RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 HLA-DRB4X5D2U9 266 aa12.32□□□□□ -0.44
RNF40-206ENST00000564260 DNAH9Q9NYC9 4486 aa12.32□□□□□ -0.44
RNF40-206ENST00000564260 C1QBP02746 253 aa12.31□□□□□ -0.44
RNF40-206ENST00000564260 ATP6V0CP27449 155 aa12.31□□□□□ -0.44
RNF40-206ENST00000564260 KHDC3LQ587J8 217 aa12.31□□□□□ -0.44
RNF40-206ENST00000564260 GCSAMLQ5JQS6 135 aa12.31□□□□□ -0.44
RNF40-206ENST00000564260 MORN5Q5VZ52 161 aa12.31□□□□□ -0.44
RNF40-206ENST00000564260 EBLN2Q6P2I7 272 aa12.31□□□□□ -0.44
RNF40-206ENST00000564260 AKAP14Q86UN6 197 aa12.31□□□□□ -0.44
RNF40-206ENST00000564260 HSD17B11Q8NBQ5 300 aa12.31□□□□□ -0.44
RNF40-206ENST00000564260 MRPL53Q96EL3 112 aaKnown RBP12.31□□□□□ -0.44
RNF40-206ENST00000564260 HYLS1Q96M11 299 aa12.31□□□□□ -0.44
RNF40-206ENST00000564260 ZNF331Q9NQX6 463 aaPredicted RBP12.31□□□□□ -0.44
RNF40-206ENST00000564260 A0A1W2PPV4 95 aa12.3□□□□□ -0.44
RNF40-206ENST00000564260 H3BMM0 161 aa12.3□□□□□ -0.44
RNF40-206ENST00000564260 PSG9Q00887 426 aa12.3□□□□□ -0.44
RNF40-206ENST00000564260 RPL7L1Q6DKI1 246 aaKnown RBP12.3□□□□□ -0.44
RNF40-206ENST00000564260 PQLC2Q6ZP29 291 aa12.3□□□□□ -0.44
RNF40-206ENST00000564260 OR11H4Q8NGC9 324 aa12.3□□□□□ -0.44
RNF40-206ENST00000564260 SAT2Q96F10 170 aaPredicted RBP12.3□□□□□ -0.44
RNF40-206ENST00000564260 FAM167A-AS1Q96KT0 104 aa12.3□□□□□ -0.44
RNF40-206ENST00000564260 LINC00052Q96N35 136 aa12.3□□□□□ -0.44
RNF40-206ENST00000564260 C1QTNF4Q9BXJ3 329 aa12.3□□□□□ -0.44
RNF40-206ENST00000564260 PRELID1Q9Y255 219 aa12.3□□□□□ -0.44
RNF40-206ENST00000564260 TGP01266 2768 aa12.3□□□□□ -0.44
RNF40-206ENST00000564260 TRBV19A0A075B6N1 114 aa12.29□□□□□ -0.44
RNF40-206ENST00000564260 TRAV8-2A0A0B4J237 113 aa12.29□□□□□ -0.44
RNF40-206ENST00000564260 KANTRA0A1W2PQU2 76 aa12.29□□□□□ -0.44
RNF40-206ENST00000564260 SMLR1H3BR10 107 aa12.29□□□□□ -0.44
RNF40-206ENST00000564260 DUSP14O95147 198 aaKnown RBP12.29□□□□□ -0.44
RNF40-206ENST00000564260 PSG3Q16557 428 aa12.29□□□□□ -0.44
RNF40-206ENST00000564260 ACTL10Q5JWF8 245 aa12.29□□□□□ -0.44
RNF40-206ENST00000564260 LYPD1Q8N2G4 141 aa12.29□□□□□ -0.44
RNF40-206ENST00000564260 OR10G4Q8NGN3 311 aa12.29□□□□□ -0.44
RNF40-206ENST00000564260 OR10G9Q8NGN4 311 aa12.29□□□□□ -0.44
RNF40-206ENST00000564260 OR10G7Q8NGN6 311 aa12.29□□□□□ -0.44
RNF40-206ENST00000564260 ASCL2Q99929 193 aa12.29□□□□□ -0.44
RNF40-206ENST00000564260 SLC25A2Q9BXI2 301 aa12.29□□□□□ -0.44
RNF40-206ENST00000564260 OR51M1Q9H341 326 aa12.29□□□□□ -0.44
RNF40-206ENST00000564260 U3KQK5 164 aa12.29□□□□□ -0.44
RNF40-206ENST00000564260 TRAV5A0A0B4J249 113 aa12.28□□□□□ -0.44
RNF40-206ENST00000564260 A0A0J9YX75 114 aa12.28□□□□□ -0.44
RNF40-206ENST00000564260 A8MTW9 85 aa12.28□□□□□ -0.44
RNF40-206ENST00000564260 BCL2L11O43521 198 aa12.28□□□□□ -0.44
RNF40-206ENST00000564260 C4BPBP20851 252 aa12.28□□□□□ -0.44
RNF40-206ENST00000564260 MIR17HGQ75NE6 70 aa12.28□□□□□ -0.44
RNF40-206ENST00000564260 PAXXQ9BUH6 204 aa12.28□□□□□ -0.44
RNF40-206ENST00000564260 CYTL1Q9NRR1 136 aa12.28□□□□□ -0.44
RNF40-206ENST00000564260 COL7A1Q02388 2944 aa12.27□□□□□ -0.44
RNF40-206ENST00000564260 H3BQ15 152 aa12.27□□□□□ -0.45
RNF40-206ENST00000564260 RPL35AP18077 110 aaKnown RBP12.27□□□□□ -0.45
RNF40-206ENST00000564260 ZNF124Q15973 351 aa12.27□□□□□ -0.45
RNF40-206ENST00000564260 RCHY1Q96PM5 261 aa12.27□□□□□ -0.45
RNF40-206ENST00000564260 ZNF586Q9NXT0 402 aa12.27□□□□□ -0.45
RNF40-206ENST00000564260 OR7C2O60412 319 aa12.26□□□□□ -0.45
RNF40-206ENST00000564260 AMBPP02760 352 aa12.26□□□□□ -0.45
RNF40-206ENST00000564260 NBEAP1P0C6P0 100 aa12.26□□□□□ -0.45
RNF40-206ENST00000564260 CDC34P49427 236 aaPredicted RBP12.26□□□□□ -0.45
RNF40-206ENST00000564260 ZNF738Q8NE65 137 aa12.26□□□□□ -0.45
RNF40-206ENST00000564260 RNF141Q8WVD5 230 aa12.26□□□□□ -0.45
RNF40-206ENST00000564260 RNF183Q96D59 192 aa12.26□□□□□ -0.45
RNF40-206ENST00000564260 AAMDCQ9H7C9 122 aa12.26□□□□□ -0.45
RNF40-206ENST00000564260 KNCNA6PVL3 124 aa12.25□□□□□ -0.45
RNF40-206ENST00000564260 UMAD1C9J7I0 102 aa12.25□□□□□ -0.45
RNF40-206ENST00000564260 PFDN1O60925 122 aa12.25□□□□□ -0.45
RNF40-206ENST00000564260 SEC11BP0C7V7 166 aa12.25□□□□□ -0.45
RNF40-206ENST00000564260 RPP25LQ8N5L8 163 aaKnown RBP12.25□□□□□ -0.45
RNF40-206ENST00000564260 ARL6IP6Q8N6S5 226 aa12.25□□□□□ -0.45
RNF40-206ENST00000564260 STOML3Q8TAV4 291 aa12.25□□□□□ -0.45
RNF40-206ENST00000564260 FXYD5Q96DB9 178 aa12.25□□□□□ -0.45
RNF40-206ENST00000564260 C20orf173Q96LM9 149 aa12.25□□□□□ -0.45
RNF40-206ENST00000564260 ACTR3CQ9C0K3 210 aaPredicted RBP12.25□□□□□ -0.45
RNF40-206ENST00000564260 SPRY2O43597 315 aa12.24□□□□□ -0.45
RNF40-206ENST00000564260 CA1P00915 261 aaPredicted RBP12.24□□□□□ -0.45
RNF40-206ENST00000564260 STAG3L2P0CL84 134 aa12.24□□□□□ -0.45
RNF40-206ENST00000564260 STAG3L3P0CL85 134 aa12.24□□□□□ -0.45
RNF40-206ENST00000564260 PYYP10082 97 aa12.24□□□□□ -0.45
RNF40-206ENST00000564260 RAB2AP61019 212 aa12.24□□□□□ -0.45
RNF40-206ENST00000564260 UBE2L3P68036 154 aaKnown RBP12.24□□□□□ -0.45
RNF40-206ENST00000564260 AKR1C8PQ5T2L2 129 aa12.24□□□□□ -0.45
RNF40-206ENST00000564260 EIF5AL1Q6IS14 154 aaKnown RBP12.24□□□□□ -0.45
RNF40-206ENST00000564260 TMUB2Q71RG4 321 aa12.24□□□□□ -0.45
RNF40-206ENST00000564260 OR8A1Q8NGG7 326 aa12.24□□□□□ -0.45
RNF40-206ENST00000564260 RPUSD4Q96CM3 377 aaKnown RBP12.24□□□□□ -0.45
RNF40-206ENST00000564260 SH3BGRL3Q9H299 93 aa12.24□□□□□ -0.45
RNF40-206ENST00000564260 hCG_2014768A0A024R1R8 64 aa12.23□□□□□ -0.45
RNF40-206ENST00000564260 SLC17A3O00476 420 aa12.23□□□□□ -0.45
RNF40-206ENST00000564260 NDUFB4O95168 129 aa12.23□□□□□ -0.45
RNF40-206ENST00000564260 TPT1P13693 172 aaKnown RBP12.23□□□□□ -0.45
RNF40-206ENST00000564260 FAM122CQ6P4D5 195 aa12.23□□□□□ -0.45
RNF40-206ENST00000564260 DPPA3Q6W0C5 159 aa12.23□□□□□ -0.45
RNF40-206ENST00000564260 OVOL2Q9BRP0 275 aa12.23□□□□□ -0.45
RNF40-206ENST00000564260 ZNF471Q9BX82 626 aaPredicted RBP12.23□□□□□ -0.45
RNF40-206ENST00000564260 CTXND1A0A1B0GTU2 59 aa12.22□□□□□ -0.45
RNF40-206ENST00000564260 CXorf1O96002 111 aa12.22□□□□□ -0.45
RNF40-206ENST00000564260 FAM74A1Q5RGS3 127 aa12.22□□□□□ -0.45
RNF40-206ENST00000564260 GDF5OSQ5U4N7 250 aa12.22□□□□□ -0.45
RNF40-206ENST00000564260 BAP18Q8IXM2 172 aa12.22□□□□□ -0.45
RNF40-206ENST00000564260 RNF182Q8N6D2 247 aa12.22□□□□□ -0.45
RNF40-206ENST00000564260 OR10J6PQ8NGY7 276 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms