RNA–Protein interactions for RNA: ENST00000569007.1

EDC3-215, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-215ENST00000569007 Q6ZRG5 221 aa12.63□□□□□ -0.39
EDC3-215ENST00000569007 LRRC20Q8TCA0 184 aa12.63□□□□□ -0.39
EDC3-215ENST00000569007 NMES1Q9C002 83 aa12.63□□□□□ -0.39
EDC3-215ENST00000569007 DNAJC4Q9NNZ3 241 aa12.63□□□□□ -0.39
EDC3-215ENST00000569007 DUSP14O95147 198 aaKnown RBP12.62□□□□□ -0.39
EDC3-215ENST00000569007 RLN2P04090 185 aa12.62□□□□□ -0.39
EDC3-215ENST00000569007 SNRPCP09234 159 aaKnown RBP12.62□□□□□ -0.39
EDC3-215ENST00000569007 CXCL3P19876 107 aa12.62□□□□□ -0.39
EDC3-215ENST00000569007 OPCMLQ14982 345 aa12.62□□□□□ -0.39
EDC3-215ENST00000569007 ATP6V1FQ16864 119 aa12.62□□□□□ -0.39
EDC3-215ENST00000569007 LRRC37A5PQ49AS3 106 aa12.62□□□□□ -0.39
EDC3-215ENST00000569007 NEU1Q99519 415 aa12.62□□□□□ -0.39
EDC3-215ENST00000569007 OR5AC2Q9NZP5 309 aa12.62□□□□□ -0.39
EDC3-215ENST00000569007 CELA1Q9UNI1 258 aa12.62□□□□□ -0.39
EDC3-215ENST00000569007 E5RGE8 158 aa12.61□□□□□ -0.39
EDC3-215ENST00000569007 H0YIZ8 118 aa12.61□□□□□ -0.39
EDC3-215ENST00000569007 SSNA1O43805 119 aa12.61□□□□□ -0.39
EDC3-215ENST00000569007 FGF7P21781 194 aa12.61□□□□□ -0.39
EDC3-215ENST00000569007 RPL29P47914 159 aaKnown RBP12.61□□□□□ -0.39
EDC3-215ENST00000569007 H2BFSP57053 126 aa12.61□□□□□ -0.39
EDC3-215ENST00000569007 CYCSP99999 105 aaKnown RBP12.61□□□□□ -0.39
EDC3-215ENST00000569007 NHLH2Q02577 135 aa12.61□□□□□ -0.39
EDC3-215ENST00000569007 PSG3Q16557 428 aa12.61□□□□□ -0.39
EDC3-215ENST00000569007 Q6ZTC4 211 aa12.61□□□□□ -0.39
EDC3-215ENST00000569007 BPIFA4PQ86YQ2 179 aa12.61□□□□□ -0.39
EDC3-215ENST00000569007 C2CD4CQ8TF44 421 aa12.61□□□□□ -0.39
EDC3-215ENST00000569007 SLC39A9Q9NUM3 307 aa12.61□□□□□ -0.39
EDC3-215ENST00000569007 GOLT1BQ9Y3E0 138 aa12.61□□□□□ -0.39
EDC3-215ENST00000569007 SMIM9A6NGZ8 99 aa12.6□□□□□ -0.39
EDC3-215ENST00000569007 C11orf94C9JXX5 98 aa12.6□□□□□ -0.39
EDC3-215ENST00000569007 B2MP61769 119 aa12.6□□□□□ -0.39
EDC3-215ENST00000569007 LCN15Q6UWW0 184 aa12.6□□□□□ -0.39
EDC3-215ENST00000569007 C1orf158Q8N1D5 194 aa12.6□□□□□ -0.39
EDC3-215ENST00000569007 OR11H7Q8NGC8 314 aa12.6□□□□□ -0.39
EDC3-215ENST00000569007 OR1L4Q8NGR5 311 aa12.6□□□□□ -0.39
EDC3-215ENST00000569007 TRAV5A0A0B4J249 113 aa12.59□□□□□ -0.39
EDC3-215ENST00000569007 H3BTX0 84 aa12.59□□□□□ -0.39
EDC3-215ENST00000569007 M0R2Z0 102 aa12.59□□□□□ -0.39
EDC3-215ENST00000569007 PRB4P10163 310 aaPredicted RBP12.59□□□□□ -0.39
EDC3-215ENST00000569007 CXCL2P19875 107 aa12.59□□□□□ -0.39
EDC3-215ENST00000569007 EMP1P54849 157 aa12.59□□□□□ -0.39
EDC3-215ENST00000569007 HIST1H1AQ02539 215 aaPredicted RBP12.59□□□□□ -0.39
EDC3-215ENST00000569007 SPINK13Q1W4C9 94 aa12.59□□□□□ -0.39
EDC3-215ENST00000569007 C12orf74Q32Q52 190 aa12.59□□□□□ -0.39
EDC3-215ENST00000569007 ZNF767PQ75MW2 155 aa12.59□□□□□ -0.39
EDC3-215ENST00000569007 OR8A1Q8NGG7 326 aa12.59□□□□□ -0.39
EDC3-215ENST00000569007 OR5C1Q8NGR4 320 aa12.59□□□□□ -0.39
EDC3-215ENST00000569007 CHAC2Q8WUX2 184 aa12.59□□□□□ -0.39
EDC3-215ENST00000569007 RPUSD4Q96CM3 377 aaKnown RBP12.59□□□□□ -0.39
EDC3-215ENST00000569007 IGF2BP2-AS1Q96M15 143 aa12.59□□□□□ -0.39
EDC3-215ENST00000569007 PFDN5Q99471 154 aa12.59□□□□□ -0.39
EDC3-215ENST00000569007 SLC25A31Q9H0C2 315 aa12.59□□□□□ -0.39
EDC3-215ENST00000569007 ZNF331Q9NQX6 463 aaPredicted RBP12.59□□□□□ -0.39
EDC3-215ENST00000569007 RFNGQ9Y644 331 aa12.59□□□□□ -0.39
EDC3-215ENST00000569007 PXMP4Q9Y6I8 212 aa12.59□□□□□ -0.39
EDC3-215ENST00000569007 VPS13DQ5THJ4 4388 aa12.58□□□□□ -0.4
EDC3-215ENST00000569007 H3BQ15 152 aa12.58□□□□□ -0.4
EDC3-215ENST00000569007 SLC17A3O00476 420 aa12.58□□□□□ -0.4
EDC3-215ENST00000569007 MPDU1O75352 247 aa12.58□□□□□ -0.4
EDC3-215ENST00000569007 AMBPP02760 352 aa12.58□□□□□ -0.4
EDC3-215ENST00000569007 IGLC2P0DOY2 106 aa12.58□□□□□ -0.4
EDC3-215ENST00000569007 PPP1R1CQ8WVI7 109 aa12.58□□□□□ -0.4
EDC3-215ENST00000569007 KMT2AQ03164 3969 aa12.57□□□□□ -0.4
EDC3-215ENST00000569007 TRAV10A0A0B4J240 114 aa12.57□□□□□ -0.4
EDC3-215ENST00000569007 TMEM189A5PLL7 270 aa12.57□□□□□ -0.4
EDC3-215ENST00000569007 IGLL5B9A064 214 aa12.57□□□□□ -0.4
EDC3-215ENST00000569007 RHOBP62745 196 aa12.57□□□□□ -0.4
EDC3-215ENST00000569007 CLINT1Q14677 625 aa12.57□□□□□ -0.4
EDC3-215ENST00000569007 THAP6Q8TBB0 222 aa12.57□□□□□ -0.4
EDC3-215ENST00000569007 SLC50A1Q9BRV3 221 aa12.57□□□□□ -0.4
EDC3-215ENST00000569007 TMEM208Q9BTX3 173 aa12.57□□□□□ -0.4
EDC3-215ENST00000569007 NPCDR1Q9BY65 106 aa12.57□□□□□ -0.4
EDC3-215ENST00000569007 EPPK1P58107 5090 aaKnown RBP12.56□□□□□ -0.4
EDC3-215ENST00000569007 BOLA2-SMG1P6H3BVE0 249 aa12.56□□□□□ -0.4
EDC3-215ENST00000569007 CRXO43186 299 aaPredicted RBP12.56□□□□□ -0.4
EDC3-215ENST00000569007 INSP01308 110 aa12.56□□□□□ -0.4
EDC3-215ENST00000569007 HBE1P02100 147 aa12.56□□□□□ -0.4
EDC3-215ENST00000569007 BAP18Q8IXM2 172 aa12.56□□□□□ -0.4
EDC3-215ENST00000569007 RNF126Q9BV68 326 aa12.56□□□□□ -0.4
EDC3-215ENST00000569007 LOC102723971A0A1B0GUV8 181 aa12.55□□□□□ -0.4
EDC3-215ENST00000569007 MPC2O95563 127 aa12.55□□□□□ -0.4
EDC3-215ENST00000569007 SPART-AS1P0CW21 52 aa12.55□□□□□ -0.4
EDC3-215ENST00000569007 TCTAP57738 103 aa12.55□□□□□ -0.4
EDC3-215ENST00000569007 RRN3P1Q2M238 152 aa12.55□□□□□ -0.4
EDC3-215ENST00000569007 GCSAMLQ5JQS6 135 aa12.55□□□□□ -0.4
EDC3-215ENST00000569007 LGALS9CQ6DKI2 356 aa12.55□□□□□ -0.4
EDC3-215ENST00000569007 SAT2Q96F10 170 aaPredicted RBP12.55□□□□□ -0.4
EDC3-215ENST00000569007 PPP1R14DQ9NXH3 145 aa12.55□□□□□ -0.4
EDC3-215ENST00000569007 TRAV12-2A0A075B6T6 113 aa12.54□□□□□ -0.4
EDC3-215ENST00000569007 PRAC2D3DTV9 90 aa12.54□□□□□ -0.4
EDC3-215ENST00000569007 GUK1Q16774 197 aa12.54□□□□□ -0.4
EDC3-215ENST00000569007 ZNF586Q9NXT0 402 aa12.54□□□□□ -0.4
EDC3-215ENST00000569007 DKK2Q9UBU2 259 aa12.54□□□□□ -0.4
EDC3-215ENST00000569007 APLNQ9ULZ1 77 aa12.54□□□□□ -0.4
EDC3-215ENST00000569007 DEFB131BA0A096LNP1 70 aa12.53□□□□□ -0.4
EDC3-215ENST00000569007 PET100P0DJ07 73 aa12.53□□□□□ -0.4
EDC3-215ENST00000569007 FAM222AQ5U5X8 452 aa12.53□□□□□ -0.4
EDC3-215ENST00000569007 ALG5Q9Y673 324 aa12.53□□□□□ -0.4
EDC3-215ENST00000569007 ZNF705GA8MUZ8 300 aaPredicted RBP12.52□□□□□ -0.41
EDC3-215ENST00000569007 PRM2P04554 102 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms