□ -1.27
CLN6-209ENST00000569336 IGHV4-28A0A0C4DH34 117 aa7.13□□□□□ -1.27
CLN6-209ENST00000569336 SMIM9A6NGZ8 99 aa7.13□□□□□ -1.27
CLN6-209ENST00000569336 INSP01308 110 aa7.13□□□□□ -1.27
CLN6-209ENST00000569336 HIST1H1AQ02539 215 aaPredicted RBP7.13□□□□□ -1.27
CLN6-209ENST00000569336 PMS2P11Q13670 270 aa7.13□□□□□ -1.27
CLN6-209ENST00000569336 OXA1LQ15070 435 aa7.13□□□□□ -1.27
CLN6-209ENST00000569336 INO80EQ8NBZ0 244 aaPredicted RBP7.13□□□□□ -1.27
CLN6-209ENST00000569336 OR8A1Q8NGG7 326 aa7.13□□□□□ -1.27
CLN6-209ENST00000569336 OR10J6PQ8NGY7 276 aa7.13□□□□□ -1.27
CLN6-209ENST00000569336 C11orf45Q8TAV5 145 aa7.13□□□□□ -1.27
CLN6-209ENST00000569336 RPUSD4Q96CM3 377 aaKnown RBP7.13□□□□□ -1.27
CLN6-209ENST00000569336 AQP10Q96PS8 301 aa7.13□□□□□ -1.27
CLN6-209ENST00000569336 SLC35B3Q9H1N7 401 aa7.13□□□□□ -1.27
CLN6-209ENST00000569336 AAMDCQ9H7C9 122 aa7.13□□□□□ -1.27
CLN6-209ENST00000569336 X6R8D5 127 aa7.13□□□□□ -1.27
CLN6-209ENST00000569336 ALMS1Q8TCU4 4167 aa7.12□□□□□ -1.27
CLN6-209ENST00000569336 TMEM189A5PLL7 270 aa7.12□□□□□ -1.27
CLN6-209ENST00000569336 ZNF705FA8MVS1 300 aaPredicted RBP7.12□□□□□ -1.27
CLN6-209ENST00000569336 BOLA2-SMG1P6H3BVE0 249 aa7.12□□□□□ -1.27
CLN6-209ENST00000569336 SLC17A3O00476 420 aa7.12□□□□□ -1.27
CLN6-209ENST00000569336 JTBO76095 146 aa7.12□□□□□ -1.27
CLN6-209ENST00000569336 ZNF705DP0CH99 300 aaPredicted RBP7.12□□□□□ -1.27
CLN6-209ENST00000569336 ZNF705BP0CI00 300 aaPredicted RBP7.12□□□□□ -1.27
CLN6-209ENST00000569336 HIST1H1EP10412 219 aaKnown RBP7.12□□□□□ -1.27
CLN6-209ENST00000569336 TAS2R45P59539 299 aa7.12□□□□□ -1.27
CLN6-209ENST00000569336 RHOBP62745 196 aa7.12□□□□□ -1.27
CLN6-209ENST00000569336 KHDC3LQ587J8 217 aa7.12□□□□□ -1.27
CLN6-209ENST00000569336 FFAR4Q5NUL3 377 aa7.12□□□□□ -1.27
CLN6-209ENST00000569336 IGFL4Q6B9Z1 124 aa7.12□□□□□ -1.27
CLN6-209ENST00000569336 ZNF705AQ6ZN79 300 aaPredicted RBP7.12□□□□□ -1.27
CLN6-209ENST00000569336 MRPL53Q96EL3 112 aaKnown RBP7.12□□□□□ -1.27
CLN6-209ENST00000569336 IGF2BP2-AS1Q96M15 143 aa7.12□□□□□ -1.27
CLN6-209ENST00000569336 NEU1Q99519 415 aa7.12□□□□□ -1.27
CLN6-209ENST00000569336 TMEM208Q9BTX3 173 aa7.12□□□□□ -1.27
CLN6-209ENST00000569336 FUT9Q9Y231 359 aa7.12□□□□□ -1.27
CLN6-209ENST00000569336 PRELID1Q9Y255 219 aa7.12□□□□□ -1.27
CLN6-209ENST00000569336 KLK5Q9Y337 293 aaPredicted RBP7.12□□□□□ -1.27
CLN6-209ENST00000569336 TIMM9Q9Y5J7 89 aa7.12□□□□□ -1.27
CLN6-209ENST00000569336 TRBV19A0A075B6N1 114 aa7.11□□□□□ -1.27
CLN6-209ENST00000569336 TRAV5A0A0B4J249 113 aa7.11□□□□□ -1.27
CLN6-209ENST00000569336 TEX48A0A1B0GUV7 120 aa7.11□□□□□ -1.27
CLN6-209ENST00000569336 H3BQ15 152 aa7.11□□□□□ -1.27
CLN6-209ENST00000569336 OR7C2O60412 319 aa7.11□□□□□ -1.27
CLN6-209ENST00000569336 HLA-DMBP28068 263 aa7.11□□□□□ -1.27
CLN6-209ENST00000569336 FXYD7P58549 80 aa7.11□□□□□ -1.27
CLN6-209ENST00000569336 PLECQ15149 4684 aaKnown RBP7.11□□□□□ -1.27
CLN6-209ENST00000569336 GCSAMLQ5JQS6 135 aa7.11□□□□□ -1.27
CLN6-209ENST00000569336 AMTNQ6UX39 209 aa7.11□□□□□ -1.27
CLN6-209ENST00000569336 TMEM256Q8N2U0 113 aa7.11□□□□□ -1.27
CLN6-209ENST00000569336 OR2T35Q8NGX2 323 aa7.11□□□□□ -1.27
CLN6-209ENST00000569336 SAT2Q96F10 170 aaPredicted RBP7.11□□□□□ -1.27
CLN6-209ENST00000569336 SLC25A2Q9BXI2 301 aa7.11□□□□□ -1.27
CLN6-209ENST00000569336 ZNF586Q9NXT0 402 aa7.11□□□□□ -1.27
CLN6-209ENST00000569336 RFNGQ9Y644 331 aa7.11□□□□□ -1.27
CLN6-209ENST00000569336 IGHV3OR16-12A0A075B7B8 117 aa7.1□□□□□ -1.27
CLN6-209ENST00000569336 FXYD6-FXYD2A0A087WZ82 144 aa7.1□□□□□ -1.27
CLN6-209ENST00000569336 C11orf94C9JXX5 98 aa7.1□□□□□ -1.27
CLN6-209ENST00000569336 H3BTX0 84 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms