RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 CKLFQ9UBR5 152 aa2.35□□□□□ -2.03
CNOT1-209ENST00000566240 PKIGQ9Y2B9 76 aa2.35□□□□□ -2.03
CNOT1-209ENST00000566240 ZNF407Q9C0G0 2248 aa2.35□□□□□ -2.03
CNOT1-209ENST00000566240 SRCAPQ6ZRS2 3230 aa2.35□□□□□ -2.03
CNOT1-209ENST00000566240 DNAH12Q6ZR08 3092 aa2.34□□□□□ -2.03
CNOT1-209ENST00000566240 TRAV36DV7A0A075B6V5 113 aa2.34□□□□□ -2.03
CNOT1-209ENST00000566240 TRAV27A0A087WT01 109 aa2.34□□□□□ -2.03
CNOT1-209ENST00000566240 A0A087WUJ7 227 aa2.34□□□□□ -2.03
CNOT1-209ENST00000566240 TRGV5A0A0B4J1U4 118 aa2.34□□□□□ -2.03
CNOT1-209ENST00000566240 MUC21A0A0G2JKD1 596 aa2.34□□□□□ -2.03
CNOT1-209ENST00000566240 MUC21A0A140T8X8 626 aa2.34□□□□□ -2.03
CNOT1-209ENST00000566240 PQLC2LA1A4F0 135 aa2.34□□□□□ -2.03
CNOT1-209ENST00000566240 FAM25AB3EWG3 89 aa2.34□□□□□ -2.03
CNOT1-209ENST00000566240 FAM25CB3EWG5 89 aa2.34□□□□□ -2.03
CNOT1-209ENST00000566240 FAM25GB3EWG6 89 aa2.34□□□□□ -2.03
CNOT1-209ENST00000566240 M0R129 80 aa2.34□□□□□ -2.03
CNOT1-209ENST00000566240 CD2P06729 351 aa2.34□□□□□ -2.03
CNOT1-209ENST00000566240 HTR1AP08908 422 aa2.34□□□□□ -2.03
CNOT1-209ENST00000566240 FKBP2P26885 142 aaKnown RBP2.34□□□□□ -2.03
CNOT1-209ENST00000566240 NCS1P62166 190 aa2.34□□□□□ -2.03
CNOT1-209ENST00000566240 POLR2GP62487 172 aaKnown RBP eCLIP2.34□□□□□ -2.03
CNOT1-209ENST00000566240 BTG2P78543 158 aa2.34□□□□□ -2.03
CNOT1-209ENST00000566240 EIF3IQ13347 325 aaKnown RBP2.34□□□□□ -2.03
CNOT1-209ENST00000566240 MIAQ16674 131 aa2.34□□□□□ -2.03
CNOT1-209ENST00000566240 C3orf33Q6P1S2 294 aa2.34□□□□□ -2.03
CNOT1-209ENST00000566240 GRINAQ7Z429 371 aa2.34□□□□□ -2.03
CNOT1-209ENST00000566240 LHFPL1Q86WI0 220 aa2.34□□□□□ -2.03
CNOT1-209ENST00000566240 C20orf196Q8IYI0 205 aa2.34□□□□□ -2.03
CNOT1-209ENST00000566240 PFN4Q8NHR9 129 aa2.34□□□□□ -2.03
CNOT1-209ENST00000566240 TSLPQ969D9 159 aa2.34□□□□□ -2.03
CNOT1-209ENST00000566240 ULBP3Q9BZM4 244 aa2.34□□□□□ -2.03
CNOT1-209ENST00000566240 PRO3102Q9H379 93 aa2.34□□□□□ -2.03
CNOT1-209ENST00000566240 RERGLQ9H628 205 aa2.34□□□□□ -2.03
CNOT1-209ENST00000566240 PAQR5Q9NXK6 330 aaPredicted RBP2.34□□□□□ -2.03
CNOT1-209ENST00000566240 GNG8Q9UK08 70 aa2.34□□□□□ -2.03
CNOT1-209ENST00000566240 CENPFP49454 3210 aa2.34□□□□□ -2.04
CNOT1-209ENST00000566240 BPTFQ12830 3046 aa2.34□□□□□ -2.04
CNOT1-209ENST00000566240 PDE4DIPQ5VU43 2346 aa2.33□□□□□ -2.04
CNOT1-209ENST00000566240 TRDV1A0A1B0GX56 115 aa2.33□□□□□ -2.04
CNOT1-209ENST00000566240 KNCNA6PVL3 124 aa2.33□□□□□ -2.04
CNOT1-209ENST00000566240 C10orf142B7Z368 130 aa2.33□□□□□ -2.04
CNOT1-209ENST00000566240 FNDC10F2Z333 226 aa2.33□□□□□ -2.04
CNOT1-209ENST00000566240 I3L521 148 aa2.33□□□□□ -2.04
CNOT1-209ENST00000566240 J3QLW9 94 aa2.33□□□□□ -2.04
CNOT1-209ENST00000566240 J3QRE1 110 aa2.33□□□□□ -2.04
CNOT1-209ENST00000566240 FADS1O60427 444 aa2.33□□□□□ -2.04
CNOT1-209ENST00000566240 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
CNOT1-209ENST00000566240 C1QCP02747 245 aa2.33□□□□□ -2.04
CNOT1-209ENST00000566240 CD14P08571 375 aa2.33□□□□□ -2.04
CNOT1-209ENST00000566240 SRP19P09132 144 aaKnown RBP2.33□□□□□ -2.04
CNOT1-209ENST00000566240 FAUP35544 74 aaKnown RBP2.33□□□□□ -2.04
CNOT1-209ENST00000566240 SNRPD2P62316 118 aaKnown RBP2.33□□□□□ -2.04
CNOT1-209ENST00000566240 GLO1Q04760 184 aa2.33□□□□□ -2.04
CNOT1-209ENST00000566240 AKR1C1Q04828 323 aa2.33□□□□□ -2.04
CNOT1-209ENST00000566240 SPCS2Q15005 226 aa2.33□□□□□ -2.04
CNOT1-209ENST00000566240 SS18Q15532 418 aa2.33□□□□□ -2.04
CNOT1-209ENST00000566240 GRK1Q15835 563 aa2.33□□□□□ -2.04
CNOT1-209ENST00000566240 GUK1Q16774 197 aa2.33□□□□□ -2.04
CNOT1-209ENST00000566240 ZNF791Q3KP31 576 aaPredicted RBP2.33□□□□□ -2.04
CNOT1-209ENST00000566240 CCDC58Q4VC31 144 aa2.33□□□□□ -2.04
CNOT1-209ENST00000566240 C1orf140Q5VVS0 124 aa2.33□□□□□ -2.04
CNOT1-209ENST00000566240 HACD4Q5VWC8 232 aa2.33□□□□□ -2.04
CNOT1-209ENST00000566240 ZNF283Q8N7M2 679 aa2.33□□□□□ -2.04
CNOT1-209ENST00000566240 PLPP5Q8NEB5 264 aa2.33□□□□□ -2.04
CNOT1-209ENST00000566240 OR4D11Q8NGI4 311 aa2.33□□□□□ -2.04
CNOT1-209ENST00000566240 OR5J2Q8NH18 312 aa2.33□□□□□ -2.04
CNOT1-209ENST00000566240 GPX7Q96SL4 187 aaPredicted RBP2.33□□□□□ -2.04
CNOT1-209ENST00000566240 DDA1Q9BW61 102 aa2.33□□□□□ -2.04
CNOT1-209ENST00000566240 XAGE1AQ9HD64 81 aa2.33□□□□□ -2.04
CNOT1-209ENST00000566240 GLTPQ9NZD2 209 aa2.33□□□□□ -2.04
CNOT1-209ENST00000566240 BOKQ9UMX3 212 aaPredicted RBP2.33□□□□□ -2.04
CNOT1-209ENST00000566240 RBM7Q9Y580 266 aaKnown RBP2.33□□□□□ -2.04
CNOT1-209ENST00000566240 IER3IP1Q9Y5U9 82 aa2.33□□□□□ -2.04
CNOT1-209ENST00000566240 PCDH15Q96QU1 1955 aa2.32□□□□□ -2.04
CNOT1-209ENST00000566240 KIAA1549Q9HCM3 1950 aa2.32□□□□□ -2.04
CNOT1-209ENST00000566240 TMEM212A6NML5 194 aa2.32□□□□□ -2.04
CNOT1-209ENST00000566240 CDC42EP2O14613 210 aa2.32□□□□□ -2.04
CNOT1-209ENST00000566240 SULT1C4O75897 302 aa2.32□□□□□ -2.04
CNOT1-209ENST00000566240 APOC1P02654 83 aa2.32□□□□□ -2.04
CNOT1-209ENST00000566240 ZNF705DP0CH99 300 aaPredicted RBP2.32□□□□□ -2.04
CNOT1-209ENST00000566240 SPI1P17947 270 aa2.32□□□□□ -2.04
CNOT1-209ENST00000566240 CSRP1P21291 193 aaKnown RBP2.32□□□□□ -2.04
CNOT1-209ENST00000566240 HSD11B1P28845 292 aa2.32□□□□□ -2.04
CNOT1-209ENST00000566240 S100A7P31151 101 aa2.32□□□□□ -2.04
CNOT1-209ENST00000566240 CSN1S1P47710 185 aa2.32□□□□□ -2.04
CNOT1-209ENST00000566240 MRPS10P82664 201 aaKnown RBP2.32□□□□□ -2.04
CNOT1-209ENST00000566240 RPL18Q07020 188 aaKnown RBP2.32□□□□□ -2.04
CNOT1-209ENST00000566240 EDDM3AQ14507 147 aa2.32□□□□□ -2.04
CNOT1-209ENST00000566240 CDK5R1Q15078 307 aa2.32□□□□□ -2.04
CNOT1-209ENST00000566240 HSD17B12Q53GQ0 312 aa2.32□□□□□ -2.04
CNOT1-209ENST00000566240 AKIRIN2Q53H80 203 aa2.32□□□□□ -2.04
CNOT1-209ENST00000566240 RPL22L1Q6P5R6 122 aaKnown RBP2.32□□□□□ -2.04
CNOT1-209ENST00000566240 SLC35E3Q7Z769 313 aa2.32□□□□□ -2.04
CNOT1-209ENST00000566240 AKAP14Q86UN6 197 aa2.32□□□□□ -2.04
CNOT1-209ENST00000566240 LRRC28Q86X40 367 aaPredicted RBP2.32□□□□□ -2.04
CNOT1-209ENST00000566240 ZNF676Q8N7Q3 588 aa2.32□□□□□ -2.04
CNOT1-209ENST00000566240 GDPD1Q8N9F7 314 aa2.32□□□□□ -2.04
CNOT1-209ENST00000566240 OR8D4Q8NGM9 314 aa2.32□□□□□ -2.04
CNOT1-209ENST00000566240 OR5AK2Q8NH90 309 aa2.32□□□□□ -2.04
CNOT1-209ENST00000566240 TMEM203Q969S6 136 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms