RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 COLCA2A8K830 154 aa4.4□□□□□ -1.71
SF3B3-210ENST00000567654 F6UZH7 168 aa4.4□□□□□ -1.71
SF3B3-210ENST00000567654 K7EN84 100 aa4.4□□□□□ -1.71
SF3B3-210ENST00000567654 SLC17A3O00476 420 aa4.4□□□□□ -1.71
SF3B3-210ENST00000567654 TSPAN4O14817 238 aa4.4□□□□□ -1.71
SF3B3-210ENST00000567654 NDUFS6O75380 124 aaKnown RBP4.4□□□□□ -1.71
SF3B3-210ENST00000567654 OR2C1O95371 312 aa4.4□□□□□ -1.71
SF3B3-210ENST00000567654 TRGV3P03979 118 aa4.4□□□□□ -1.71
SF3B3-210ENST00000567654 HIST1H1BP16401 226 aaKnown RBP4.4□□□□□ -1.71
SF3B3-210ENST00000567654 HNF1AP20823 631 aa4.4□□□□□ -1.71
SF3B3-210ENST00000567654 CRYBB3P26998 211 aa4.4□□□□□ -1.71
SF3B3-210ENST00000567654 TAGLN2P37802 199 aaKnown RBP4.4□□□□□ -1.71
SF3B3-210ENST00000567654 TAS2R45P59539 299 aa4.4□□□□□ -1.71
SF3B3-210ENST00000567654 YPEL3P61236 119 aaPredicted RBP4.4□□□□□ -1.71
SF3B3-210ENST00000567654 SUMO2P61956 95 aaKnown RBP4.4□□□□□ -1.71
SF3B3-210ENST00000567654 GNG5P63218 68 aa4.4□□□□□ -1.71
SF3B3-210ENST00000567654 RHEBQ15382 184 aa4.4□□□□□ -1.71
SF3B3-210ENST00000567654 HIST2H2BDQ6DRA6 164 aa4.4□□□□□ -1.71
SF3B3-210ENST00000567654 TOMM20LQ6UXN7 152 aa4.4□□□□□ -1.71
SF3B3-210ENST00000567654 CLEC19AQ6UXS0 136 aa4.4□□□□□ -1.71
SF3B3-210ENST00000567654 ZNF600Q6ZNG1 722 aa4.4□□□□□ -1.71
SF3B3-210ENST00000567654 ZNF329Q86UD4 541 aa4.4□□□□□ -1.71
SF3B3-210ENST00000567654 SIGLECL1Q8N7X8 197 aa4.4□□□□□ -1.71
SF3B3-210ENST00000567654 NANPQ8TBE9 248 aa4.4□□□□□ -1.71
SF3B3-210ENST00000567654 C2CD4CQ8TF44 421 aa4.4□□□□□ -1.71
SF3B3-210ENST00000567654 BLNKQ8WV28 456 aa4.4□□□□□ -1.71
SF3B3-210ENST00000567654 NIPSNAP3BQ9BS92 247 aa4.4□□□□□ -1.71
SF3B3-210ENST00000567654 SHANK2-AS3Q9BTD1 123 aa4.4□□□□□ -1.71
SF3B3-210ENST00000567654 ZNF702PQ9H963 129 aa4.4□□□□□ -1.71
SF3B3-210ENST00000567654 THYN1Q9P016 225 aa4.4□□□□□ -1.71
SF3B3-210ENST00000567654 NAT8Q9UHE5 227 aa4.4□□□□□ -1.71
SF3B3-210ENST00000567654 PITPNC1Q9UKF7 332 aa4.4□□□□□ -1.71
SF3B3-210ENST00000567654 VPREB3Q9UKI3 123 aa4.4□□□□□ -1.71
SF3B3-210ENST00000567654 HECTD1Q9ULT8 2610 aa4.39□□□□□ -1.71
SF3B3-210ENST00000567654 TRAV30A0A087WSZ9 112 aa4.39□□□□□ -1.71
SF3B3-210ENST00000567654 A0A1W2PRE2 83 aa4.39□□□□□ -1.71
SF3B3-210ENST00000567654 ZNF98A6NK75 572 aa4.39□□□□□ -1.71
SF3B3-210ENST00000567654 TGOLN2O43493 480 aa4.39□□□□□ -1.71
SF3B3-210ENST00000567654 ZNF207O43670 478 aaKnown RBP4.39□□□□□ -1.71
SF3B3-210ENST00000567654 PDE6DO43924 150 aa4.39□□□□□ -1.71
SF3B3-210ENST00000567654 IGLV2-8P01709 118 aa4.39□□□□□ -1.71
SF3B3-210ENST00000567654 IGHV3-11P01762 117 aa4.39□□□□□ -1.71
SF3B3-210ENST00000567654 APOHP02749 345 aaPredicted RBP4.39□□□□□ -1.71
SF3B3-210ENST00000567654 CLEC3BP05452 202 aa4.39□□□□□ -1.71
SF3B3-210ENST00000567654 CXCL1P09341 107 aa4.39□□□□□ -1.71
SF3B3-210ENST00000567654 IGLC2P0DOY2 106 aa4.39□□□□□ -1.71
SF3B3-210ENST00000567654 EDN2P20800 178 aa4.39□□□□□ -1.71
SF3B3-210ENST00000567654 RPL35P42766 123 aaKnown RBP4.39□□□□□ -1.71
SF3B3-210ENST00000567654 TPPP2P59282 170 aa4.39□□□□□ -1.71
SF3B3-210ENST00000567654 RPL15P61313 204 aaKnown RBP4.39□□□□□ -1.71
SF3B3-210ENST00000567654 ADIRFQ15847 76 aa4.39□□□□□ -1.71
SF3B3-210ENST00000567654 TMEM241Q24JQ0 296 aa4.39□□□□□ -1.71
SF3B3-210ENST00000567654 RNF212Q495C1 297 aa4.39□□□□□ -1.71
SF3B3-210ENST00000567654 LINC01551Q86U37 167 aa4.39□□□□□ -1.71
SF3B3-210ENST00000567654 PRIMA1Q86XR5 153 aa4.39□□□□□ -1.71
SF3B3-210ENST00000567654 NECAP1Q8NC96 275 aa4.39□□□□□ -1.71
SF3B3-210ENST00000567654 OCC1Q8TAD7 63 aa4.39□□□□□ -1.71
SF3B3-210ENST00000567654 HIST1H2BAQ96A08 127 aa4.39□□□□□ -1.71
SF3B3-210ENST00000567654 EEF1AKMT3Q96AZ1 226 aa4.39□□□□□ -1.71
SF3B3-210ENST00000567654 IGF2BP2-AS1Q96M15 143 aa4.39□□□□□ -1.71
SF3B3-210ENST00000567654 LINC00479Q96M42 142 aa4.39□□□□□ -1.71
SF3B3-210ENST00000567654 TMEM68Q96MH6 324 aa4.39□□□□□ -1.71
SF3B3-210ENST00000567654 TXN2Q99757 166 aa4.39□□□□□ -1.71
SF3B3-210ENST00000567654 SMR3AQ99954 134 aa4.39□□□□□ -1.71
SF3B3-210ENST00000567654 GNB4Q9HAV0 340 aa4.39□□□□□ -1.71
SF3B3-210ENST00000567654 SMAD5-AS1Q9Y6J3 95 aa4.39□□□□□ -1.71
SF3B3-210ENST00000567654 ARL2-SNX15V9GYD0 113 aa4.39□□□□□ -1.71
SF3B3-210ENST00000567654 SETXQ7Z333 2677 aaKnown RBP4.39□□□□□ -1.71
SF3B3-210ENST00000567654 AGRNO00468 2067 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 IGHV3OR16-13A0A075B7E8 117 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 A0A087WWC5 75 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 IGHV3-49A0A0A0MS15 119 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 IGHV3-74A0A0B4J1X5 117 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 TRAV34A0A0B4J273 112 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 IGHV3-66A0A0C4DH42 116 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 FAM223BA6NKX1 122 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 M0QZK8 103 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 PEX7O00628 323 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 CD5LO43866 347 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 TSPAN9O75954 239 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 BRI3O95415 125 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 NBEAP1P0C6P0 100 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 HLA-DMBP28068 263 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 RANP62826 216 aaKnown RBP4.38□□□□□ -1.71
SF3B3-210ENST00000567654 ATP5G2Q06055 141 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 PNRC1Q12796 327 aaPredicted RBP4.38□□□□□ -1.71
SF3B3-210ENST00000567654 OR5I1Q13606 314 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 ELOBQ15370 118 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 CENPWQ5EE01 88 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 UNQ9165/PRO28630Q6UXU0 137 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 FAM223AQ8IWN6 122 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 EXOC3-AS1Q8N2X6 119 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 FAM24BQ8N5W8 94 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 NHLRC2Q8NBF2 726 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 OR5R1Q8NH85 324 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 Q8WTZ3 238 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 DPF1Q92782 380 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 DAZAP1Q96EP5 407 aaKnown RBP4.38□□□□□ -1.71
SF3B3-210ENST00000567654 SGK494Q96LW2 274 aa4.38□□□□□ -1.71
SF3B3-210ENST00000567654 ASCL2Q99929 193 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms