RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 LOC102724200A0A096LPH7 203 aaPredicted RBP15.05■□□□□ -0
RNF40-210ENST00000566811 KIR2DL5BA0A0G2JN68 375 aa15.05■□□□□ -0
RNF40-210ENST00000566811 KIR2DL5BA0A0G2JPC4 375 aa15.05■□□□□ -0
RNF40-210ENST00000566811 SEC11BP0C7V7 166 aa15.05■□□□□ -0
RNF40-210ENST00000566811 TPT1P13693 172 aaKnown RBP15.05■□□□□ -0
RNF40-210ENST00000566811 APOC4P55056 127 aa15.05■□□□□ -0
RNF40-210ENST00000566811 MIR17HGQ75NE6 70 aa15.05■□□□□ -0
RNF40-210ENST00000566811 KIR2DL5AQ8N109 375 aa15.05■□□□□ -0
RNF40-210ENST00000566811 KIR2DL5BQ8NHK3 375 aa15.05■□□□□ -0
RNF40-210ENST00000566811 FAM167A-AS1Q96KT0 104 aa15.05■□□□□ -0
RNF40-210ENST00000566811 OR51M1Q9H341 326 aa15.05■□□□□ -0
RNF40-210ENST00000566811 TRAV5A0A0B4J249 113 aa15.04■□□□□ -0
RNF40-210ENST00000566811 CDC34P49427 236 aaPredicted RBP15.04■□□□□ -0
RNF40-210ENST00000566811 AKR1C8PQ5T2L2 129 aa15.04■□□□□ -0
RNF40-210ENST00000566811 EIF5AL1Q6IS14 154 aaKnown RBP15.04■□□□□ -0
RNF40-210ENST00000566811 LINC00322Q6ZN03 302 aaPredicted RBP15.04■□□□□ -0
RNF40-210ENST00000566811 STHQ8IWL8 128 aa15.04■□□□□ -0
RNF40-210ENST00000566811 PAXXQ9BUH6 204 aa15.04■□□□□ -0
RNF40-210ENST00000566811 ZNF331Q9NQX6 463 aaPredicted RBP15.04■□□□□ -0
RNF40-210ENST00000566811 KMT2CQ8NEZ4 4911 aaKnown RBP15.04■□□□□ -0
RNF40-210ENST00000566811 UMAD1C9J7I0 102 aa15.03■□□□□ -0
RNF40-210ENST00000566811 OR7C2O60412 319 aa15.03■□□□□ -0
RNF40-210ENST00000566811 NHLRC4P0CG21 123 aaPredicted RBP15.03■□□□□ -0
RNF40-210ENST00000566811 RAB2AP61019 212 aa15.03■□□□□ -0
RNF40-210ENST00000566811 PSG9Q00887 426 aa15.03■□□□□ -0
RNF40-210ENST00000566811 LGALSLQ3ZCW2 172 aaPredicted RBP15.03■□□□□ -0
RNF40-210ENST00000566811 FOXI2Q6ZQN5 318 aa15.03■□□□□ -0
RNF40-210ENST00000566811 APRG1Q8IVJ8 170 aa15.03■□□□□ -0
RNF40-210ENST00000566811 BAP18Q8IXM2 172 aa15.03■□□□□ -0
RNF40-210ENST00000566811 C17orf77Q96MU5 243 aa15.03■□□□□ -0
RNF40-210ENST00000566811 TRBV19A0A075B6N1 114 aa15.02■□□□□ -0
RNF40-210ENST00000566811 UBE2CO00762 179 aa15.02■□□□□ -0
RNF40-210ENST00000566811 FAM122CQ6P4D5 195 aa15.02■□□□□ -0
RNF40-210ENST00000566811 SLC51BQ86UW2 128 aa15.02■□□□□ -0
RNF40-210ENST00000566811 SAT2Q96F10 170 aaPredicted RBP15.02■□□□□ -0
RNF40-210ENST00000566811 LINC00052Q96N35 136 aa15.02■□□□□ -0
RNF40-210ENST00000566811 CITED4Q96RK1 184 aa15.02■□□□□ -0
RNF40-210ENST00000566811 ACTR3CQ9C0K3 210 aaPredicted RBP15.02■□□□□ -0
RNF40-210ENST00000566811 HLA-DRB4P13762 266 aa15.01□□□□□ -0.01
RNF40-210ENST00000566811 UBE2L3P68036 154 aaKnown RBP15.01□□□□□ -0.01
RNF40-210ENST00000566811 RPP25LQ8N5L8 163 aaKnown RBP15.01□□□□□ -0.01
RNF40-210ENST00000566811 RNF141Q8WVD5 230 aa15.01□□□□□ -0.01
RNF40-210ENST00000566811 MRPL53Q96EL3 112 aaKnown RBP15.01□□□□□ -0.01
RNF40-210ENST00000566811 CLUHP3Q96NS8 147 aa15.01□□□□□ -0.01
RNF40-210ENST00000566811 SAV1Q9H4B6 383 aaPredicted RBP15.01□□□□□ -0.01
RNF40-210ENST00000566811 PRELID1Q9Y255 219 aa15.01□□□□□ -0.01
RNF40-210ENST00000566811 HLA-DRB4X5D2U9 266 aa15.01□□□□□ -0.01
RNF40-210ENST00000566811 RBMY1BA6NDE4 496 aaKnown RBP15□□□□□ -0.01
RNF40-210ENST00000566811 RBMY1EA6NEQ0 496 aaKnown RBP15□□□□□ -0.01
RNF40-210ENST00000566811 H3BQ15 152 aa15□□□□□ -0.01
RNF40-210ENST00000566811 NBEAP1P0C6P0 100 aa15□□□□□ -0.01
RNF40-210ENST00000566811 RBMY1DP0C7P1 496 aaKnown RBP15□□□□□ -0.01
RNF40-210ENST00000566811 STAG3L2P0CL84 134 aa15□□□□□ -0.01
RNF40-210ENST00000566811 STAG3L3P0CL85 134 aa15□□□□□ -0.01
RNF40-210ENST00000566811 PYYP10082 97 aa15□□□□□ -0.01
RNF40-210ENST00000566811 EBLN2Q6P2I7 272 aa15□□□□□ -0.01
RNF40-210ENST00000566811 MORN3Q6PF18 240 aaPredicted RBP15□□□□□ -0.01
RNF40-210ENST00000566811 DPPA3Q6W0C5 159 aa15□□□□□ -0.01
RNF40-210ENST00000566811 LYPD1Q8N2G4 141 aa15□□□□□ -0.01
RNF40-210ENST00000566811 C9orf62Q8N4C0 152 aa15□□□□□ -0.01
RNF40-210ENST00000566811 AAMDCQ9H7C9 122 aa15□□□□□ -0.01
RNF40-210ENST00000566811 ZNF586Q9NXT0 402 aa15□□□□□ -0.01
RNF40-210ENST00000566811 RFNGQ9Y644 331 aa15□□□□□ -0.01
RNF40-210ENST00000566811 TRAV8-2A0A0B4J237 113 aa14.99□□□□□ -0.01
RNF40-210ENST00000566811 CTXND1A0A1B0GTU2 59 aa14.99□□□□□ -0.01
RNF40-210ENST00000566811 NUTF2P61970 127 aaKnown RBP14.99□□□□□ -0.01
RNF40-210ENST00000566811 CD300CQ08708 224 aa14.99□□□□□ -0.01
RNF40-210ENST00000566811 PSG3Q16557 428 aa14.99□□□□□ -0.01
RNF40-210ENST00000566811 TRPT1Q86TN4 253 aaKnown RBP14.99□□□□□ -0.01
RNF40-210ENST00000566811 FXYD5Q96DB9 178 aa14.99□□□□□ -0.01
RNF40-210ENST00000566811 CXorf1O96002 111 aa14.98□□□□□ -0.01
RNF40-210ENST00000566811 ACTL10Q5JWF8 245 aa14.98□□□□□ -0.01
RNF40-210ENST00000566811 ZNF738Q8NE65 137 aa14.98□□□□□ -0.01
RNF40-210ENST00000566811 RAB24Q969Q5 203 aa14.98□□□□□ -0.01
RNF40-210ENST00000566811 ZMAT4Q9H898 229 aa14.98□□□□□ -0.01
RNF40-210ENST00000566811 H3BMM0 161 aa14.97□□□□□ -0.01
RNF40-210ENST00000566811 SLC17A3O00476 420 aa14.97□□□□□ -0.01
RNF40-210ENST00000566811 DUSP14O95147 198 aaKnown RBP14.97□□□□□ -0.01
RNF40-210ENST00000566811 RAB5CP51148 216 aa14.97□□□□□ -0.01
RNF40-210ENST00000566811 ZNF124Q15973 351 aa14.97□□□□□ -0.01
RNF40-210ENST00000566811 HAGHQ16775 308 aa14.97□□□□□ -0.01
RNF40-210ENST00000566811 SPATA25Q9BR10 227 aa14.97□□□□□ -0.01
RNF40-210ENST00000566811 TM2D3Q9BRN9 247 aa14.97□□□□□ -0.01
RNF40-210ENST00000566811 TMEM167BQ9NRX6 74 aa14.97□□□□□ -0.01
RNF40-210ENST00000566811 A0A0J9YX75 114 aa14.96□□□□□ -0.01
RNF40-210ENST00000566811 OR10J4P0C629 311 aa14.96□□□□□ -0.01
RNF40-210ENST00000566811 ARL14EPLP0DKL9 152 aa14.96□□□□□ -0.01
RNF40-210ENST00000566811 Q6ZWC4 215 aa14.96□□□□□ -0.01
RNF40-210ENST00000566811 SBSPONQ8IVN8 264 aa14.96□□□□□ -0.01
RNF40-210ENST00000566811 BLNKQ8WV28 456 aa14.96□□□□□ -0.01
RNF40-210ENST00000566811 ZNF503Q96F45 646 aa14.96□□□□□ -0.01
RNF40-210ENST00000566811 C20orf173Q96LM9 149 aa14.96□□□□□ -0.01
RNF40-210ENST00000566811 C1QTNF4Q9BXJ3 329 aa14.96□□□□□ -0.01
RNF40-210ENST00000566811 CSTL1Q9H114 145 aa14.96□□□□□ -0.01
RNF40-210ENST00000566811 AGRNO00468 2067 aa14.96□□□□□ -0.02
RNF40-210ENST00000566811 NDUFB4O95168 129 aa14.95□□□□□ -0.02
RNF40-210ENST00000566811 FAM74A1Q5RGS3 127 aa14.95□□□□□ -0.02
RNF40-210ENST00000566811 RNF182Q8N6D2 247 aa14.95□□□□□ -0.02
RNF40-210ENST00000566811 TP53TG1Q9Y2A0 90 aa14.95□□□□□ -0.02
RNF40-210ENST00000566811 KNCNA6PVL3 124 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms