RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 PFDN5Q99471 154 aa5.84□□□□□ -1.47
SMG1-214ENST00000568038 RNF2Q99496 336 aa5.84□□□□□ -1.47
SMG1-214ENST00000568038 SHANK2-AS3Q9BTD1 123 aa5.84□□□□□ -1.47
SMG1-214ENST00000568038 SCRT1Q9BWW7 348 aa5.84□□□□□ -1.47
SMG1-214ENST00000568038 SLC25A39Q9BZJ4 359 aaPredicted RBP5.84□□□□□ -1.47
SMG1-214ENST00000568038 FAM30AQ9NZY2 134 aa5.84□□□□□ -1.47
SMG1-214ENST00000568038 IGKV3-7A0A075B6H7 116 aa5.83□□□□□ -1.48
SMG1-214ENST00000568038 A0A1W2PS18 150 aa5.83□□□□□ -1.48
SMG1-214ENST00000568038 ZNF98A6NK75 572 aa5.83□□□□□ -1.48
SMG1-214ENST00000568038 H3BRN7 92 aa5.83□□□□□ -1.48
SMG1-214ENST00000568038 BUB3O43684 328 aa5.83□□□□□ -1.48
SMG1-214ENST00000568038 MBP02144 154 aa5.83□□□□□ -1.48
SMG1-214ENST00000568038 S100A7P31151 101 aa5.83□□□□□ -1.48
SMG1-214ENST00000568038 BMI1P35226 326 aa5.83□□□□□ -1.48
SMG1-214ENST00000568038 TMEM41BQ5BJD5 291 aa5.83□□□□□ -1.48
SMG1-214ENST00000568038 C9orf66Q5T8R8 295 aa5.83□□□□□ -1.48
SMG1-214ENST00000568038 C16orf54Q6UWD8 224 aa5.83□□□□□ -1.48
SMG1-214ENST00000568038 ALKAL2Q6UX46 152 aa5.83□□□□□ -1.48
SMG1-214ENST00000568038 MIR17HGQ75NE6 70 aa5.83□□□□□ -1.48
SMG1-214ENST00000568038 S100A7AQ86SG5 101 aa5.83□□□□□ -1.48
SMG1-214ENST00000568038 OR8I2Q8N0Y5 310 aa5.83□□□□□ -1.48
SMG1-214ENST00000568038 MCRIP2Q9BUT9 160 aaKnown RBP5.83□□□□□ -1.48
SMG1-214ENST00000568038 TMEM231Q9H6L2 316 aa5.83□□□□□ -1.48
SMG1-214ENST00000568038 SEPSECSQ9HD40 501 aaKnown RBP5.83□□□□□ -1.48
SMG1-214ENST00000568038 RPRMQ9NS64 109 aa5.83□□□□□ -1.48
SMG1-214ENST00000568038 MLXQ9UH92 298 aa5.83□□□□□ -1.48
SMG1-214ENST00000568038 TRGV11A0A075B6L2 103 aa5.82□□□□□ -1.48
SMG1-214ENST00000568038 HMGB3O15347 200 aaKnown RBP5.82□□□□□ -1.48
SMG1-214ENST00000568038 SNRPCP09234 159 aaKnown RBP5.82□□□□□ -1.48
SMG1-214ENST00000568038 CDC34P49427 236 aaPredicted RBP5.82□□□□□ -1.48
SMG1-214ENST00000568038 RHOBP62745 196 aa5.82□□□□□ -1.48
SMG1-214ENST00000568038 DEFB114Q30KQ6 69 aa5.82□□□□□ -1.48
SMG1-214ENST00000568038 CD300EQ496F6 205 aaPredicted RBP5.82□□□□□ -1.48
SMG1-214ENST00000568038 FAM74A1Q5RGS3 127 aa5.82□□□□□ -1.48
SMG1-214ENST00000568038 C1orf194Q5T5A4 169 aa5.82□□□□□ -1.48
SMG1-214ENST00000568038 EIF5AL1Q6IS14 154 aaKnown RBP5.82□□□□□ -1.48
SMG1-214ENST00000568038 TCF24Q7RTU0 167 aa5.82□□□□□ -1.48
SMG1-214ENST00000568038 RPP25LQ8N5L8 163 aaKnown RBP5.82□□□□□ -1.48
SMG1-214ENST00000568038 GLMPQ8WWB7 406 aa5.82□□□□□ -1.48
SMG1-214ENST00000568038 MRPL32Q9BYC8 188 aaKnown RBP5.82□□□□□ -1.48
SMG1-214ENST00000568038 ACTR3CQ9C0K3 210 aaPredicted RBP5.82□□□□□ -1.48
SMG1-214ENST00000568038 SIGLEC8Q9NYZ4 499 aa5.82□□□□□ -1.48
SMG1-214ENST00000568038 TECRQ9NZ01 308 aaKnown RBP5.82□□□□□ -1.48
SMG1-214ENST00000568038 FUT9Q9Y231 359 aa5.82□□□□□ -1.48
SMG1-214ENST00000568038 IZUMO1RA6ND01 250 aa5.81□□□□□ -1.48
SMG1-214ENST00000568038 ZNF785A8K8V0 405 aa5.81□□□□□ -1.48
SMG1-214ENST00000568038 UMAD1C9J7I0 102 aa5.81□□□□□ -1.48
SMG1-214ENST00000568038 GALR1P47211 349 aa5.81□□□□□ -1.48
SMG1-214ENST00000568038 TFPI2P48307 235 aa5.81□□□□□ -1.48
SMG1-214ENST00000568038 FHITP49789 147 aa5.81□□□□□ -1.48
SMG1-214ENST00000568038 TAS2R45P59539 299 aa5.81□□□□□ -1.48
SMG1-214ENST00000568038 SIGLEC15Q6ZMC9 328 aa5.81□□□□□ -1.48
SMG1-214ENST00000568038 RBPMS2Q6ZRY4 209 aaKnown RBP5.81□□□□□ -1.48
SMG1-214ENST00000568038 TMEM61Q8N0U2 210 aa5.81□□□□□ -1.48
SMG1-214ENST00000568038 GBGT1Q8N5D6 347 aa5.81□□□□□ -1.48
SMG1-214ENST00000568038 STXBP6Q8NFX7 210 aa5.81□□□□□ -1.48
SMG1-214ENST00000568038 FAM213BQ8TBF2 198 aa5.81□□□□□ -1.48
SMG1-214ENST00000568038 SLC25A2Q9BXI2 301 aa5.81□□□□□ -1.48
SMG1-214ENST00000568038 RNF24Q9Y225 148 aa5.81□□□□□ -1.48
SMG1-214ENST00000568038 CTXND1A0A1B0GTU2 59 aa5.8□□□□□ -1.48
SMG1-214ENST00000568038 A0A1B0GV50 99 aa5.8□□□□□ -1.48
SMG1-214ENST00000568038 HELTA6NFD8 242 aa5.8□□□□□ -1.48
SMG1-214ENST00000568038 H3BTX0 84 aa5.8□□□□□ -1.48
SMG1-214ENST00000568038 DNASE2O00115 360 aaPredicted RBP5.8□□□□□ -1.48
SMG1-214ENST00000568038 OR7C2O60412 319 aa5.8□□□□□ -1.48
SMG1-214ENST00000568038 IGLV1-51P01701 117 aa5.8□□□□□ -1.48
SMG1-214ENST00000568038 PYYP10082 97 aa5.8□□□□□ -1.48
SMG1-214ENST00000568038 RPL7P18124 248 aaKnown RBP5.8□□□□□ -1.48
SMG1-214ENST00000568038 SULT1A2P50226 295 aa5.8□□□□□ -1.48
SMG1-214ENST00000568038 INSL3P51460 131 aa5.8□□□□□ -1.48
SMG1-214ENST00000568038 ZNF726P1Q15940 193 aa5.8□□□□□ -1.48
SMG1-214ENST00000568038 GUCA2BQ16661 112 aa5.8□□□□□ -1.48
SMG1-214ENST00000568038 KHDC3LQ587J8 217 aa5.8□□□□□ -1.48
SMG1-214ENST00000568038 FAM90A2PQ658T7 463 aa5.8□□□□□ -1.48
SMG1-214ENST00000568038 LCN15Q6UWW0 184 aa5.8□□□□□ -1.48
SMG1-214ENST00000568038 SSX7Q7RTT5 188 aa5.8□□□□□ -1.48
SMG1-214ENST00000568038 BPIFA4PQ86YQ2 179 aa5.8□□□□□ -1.48
SMG1-214ENST00000568038 PHYHIPLQ96FC7 376 aa5.8□□□□□ -1.48
SMG1-214ENST00000568038 FAM167A-AS1Q96KT0 104 aa5.8□□□□□ -1.48
SMG1-214ENST00000568038 GPR82Q96P67 336 aa5.8□□□□□ -1.48
SMG1-214ENST00000568038 PAXXQ9BUH6 204 aa5.8□□□□□ -1.48
SMG1-214ENST00000568038 OR51M1Q9H341 326 aa5.8□□□□□ -1.48
SMG1-214ENST00000568038 SMAD5-AS1Q9Y6J3 95 aa5.8□□□□□ -1.48
SMG1-214ENST00000568038 COL6A5A8TX70 2615 aa5.79□□□□□ -1.48
SMG1-214ENST00000568038 TRAV25A0A0B4J276 109 aa5.79□□□□□ -1.48
SMG1-214ENST00000568038 ZNF705EA8MWA4 302 aaPredicted RBP5.79□□□□□ -1.48
SMG1-214ENST00000568038 G3V4G9 280 aa5.79□□□□□ -1.48
SMG1-214ENST00000568038 TSPAN4O14817 238 aa5.79□□□□□ -1.48
SMG1-214ENST00000568038 MRPS12O15235 138 aaKnown RBP5.79□□□□□ -1.48
SMG1-214ENST00000568038 CD5P06127 495 aa5.79□□□□□ -1.48
SMG1-214ENST00000568038 OR10J4P0C629 311 aa5.79□□□□□ -1.48
SMG1-214ENST00000568038 ARL14EPLP0DKL9 152 aa5.79□□□□□ -1.48
SMG1-214ENST00000568038 RAB5CP51148 216 aa5.79□□□□□ -1.48
SMG1-214ENST00000568038 FGF8P55075 233 aaPredicted RBP5.79□□□□□ -1.48
SMG1-214ENST00000568038 PAFAH1B2P68402 229 aa5.79□□□□□ -1.48
SMG1-214ENST00000568038 LCN12Q6JVE5 192 aa5.79□□□□□ -1.48
SMG1-214ENST00000568038 TEX261Q6UWH6 196 aa5.79□□□□□ -1.48
SMG1-214ENST00000568038 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.79□□□□□ -1.48
SMG1-214ENST00000568038 DPPA3Q6W0C5 159 aa5.79□□□□□ -1.48
SMG1-214ENST00000568038 PQLC2Q6ZP29 291 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms