RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 MIR17HGQ75NE6 70 aa9.02□□□□□ -0.97
SF3B3-208ENST00000567250 LINC00528Q8N1L1 170 aa9.02□□□□□ -0.97
SF3B3-208ENST00000567250 LINC00052Q96N35 136 aa9.02□□□□□ -0.97
SF3B3-208ENST00000567250 ZMAT4Q9H898 229 aa9.02□□□□□ -0.97
SF3B3-208ENST00000567250 KIR2DL5BA0A0G2JN68 375 aa9.01□□□□□ -0.97
SF3B3-208ENST00000567250 KIR2DL5BA0A0G2JPC4 375 aa9.01□□□□□ -0.97
SF3B3-208ENST00000567250 CDC34P49427 236 aaPredicted RBP9.01□□□□□ -0.97
SF3B3-208ENST00000567250 RAB2AP61019 212 aa9.01□□□□□ -0.97
SF3B3-208ENST00000567250 ZFP69Q49AA0 526 aa9.01□□□□□ -0.97
SF3B3-208ENST00000567250 ACTL10Q5JWF8 245 aa9.01□□□□□ -0.97
SF3B3-208ENST00000567250 EBLN2Q6P2I7 272 aa9.01□□□□□ -0.97
SF3B3-208ENST00000567250 FOXI2Q6ZQN5 318 aa9.01□□□□□ -0.97
SF3B3-208ENST00000567250 KIR2DL5AQ8N109 375 aa9.01□□□□□ -0.97
SF3B3-208ENST00000567250 OR10G4Q8NGN3 311 aa9.01□□□□□ -0.97
SF3B3-208ENST00000567250 OR10G9Q8NGN4 311 aa9.01□□□□□ -0.97
SF3B3-208ENST00000567250 OR10G7Q8NGN6 311 aa9.01□□□□□ -0.97
SF3B3-208ENST00000567250 KIR2DL5BQ8NHK3 375 aa9.01□□□□□ -0.97
SF3B3-208ENST00000567250 CITED4Q96RK1 184 aa9.01□□□□□ -0.97
SF3B3-208ENST00000567250 SPATA25Q9BR10 227 aa9.01□□□□□ -0.97
SF3B3-208ENST00000567250 ZNF471Q9BX82 626 aaPredicted RBP9.01□□□□□ -0.97
SF3B3-208ENST00000567250 SLC25A2Q9BXI2 301 aa9.01□□□□□ -0.97
SF3B3-208ENST00000567250 SH3BGRL3Q9H299 93 aa9.01□□□□□ -0.97
SF3B3-208ENST00000567250 COL7A1Q02388 2944 aa9.01□□□□□ -0.97
SF3B3-208ENST00000567250 TRAV5A0A0B4J249 113 aa9□□□□□ -0.97
SF3B3-208ENST00000567250 RBMY1BA6NDE4 496 aaKnown RBP9□□□□□ -0.97
SF3B3-208ENST00000567250 RBMY1EA6NEQ0 496 aaKnown RBP9□□□□□ -0.97
SF3B3-208ENST00000567250 UBE2CO00762 179 aa9□□□□□ -0.97
SF3B3-208ENST00000567250 RBMY1DP0C7P1 496 aaKnown RBP9□□□□□ -0.97
SF3B3-208ENST00000567250 HIST1H1EP10412 219 aaKnown RBP9□□□□□ -0.97
SF3B3-208ENST00000567250 SPP1P10451 314 aa9□□□□□ -0.97
SF3B3-208ENST00000567250 TPT1P13693 172 aaKnown RBP9□□□□□ -0.97
SF3B3-208ENST00000567250 HLA-DRB4P13762 266 aa9□□□□□ -0.97
SF3B3-208ENST00000567250 NUTF2P61970 127 aaKnown RBP9□□□□□ -0.97
SF3B3-208ENST00000567250 UBE2L3P68036 154 aaKnown RBP9□□□□□ -0.97
SF3B3-208ENST00000567250 PSG9Q00887 426 aa9□□□□□ -0.97
SF3B3-208ENST00000567250 ZNF124Q15973 351 aa9□□□□□ -0.97
SF3B3-208ENST00000567250 HAGHQ16775 308 aa9□□□□□ -0.97
SF3B3-208ENST00000567250 TMEM41BQ5BJD5 291 aa9□□□□□ -0.97
SF3B3-208ENST00000567250 AKR1C8PQ5T2L2 129 aa9□□□□□ -0.97
SF3B3-208ENST00000567250 FAM122CQ6P4D5 195 aa9□□□□□ -0.97
SF3B3-208ENST00000567250 MORN3Q6PF18 240 aaPredicted RBP9□□□□□ -0.97
SF3B3-208ENST00000567250 PQLC2Q6ZP29 291 aa9□□□□□ -0.97
SF3B3-208ENST00000567250 SBSPONQ8IVN8 264 aa9□□□□□ -0.97
SF3B3-208ENST00000567250 ZNF738Q8NE65 137 aa9□□□□□ -0.97
SF3B3-208ENST00000567250 PAXXQ9BUH6 204 aa9□□□□□ -0.97
SF3B3-208ENST00000567250 OR51M1Q9H341 326 aa9□□□□□ -0.97
SF3B3-208ENST00000567250 ZNF331Q9NQX6 463 aaPredicted RBP9□□□□□ -0.97
SF3B3-208ENST00000567250 HLA-DRB4X5D2U9 266 aa9□□□□□ -0.97
SF3B3-208ENST00000567250 PRKDCP78527 4128 aaKnown RBP8.99□□□□□ -0.97
SF3B3-208ENST00000567250 A0A1B0GVG6 124 aa8.99□□□□□ -0.97
SF3B3-208ENST00000567250 PYYP10082 97 aa8.99□□□□□ -0.97
SF3B3-208ENST00000567250 RPL35AP18077 110 aaKnown RBP8.99□□□□□ -0.97
SF3B3-208ENST00000567250 TMUB2Q71RG4 321 aa8.99□□□□□ -0.97
SF3B3-208ENST00000567250 TRPT1Q86TN4 253 aaKnown RBP8.99□□□□□ -0.97
SF3B3-208ENST00000567250 FAM167A-AS1Q96KT0 104 aa8.99□□□□□ -0.97
SF3B3-208ENST00000567250 C17orf77Q96MU5 243 aa8.99□□□□□ -0.97
SF3B3-208ENST00000567250 ASCL2Q99929 193 aa8.99□□□□□ -0.97
SF3B3-208ENST00000567250 TM2D3Q9BRN9 247 aa8.99□□□□□ -0.97
SF3B3-208ENST00000567250 SAV1Q9H4B6 383 aaPredicted RBP8.99□□□□□ -0.97
SF3B3-208ENST00000567250 AAMDCQ9H7C9 122 aa8.99□□□□□ -0.97
SF3B3-208ENST00000567250 CYTL1Q9NRR1 136 aa8.99□□□□□ -0.97
SF3B3-208ENST00000567250 TGP01266 2768 aa8.99□□□□□ -0.97
SF3B3-208ENST00000567250 TRBV19A0A075B6N1 114 aa8.98□□□□□ -0.97
SF3B3-208ENST00000567250 TRAV8-2A0A0B4J237 113 aa8.98□□□□□ -0.97
SF3B3-208ENST00000567250 KNCNA6PVL3 124 aa8.98□□□□□ -0.97
SF3B3-208ENST00000567250 H3BQ15 152 aa8.98□□□□□ -0.97
SF3B3-208ENST00000567250 SLC17A3O00476 420 aa8.98□□□□□ -0.97
SF3B3-208ENST00000567250 DUSP14O95147 198 aaKnown RBP8.98□□□□□ -0.97
SF3B3-208ENST00000567250 OR10J4P0C629 311 aa8.98□□□□□ -0.97
SF3B3-208ENST00000567250 EIF5AL1Q6IS14 154 aaKnown RBP8.98□□□□□ -0.97
SF3B3-208ENST00000567250 RNF182Q8N6D2 247 aa8.98□□□□□ -0.97
SF3B3-208ENST00000567250 C1QTNF4Q9BXJ3 329 aa8.98□□□□□ -0.97
SF3B3-208ENST00000567250 ACTR3CQ9C0K3 210 aaPredicted RBP8.98□□□□□ -0.97
SF3B3-208ENST00000567250 CSTL1Q9H114 145 aa8.98□□□□□ -0.97
SF3B3-208ENST00000567250 ZNF586Q9NXT0 402 aa8.98□□□□□ -0.97
SF3B3-208ENST00000567250 PRELID1Q9Y255 219 aa8.98□□□□□ -0.97
SF3B3-208ENST00000567250 RFNGQ9Y644 331 aa8.98□□□□□ -0.97
SF3B3-208ENST00000567250 NBEAP1P0C6P0 100 aa8.97□□□□□ -0.97
SF3B3-208ENST00000567250 SEC11BP0C7V7 166 aa8.97□□□□□ -0.97
SF3B3-208ENST00000567250 PSG3Q16557 428 aa8.97□□□□□ -0.97
SF3B3-208ENST00000567250 Q6ZWC4 215 aa8.97□□□□□ -0.97
SF3B3-208ENST00000567250 BAP18Q8IXM2 172 aa8.97□□□□□ -0.97
SF3B3-208ENST00000567250 RPP25LQ8N5L8 163 aaKnown RBP8.97□□□□□ -0.97
SF3B3-208ENST00000567250 STOML3Q8TAV4 291 aa8.97□□□□□ -0.97
SF3B3-208ENST00000567250 BLNKQ8WV28 456 aa8.97□□□□□ -0.97
SF3B3-208ENST00000567250 RNF141Q8WVD5 230 aa8.97□□□□□ -0.97
SF3B3-208ENST00000567250 FXYD5Q96DB9 178 aa8.97□□□□□ -0.97
SF3B3-208ENST00000567250 MRPL53Q96EL3 112 aaKnown RBP8.97□□□□□ -0.97
SF3B3-208ENST00000567250 SAT2Q96F10 170 aaPredicted RBP8.97□□□□□ -0.97
SF3B3-208ENST00000567250 C20orf173Q96LM9 149 aa8.97□□□□□ -0.97
SF3B3-208ENST00000567250 CLUHP3Q96NS8 147 aa8.97□□□□□ -0.97
SF3B3-208ENST00000567250 A0A0J9YX75 114 aa8.96□□□□□ -0.98
SF3B3-208ENST00000567250 CTXND1A0A1B0GTU2 59 aa8.96□□□□□ -0.98
SF3B3-208ENST00000567250 UMAD1C9J7I0 102 aa8.96□□□□□ -0.98
SF3B3-208ENST00000567250 H3BMM0 161 aa8.96□□□□□ -0.98
SF3B3-208ENST00000567250 H3BTX0 84 aa8.96□□□□□ -0.98
SF3B3-208ENST00000567250 CXorf1O96002 111 aa8.96□□□□□ -0.98
SF3B3-208ENST00000567250 CA1P00915 261 aaPredicted RBP8.96□□□□□ -0.98
SF3B3-208ENST00000567250 SNRPCP09234 159 aaKnown RBP8.96□□□□□ -0.98
SF3B3-208ENST00000567250 STAG3L2P0CL84 134 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms