RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, human

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-223	ENST00000568499	PSMG4	Q5JS54	123 aa		11.12	□□□□□ -0.63
KLHDC4-223	ENST00000568499	RNF141	Q8WVD5	230 aa		11.12	□□□□□ -0.63
KLHDC4-223	ENST00000568499	TMED6	Q8WW62	240 aa		11.12	□□□□□ -0.63
KLHDC4-223	ENST00000568499	RAB24	Q969Q5	203 aa		11.12	□□□□□ -0.63
KLHDC4-223	ENST00000568499	FAM167A-AS1	Q96KT0	104 aa		11.12	□□□□□ -0.63
KLHDC4-223	ENST00000568499	UBQLN2	Q9UHD9	624 aa		11.12	□□□□□ -0.63
KLHDC4-223	ENST00000568499	NBEAL1	Q6ZS30	2694 aa		11.12	□□□□□ -0.63
KLHDC4-223	ENST00000568499	ZNF253	O75346	499 aa		11.11	□□□□□ -0.63
KLHDC4-223	ENST00000568499	CXorf1	O96002	111 aa		11.11	□□□□□ -0.63
KLHDC4-223	ENST00000568499	NBEAP1	P0C6P0	100 aa		11.11	□□□□□ -0.63
KLHDC4-223	ENST00000568499	PYY	P10082	97 aa		11.11	□□□□□ -0.63
KLHDC4-223	ENST00000568499	DEFB131A	P59861	70 aa		11.11	□□□□□ -0.63
KLHDC4-223	ENST00000568499	UBE2L3	P68036	154 aa	Known RBP	11.11	□□□□□ -0.63
KLHDC4-223	ENST00000568499	PDE6H	Q13956	83 aa		11.11	□□□□□ -0.63
KLHDC4-223	ENST00000568499		Q8N1Y9	231 aa		11.11	□□□□□ -0.63
KLHDC4-223	ENST00000568499	MRAP	Q8TCY5	172 aa		11.11	□□□□□ -0.63
KLHDC4-223	ENST00000568499	PHYHIPL	Q96FC7	376 aa		11.11	□□□□□ -0.63
KLHDC4-223	ENST00000568499	MAP6D1	Q9H9H5	199 aa		11.11	□□□□□ -0.63
KLHDC4-223	ENST00000568499	OR10J4	P0C629	311 aa		11.1	□□□□□ -0.63
KLHDC4-223	ENST00000568499	STAG3L2	P0CL84	134 aa		11.1	□□□□□ -0.63
KLHDC4-223	ENST00000568499	STAG3L3	P0CL85	134 aa		11.1	□□□□□ -0.63
KLHDC4-223	ENST00000568499	ODF3L2	Q3SX64	289 aa		11.1	□□□□□ -0.63
KLHDC4-223	ENST00000568499	FAM213B	Q8TBF2	198 aa		11.1	□□□□□ -0.63
KLHDC4-223	ENST00000568499	BLNK	Q8WV28	456 aa		11.1	□□□□□ -0.63
KLHDC4-223	ENST00000568499	AAMDC	Q9H7C9	122 aa		11.1	□□□□□ -0.63
KLHDC4-223	ENST00000568499	ZNF586	Q9NXT0	402 aa		11.1	□□□□□ -0.63
KLHDC4-223	ENST00000568499	TRBV19	A0A075B6N1	114 aa		11.09	□□□□□ -0.63
KLHDC4-223	ENST00000568499		H3BQ15	152 aa		11.09	□□□□□ -0.63
KLHDC4-223	ENST00000568499	TEX46	H3BTG2	121 aa		11.09	□□□□□ -0.63
KLHDC4-223	ENST00000568499		K7EIL1	84 aa		11.09	□□□□□ -0.63
KLHDC4-223	ENST00000568499	SOCS3	O14543	225 aa		11.09	□□□□□ -0.63
KLHDC4-223	ENST00000568499	HMGB3	O15347	200 aa	Known RBP	11.09	□□□□□ -0.63
KLHDC4-223	ENST00000568499	SNRPC	P09234	159 aa	Known RBP	11.09	□□□□□ -0.63
KLHDC4-223	ENST00000568499	ARL14EPL	P0DKL9	152 aa		11.09	□□□□□ -0.63
KLHDC4-223	ENST00000568499	EBLN2	Q6P2I7	272 aa		11.09	□□□□□ -0.63
KLHDC4-223	ENST00000568499	IQCF2	Q8IXL9	164 aa		11.09	□□□□□ -0.63
KLHDC4-223	ENST00000568499	FAM24B	Q8N5W8	94 aa		11.09	□□□□□ -0.63
KLHDC4-223	ENST00000568499	DEFB125	Q8N687	156 aa		11.09	□□□□□ -0.63
KLHDC4-223	ENST00000568499	SRD5A3	Q9H8P0	318 aa		11.09	□□□□□ -0.63
KLHDC4-223	ENST00000568499	ZNF331	Q9NQX6	463 aa	Predicted RBP	11.09	□□□□□ -0.63
KLHDC4-223	ENST00000568499	TMEM167B	Q9NRX6	74 aa		11.09	□□□□□ -0.63
KLHDC4-223	ENST00000568499		H3BTX0	84 aa		11.08	□□□□□ -0.64
KLHDC4-223	ENST00000568499	BOLA2-SMG1P6	H3BVE0	249 aa		11.08	□□□□□ -0.64
KLHDC4-223	ENST00000568499	IGHV4-30-4	P0DP06	118 aa		11.08	□□□□□ -0.64
KLHDC4-223	ENST00000568499	FAM74A1	Q5RGS3	127 aa		11.08	□□□□□ -0.64
KLHDC4-223	ENST00000568499	APRG1	Q8IVJ8	170 aa		11.08	□□□□□ -0.64
KLHDC4-223	ENST00000568499	STH	Q8IWL8	128 aa		11.08	□□□□□ -0.64
KLHDC4-223	ENST00000568499	LYPD1	Q8N2G4	141 aa		11.08	□□□□□ -0.64
KLHDC4-223	ENST00000568499	ZNF738	Q8NE65	137 aa		11.08	□□□□□ -0.64
KLHDC4-223	ENST00000568499	FXYD5	Q96DB9	178 aa		11.08	□□□□□ -0.64
KLHDC4-223	ENST00000568499	SAT2	Q96F10	170 aa	Predicted RBP	11.08	□□□□□ -0.64
KLHDC4-223	ENST00000568499	C17orf77	Q96MU5	243 aa		11.08	□□□□□ -0.64
KLHDC4-223	ENST00000568499	C19orf73	Q9NVV2	129 aa		11.08	□□□□□ -0.64
KLHDC4-223	ENST00000568499	PRELID1	Q9Y255	219 aa		11.08	□□□□□ -0.64
KLHDC4-223	ENST00000568499	MAP1LC3B2	A6NCE7	125 aa		11.07	□□□□□ -0.64
KLHDC4-223	ENST00000568499		A8MZ25	164 aa		11.07	□□□□□ -0.64
KLHDC4-223	ENST00000568499	GCHFR	P30047	84 aa		11.07	□□□□□ -0.64
KLHDC4-223	ENST00000568499	SULT1A2	P50226	295 aa		11.07	□□□□□ -0.64
KLHDC4-223	ENST00000568499	PSG3	Q16557	428 aa		11.07	□□□□□ -0.64
KLHDC4-223	ENST00000568499	MAP1LC3B	Q9GZQ8	125 aa		11.07	□□□□□ -0.64
KLHDC4-223	ENST00000568499	BOLA1	Q9Y3E2	137 aa		11.07	□□□□□ -0.64
KLHDC4-223	ENST00000568499	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	11.06	□□□□□ -0.64
KLHDC4-223	ENST00000568499	TRAV8-2	A0A0B4J237	113 aa		11.06	□□□□□ -0.64
KLHDC4-223	ENST00000568499	EIF3G	O75821	320 aa	Known RBP eCLIP	11.06	□□□□□ -0.64
KLHDC4-223	ENST00000568499	H2AFB1	P0C5Y9	115 aa		11.06	□□□□□ -0.64
KLHDC4-223	ENST00000568499	ACTL10	Q5JWF8	245 aa		11.06	□□□□□ -0.64
KLHDC4-223	ENST00000568499	FOXI2	Q6ZQN5	318 aa		11.06	□□□□□ -0.64
KLHDC4-223	ENST00000568499	RNF182	Q8N6D2	247 aa		11.06	□□□□□ -0.64
KLHDC4-223	ENST00000568499	SFT2D1	Q8WV19	159 aa		11.06	□□□□□ -0.64
KLHDC4-223	ENST00000568499	ZNF503	Q96F45	646 aa		11.06	□□□□□ -0.64
KLHDC4-223	ENST00000568499	WFDC10A	Q9H1F0	79 aa		11.06	□□□□□ -0.64
KLHDC4-223	ENST00000568499	SLC17A3	O00476	420 aa		11.05	□□□□□ -0.64
KLHDC4-223	ENST00000568499	DUSP14	O95147	198 aa	Known RBP	11.05	□□□□□ -0.64
KLHDC4-223	ENST00000568499	HBE1	P02100	147 aa		11.05	□□□□□ -0.64
KLHDC4-223	ENST00000568499	CSN1S1	P47710	185 aa		11.05	□□□□□ -0.64
KLHDC4-223	ENST00000568499	FHIT	P49789	147 aa		11.05	□□□□□ -0.64
KLHDC4-223	ENST00000568499	RAN	P62826	216 aa	Known RBP	11.05	□□□□□ -0.64
KLHDC4-223	ENST00000568499	ZNF726P1	Q15940	193 aa		11.05	□□□□□ -0.64
KLHDC4-223	ENST00000568499	IGFL4	Q6B9Z1	124 aa		11.05	□□□□□ -0.64
KLHDC4-223	ENST00000568499	MBD3L1	Q8WWY6	194 aa		11.05	□□□□□ -0.64
KLHDC4-223	ENST00000568499	MRPL53	Q96EL3	112 aa	Known RBP	11.05	□□□□□ -0.64
KLHDC4-223	ENST00000568499	NDUFB4	O95168	129 aa		11.04	□□□□□ -0.64
KLHDC4-223	ENST00000568499	PPT1	P50897	306 aa		11.04	□□□□□ -0.64
KLHDC4-223	ENST00000568499	APOC4	P55056	127 aa		11.04	□□□□□ -0.64
KLHDC4-223	ENST00000568499	FGF8	P55075	233 aa	Predicted RBP	11.04	□□□□□ -0.64
KLHDC4-223	ENST00000568499	NUTF2	P61970	127 aa	Known RBP	11.04	□□□□□ -0.64
KLHDC4-223	ENST00000568499	ICAM4	Q14773	271 aa		11.04	□□□□□ -0.64
KLHDC4-223	ENST00000568499	OR10J6P	Q8NGY7	276 aa		11.04	□□□□□ -0.64
KLHDC4-223	ENST00000568499	CMTM2	Q8TAZ6	248 aa		11.04	□□□□□ -0.64
KLHDC4-223	ENST00000568499	RXFP4	Q8TDU9	374 aa		11.04	□□□□□ -0.64
KLHDC4-223	ENST00000568499	RPUSD4	Q96CM3	377 aa	Known RBP	11.04	□□□□□ -0.64
KLHDC4-223	ENST00000568499	C20orf173	Q96LM9	149 aa		11.04	□□□□□ -0.64
KLHDC4-223	ENST00000568499	SAV1	Q9H4B6	383 aa	Predicted RBP	11.04	□□□□□ -0.64
KLHDC4-223	ENST00000568499	OTOR	Q9NRC9	128 aa		11.04	□□□□□ -0.64
KLHDC4-223	ENST00000568499	KNCN	A6PVL3	124 aa		11.03	□□□□□ -0.64
KLHDC4-223	ENST00000568499	ZNF705E	A8MWA4	302 aa	Predicted RBP	11.03	□□□□□ -0.64
KLHDC4-223	ENST00000568499	FRMD6-AS1	P0C7T7	363 aa		11.03	□□□□□ -0.64
KLHDC4-223	ENST00000568499	HLA-DRB4	P13762	266 aa		11.03	□□□□□ -0.64
KLHDC4-223	ENST00000568499	ALKAL2	Q6UX46	152 aa		11.03	□□□□□ -0.64
KLHDC4-223	ENST00000568499	SSX7	Q7RTT5	188 aa		11.03	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 54 ms