RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 AGPAT2O15120 278 aa12.96□□□□□ -0.33
USB1-213ENST00000566292 LYRM1O43325 122 aa12.96□□□□□ -0.33
USB1-213ENST00000566292 HIST1H1AQ02539 215 aaPredicted RBP12.96□□□□□ -0.33
USB1-213ENST00000566292 MGST2Q99735 147 aa12.96□□□□□ -0.33
USB1-213ENST00000566292 GGACTQ9BVM4 153 aa12.96□□□□□ -0.33
USB1-213ENST00000566292 PKHD1P08F94 4074 aa12.96□□□□□ -0.34
USB1-213ENST00000566292 A0A1B0GVY2 172 aa12.95□□□□□ -0.34
USB1-213ENST00000566292 GOSR2O14653 212 aa12.95□□□□□ -0.34
USB1-213ENST00000566292 RTL8CO15255 209 aa12.95□□□□□ -0.34
USB1-213ENST00000566292 AZU1P20160 251 aa12.95□□□□□ -0.34
USB1-213ENST00000566292 PXDC1Q5TGL8 231 aa12.95□□□□□ -0.34
USB1-213ENST00000566292 TMEM88Q6PEY1 159 aa12.95□□□□□ -0.34
USB1-213ENST00000566292 LINC00305Q7Z4B0 112 aa12.95□□□□□ -0.34
USB1-213ENST00000566292 S100A7AQ86SG5 101 aa12.95□□□□□ -0.34
USB1-213ENST00000566292 ZNF546Q86UE3 836 aa12.95□□□□□ -0.34
USB1-213ENST00000566292 UBE2DNLQ8IWF7 75 aa12.95□□□□□ -0.34
USB1-213ENST00000566292 LRRC20Q8TCA0 184 aa12.95□□□□□ -0.34
USB1-213ENST00000566292 KRTAP17-1Q9BYP8 105 aa12.95□□□□□ -0.34
USB1-213ENST00000566292 PLAC8L1A1L4L8 177 aa12.94□□□□□ -0.34
USB1-213ENST00000566292 TCRBP04435 133 aa12.94□□□□□ -0.34
USB1-213ENST00000566292 SNRPCP09234 159 aaKnown RBP12.94□□□□□ -0.34
USB1-213ENST00000566292 TSPOP30536 169 aa12.94□□□□□ -0.34
USB1-213ENST00000566292 B2MP61769 119 aa12.94□□□□□ -0.34
USB1-213ENST00000566292 RHOBP62745 196 aa12.94□□□□□ -0.34
USB1-213ENST00000566292 LGALS9BQ3B8N2 356 aa12.94□□□□□ -0.34
USB1-213ENST00000566292 MORN5Q5VZ52 161 aa12.94□□□□□ -0.34
USB1-213ENST00000566292 TMEM37Q8WXS4 190 aa12.94□□□□□ -0.34
USB1-213ENST00000566292 C11orf1Q9H5F2 150 aa12.94□□□□□ -0.34
USB1-213ENST00000566292 LSM5Q9Y4Y9 91 aaKnown RBP12.94□□□□□ -0.34
USB1-213ENST00000566292 KIAA1109Q2LD37 5005 aa12.94□□□□□ -0.34
USB1-213ENST00000566292 PKD1P98161 4303 aa12.94□□□□□ -0.34
USB1-213ENST00000566292 TRAV6A0A075B6T7 132 aa12.93□□□□□ -0.34
USB1-213ENST00000566292 LYRM9A8MSI8 78 aa12.93□□□□□ -0.34
USB1-213ENST00000566292 RPUSD4Q96CM3 377 aaKnown RBP12.93□□□□□ -0.34
USB1-213ENST00000566292 SEC22CQ9BRL7 303 aa12.93□□□□□ -0.34
USB1-213ENST00000566292 ZNF331Q9NQX6 463 aaPredicted RBP12.93□□□□□ -0.34
USB1-213ENST00000566292 IGLV2-18A0A075B6J9 118 aa12.92□□□□□ -0.34
USB1-213ENST00000566292 FAM25EA8MYX2 175 aa12.92□□□□□ -0.34
USB1-213ENST00000566292 L7N2F9 121 aa12.92□□□□□ -0.34
USB1-213ENST00000566292 CXCL2P19875 107 aa12.92□□□□□ -0.34
USB1-213ENST00000566292 VAMP2P63027 116 aa12.92□□□□□ -0.34
USB1-213ENST00000566292 ZNF846Q147U1 533 aa12.92□□□□□ -0.34
USB1-213ENST00000566292 FCN2Q15485 313 aa12.92□□□□□ -0.34
USB1-213ENST00000566292 LCN15Q6UWW0 184 aa12.92□□□□□ -0.34
USB1-213ENST00000566292 Q6ZR54 194 aa12.92□□□□□ -0.34
USB1-213ENST00000566292 ZNF431Q8TF32 576 aaPredicted RBP12.92□□□□□ -0.34
USB1-213ENST00000566292 RNF24Q9Y225 148 aa12.92□□□□□ -0.34
USB1-213ENST00000566292 PRSS29PA6NIE9 313 aa12.91□□□□□ -0.34
USB1-213ENST00000566292 H3BTX0 84 aa12.91□□□□□ -0.34
USB1-213ENST00000566292 SLC17A3O00476 420 aa12.91□□□□□ -0.34
USB1-213ENST00000566292 COX7A2P2O60397 106 aa12.91□□□□□ -0.34
USB1-213ENST00000566292 DEFB130BP0DP73 79 aa12.91□□□□□ -0.34
USB1-213ENST00000566292 DEFB130AP0DP74 79 aa12.91□□□□□ -0.34
USB1-213ENST00000566292 OPCMLQ14982 345 aa12.91□□□□□ -0.34
USB1-213ENST00000566292 RNF212Q495C1 297 aa12.91□□□□□ -0.34
USB1-213ENST00000566292 BPIFA4PQ86YQ2 179 aa12.91□□□□□ -0.34
USB1-213ENST00000566292 TMEM256Q8N2U0 113 aa12.91□□□□□ -0.34
USB1-213ENST00000566292 LINC01587Q99440 93 aa12.91□□□□□ -0.34
USB1-213ENST00000566292 SLC50A1Q9BRV3 221 aa12.91□□□□□ -0.34
USB1-213ENST00000566292 NUDT15Q9NV35 164 aa12.91□□□□□ -0.34
USB1-213ENST00000566292 PPP1R14DQ9NXH3 145 aa12.91□□□□□ -0.34
USB1-213ENST00000566292 C5orf51A6NDU8 294 aa12.9□□□□□ -0.34
USB1-213ENST00000566292 FAM24AA6NFZ4 105 aa12.9□□□□□ -0.34
USB1-213ENST00000566292 CST7O76096 145 aa12.9□□□□□ -0.34
USB1-213ENST00000566292 CAMLGP49069 296 aa12.9□□□□□ -0.34
USB1-213ENST00000566292 BCAP31P51572 246 aa12.9□□□□□ -0.34
USB1-213ENST00000566292 CAV2P51636 162 aa12.9□□□□□ -0.34
USB1-213ENST00000566292 C10orf113Q5VZT2 155 aa12.9□□□□□ -0.34
USB1-213ENST00000566292 MIC13Q5XKP0 118 aa12.9□□□□□ -0.34
USB1-213ENST00000566292 PRAC2D3DTV9 90 aa12.89□□□□□ -0.35
USB1-213ENST00000566292 IGLC2P0DOY2 106 aa12.89□□□□□ -0.35
USB1-213ENST00000566292 CDKN1BP46527 198 aa12.89□□□□□ -0.35
USB1-213ENST00000566292 TAS2R60P59551 318 aa12.89□□□□□ -0.35
USB1-213ENST00000566292 KIR3DS1Q14943 382 aa12.89□□□□□ -0.35
USB1-213ENST00000566292 NRARPQ7Z6K4 114 aa12.89□□□□□ -0.35
USB1-213ENST00000566292 C12orf45Q8N5I9 185 aaPredicted RBP12.89□□□□□ -0.35
USB1-213ENST00000566292 C15orf53Q8NAA6 179 aa12.89□□□□□ -0.35
USB1-213ENST00000566292 C2orf50Q96LR7 162 aa12.89□□□□□ -0.35
USB1-213ENST00000566292 NDUFA13Q9P0J0 144 aa12.89□□□□□ -0.35
USB1-213ENST00000566292 TRAV5A0A0B4J249 113 aa12.88□□□□□ -0.35
USB1-213ENST00000566292 H3BQ15 152 aa12.88□□□□□ -0.35
USB1-213ENST00000566292 HTN1P15515 57 aa12.88□□□□□ -0.35
USB1-213ENST00000566292 SAT2Q96F10 170 aaPredicted RBP12.88□□□□□ -0.35
USB1-213ENST00000566292 PARD6GQ9BYG4 376 aaPredicted RBP12.88□□□□□ -0.35
USB1-213ENST00000566292 DNAJC4Q9NNZ3 241 aa12.88□□□□□ -0.35
USB1-213ENST00000566292 WDR83OSQ9Y284 106 aa12.88□□□□□ -0.35
USB1-213ENST00000566292 H2AFB2P0C5Z0 115 aa12.87□□□□□ -0.35
USB1-213ENST00000566292 IL15RAQ13261 267 aa12.87□□□□□ -0.35
USB1-213ENST00000566292 VWC2Q2TAL6 325 aa12.87□□□□□ -0.35
USB1-213ENST00000566292 C16orf74Q96GX8 76 aa12.87□□□□□ -0.35
USB1-213ENST00000566292 CCDC32Q9BV29 185 aa12.87□□□□□ -0.35
USB1-213ENST00000566292 UQCC1Q9NVA1 299 aa12.87□□□□□ -0.35
USB1-213ENST00000566292 DYNC1H1Q14204 4646 aaKnown RBP12.86□□□□□ -0.35
USB1-213ENST00000566292 DNAH11Q96DT5 4516 aa12.86□□□□□ -0.35
USB1-213ENST00000566292 IGSF23A1L1A6 192 aa12.86□□□□□ -0.35
USB1-213ENST00000566292 F5H768 121 aa12.86□□□□□ -0.35
USB1-213ENST00000566292 S100A10P60903 97 aa12.86□□□□□ -0.35
USB1-213ENST00000566292 RAB31Q13636 194 aa12.86□□□□□ -0.35
USB1-213ENST00000566292 RAB32Q13637 225 aa12.86□□□□□ -0.35
USB1-213ENST00000566292 Q6ZRG5 221 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 168.7 ms