RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 SMIM21Q3B7S5 101 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 TPTE2P1Q5T6R2 138 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 FBXW9Q5XUX1 488 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 Q6ZT83 130 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 SIGLECL1Q8N7X8 197 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 UQCR10Q9UDW1 63 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 NCKAP5O14513 1909 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 ADGRG4Q8IZF6 3080 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 YLPM1P49750 1951 aaKnown RBP3.2□□□□□ -1.9
LINC00561-201ENST00000565815 C12orf77C9JDV5 145 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 SIRPB1O00241 398 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 ISLRO14498 428 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 S1PR2O95136 353 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 HBZP02008 142 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 OR4A8P0C604 315 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 CCNOP22674 350 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 NPPCP23582 126 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 GCHFRP30047 84 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 G6PCP35575 357 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 CFHR2P36980 270 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 VDAC2P45880 294 aaPredicted RBP3.2□□□□□ -1.9
LINC00561-201ENST00000565815 POU2AF1Q16633 256 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 Q8N7P7 452 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 OR4S2Q8NH73 311 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 GGTLC1Q9BX51 225 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 MRPL32Q9BYC8 188 aaKnown RBP3.2□□□□□ -1.9
LINC00561-201ENST00000565815 CLN8Q9UBY8 286 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 ZFP30Q9Y2G7 519 aa3.2□□□□□ -1.9
LINC00561-201ENST00000565815 CRYBG3Q68DQ2 2970 aa3.19□□□□□ -1.9
LINC00561-201ENST00000565815 A0A1W2PRE2 83 aa3.19□□□□□ -1.9
LINC00561-201ENST00000565815 ZNF253O75346 499 aa3.19□□□□□ -1.9
LINC00561-201ENST00000565815 SNRPCP09234 159 aaKnown RBP3.19□□□□□ -1.9
LINC00561-201ENST00000565815 ZNF25P17030 456 aaPredicted RBP3.19□□□□□ -1.9
LINC00561-201ENST00000565815 HLA-DRB5Q30154 266 aa3.19□□□□□ -1.9
LINC00561-201ENST00000565815 TIGITQ495A1 244 aa3.19□□□□□ -1.9
LINC00561-201ENST00000565815 SPATA46Q5T0L3 261 aa3.19□□□□□ -1.9
LINC00561-201ENST00000565815 ACP7Q6ZNF0 438 aa3.19□□□□□ -1.9
LINC00561-201ENST00000565815 FAM231DQ6ZW35 169 aa3.19□□□□□ -1.9
LINC00561-201ENST00000565815 MYPOPQ86VE0 399 aaPredicted RBP3.19□□□□□ -1.9
LINC00561-201ENST00000565815 BAGE3Q86Y29 109 aa3.19□□□□□ -1.9
LINC00561-201ENST00000565815 BAGE2Q86Y30 109 aa3.19□□□□□ -1.9
LINC00561-201ENST00000565815 ORAOV1Q8WV07 137 aa3.19□□□□□ -1.9
LINC00561-201ENST00000565815 KCNS1Q96KK3 526 aa3.19□□□□□ -1.9
LINC00561-201ENST00000565815 SAMD10Q9BYL1 202 aa3.19□□□□□ -1.9
LINC00561-201ENST00000565815 ENY2Q9NPA8 101 aa3.19□□□□□ -1.9
LINC00561-201ENST00000565815 ZNF257Q9Y2Q1 563 aa3.19□□□□□ -1.9
LINC00561-201ENST00000565815 MRPS16Q9Y3D3 137 aaKnown RBP3.19□□□□□ -1.9
LINC00561-201ENST00000565815 TBL2Q9Y4P3 447 aaKnown RBP3.19□□□□□ -1.9
LINC00561-201ENST00000565815 SOX21Q9Y651 276 aaPredicted RBP3.19□□□□□ -1.9
LINC00561-201ENST00000565815 COL6A5A8TX70 2615 aa3.19□□□□□ -1.9
LINC00561-201ENST00000565815 E7EQL1 145 aa3.19□□□□□ -1.9
LINC00561-201ENST00000565815 INS-IGF2F8WCM5 200 aa3.19□□□□□ -1.9
LINC00561-201ENST00000565815 GPX1P07203 203 aa3.19□□□□□ -1.9
LINC00561-201ENST00000565815 ARL14EPLP0DKL9 152 aa3.19□□□□□ -1.9
LINC00561-201ENST00000565815 RPL30P62888 115 aaKnown RBP3.19□□□□□ -1.9
LINC00561-201ENST00000565815 PRAMEF5Q5TYX0 476 aa3.19□□□□□ -1.9
LINC00561-201ENST00000565815 PRAMEF6Q5VXH4 476 aa3.19□□□□□ -1.9
LINC00561-201ENST00000565815 ZNF705AQ6ZN79 300 aaPredicted RBP3.19□□□□□ -1.9
LINC00561-201ENST00000565815 ATP5L2Q7Z4Y8 100 aa3.19□□□□□ -1.9
LINC00561-201ENST00000565815 OR1L6Q8NGR2 347 aa3.19□□□□□ -1.9
LINC00561-201ENST00000565815 OR1L1Q8NH94 360 aa3.19□□□□□ -1.9
LINC00561-201ENST00000565815 TMEM186Q96B77 213 aa3.19□□□□□ -1.9
LINC00561-201ENST00000565815 TMEM208Q9BTX3 173 aa3.19□□□□□ -1.9
LINC00561-201ENST00000565815 OR2J1Q9GZK6 312 aa3.19□□□□□ -1.9
LINC00561-201ENST00000565815 NRN1Q9NPD7 142 aa3.19□□□□□ -1.9
LINC00561-201ENST00000565815 PRNDQ9UKY0 176 aa3.19□□□□□ -1.9
LINC00561-201ENST00000565815 JMJD1CQ15652 2540 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 PPIAL4EA0A075B759 164 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 LOC105371242A0A075B767 164 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 PPIAL4CA0A0B4J2A2 164 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 C17orf98A8MV24 154 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 PPIAL4DF5H284 164 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 FCN1O00602 326 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 RAMP3O60896 148 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 RHBDL1O75783 438 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 PPIAL4FP0DN26 164 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 FCGR2BP31994 310 aaPredicted RBP3.18□□□□□ -1.9
LINC00561-201ENST00000565815 ATP5G3P48201 142 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 GNG4P50150 75 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 PRRX1P54821 245 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 HSPE1P61604 102 aaKnown RBP3.18□□□□□ -1.9
LINC00561-201ENST00000565815 ZNF816Q0VGE8 651 aaPredicted RBP3.18□□□□□ -1.9
LINC00561-201ENST00000565815 RIGQ13278 110 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 CD164L2Q6UWJ8 174 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 MDP1Q86V88 176 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 CACNG8Q8WXS5 425 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 ZNF488Q96MN9 340 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 MGST2Q99735 147 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 HSPB9Q9BQS6 159 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 SPXQ9BT56 116 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 MCRIP2Q9BUT9 160 aaKnown RBP3.18□□□□□ -1.9
LINC00561-201ENST00000565815 PATZ1Q9HBE1 687 aaKnown RBP3.18□□□□□ -1.9
LINC00561-201ENST00000565815 LPAR2Q9HBW0 351 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 ABCA1O95477 2261 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 IGLV4-3A0A075B6K6 122 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 SMIM27A0A1W2PRY6 76 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 IZUMO1RA6ND01 250 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 HELTA6NFD8 242 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 C15orf65H3BRN8 121 aa3.18□□□□□ -1.9
LINC00561-201ENST00000565815 ZNF324O75467 553 aaPredicted RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms